Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 3.0e-258 894.8 503 100.0
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 3.4e-124 449.5 538 56.3
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 1.1e-119 434.5 547 51.0
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 4.7e-110 402.5 485 51.8
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 8.9e-109 398.3 532 47.6
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 2.4e-106 390.2 538 49.6
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 7.0e-106 388.7 555 46.5
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 4.9e-99 365.9 546 45.6
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 4.3e-95 352.8 522 50.4
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 4.3e-95 352.8 522 50.4
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 6.8e-93 345.5 519 48.6
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 4.1e-90 336.3 523 50.1
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 5.4e-90 335.9 545 44.0
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 2.1e-89 334.0 590 43.1
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 3.3e-79 300.1 610 39.8
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 2.8e-78 297.0 518 43.4
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 6.9e-77 292.4 523 43.4
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 4.4e-76 289.7 535 42.2
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 5.8e-76 289.3 522 43.3
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 5.8e-76 289.3 522 43.3
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 9.9e-76 288.5 538 42.0
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 1.1e-71 275.0 527 43.3
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 1.1e-71 275.0 527 43.3
Sp7g02650 Schrenkiella parvula HOM05D005710 ORTHO05D004657 3.4e-60 236.9 308 53.9
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 8.4e-51 205.7 290 48.3
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 1.3e-48 198.4 524 35.3
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 1.7e-38 164.9 318 40.3
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 6.3e-38 162.9 415 34.0
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 2.4e-37 161.0 449 34.3
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 3.1e-37 160.6 399 34.8
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 1.3e-35 155.2 426 33.3
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 1.3e-35 155.2 451 30.8
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 1.7e-35 154.8 384 35.9
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 5.0e-35 153.3 288 40.3
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 3.2e-34 150.6 419 32.0
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 2.7e-33 147.5 404 33.7
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.7e-33 147.5 308 36.7
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 6.1e-33 146.4 324 35.5
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 7.9e-33 146.0 446 32.1
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.8e-32 144.8 425 31.1
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 3.0e-32 144.1 271 39.5
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 6.7e-32 142.9 327 34.6
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.5e-31 141.7 347 34.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 4.4e-31 140.2 270 38.1
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 5.7e-31 139.8 277 37.9
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.3e-30 138.7 335 35.5
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.2e-30 137.9 342 34.8
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.2e-30 137.9 342 34.8
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 6.3e-30 136.3 329 34.3
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 8.2e-30 136.0 287 36.6
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 3.1e-29 134.0 423 32.2
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 5.3e-29 133.3 291 39.9
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 9.1e-29 132.5 284 37.3
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 1.2e-28 132.1 274 35.8
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 2.6e-28 131.0 375 32.8
BcaC06g33686 Brassica carinata HOM05D005710 ORTHO05D004657 3.5e-28 130.6 345 34.8
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 4.5e-28 130.2 250 38.4
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 5.9e-28 129.8 365 33.7
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 8.5e-27 125.9 258 38.4
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 1.9e-26 124.8 346 32.9
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 7.2e-26 122.9 164 43.9
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 2.1e-25 121.3 298 33.9
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 3.6e-25 120.6 288 35.4
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 8.0e-25 119.4 432 31.7
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 2.3e-24 117.9 444 28.8
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 3.0e-24 117.5 280 35.4
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 3.0e-24 117.5 283 35.7
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 6.7e-24 116.3 189 40.2
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 1.1e-23 115.5 112 58.0
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 1.1e-23 115.5 319 33.5
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.5e-23 115.2 246 36.6
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 2.0e-23 114.8 404 30.0
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 2.0e-23 114.8 276 35.5
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 2.6e-23 114.4 457 29.3
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 3.3e-23 114.0 327 32.1
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 4.4e-23 113.6 285 36.5
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 5.7e-23 113.2 276 34.4
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 5.7e-23 113.2 276 34.8
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 5.7e-23 113.2 290 33.4
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 7.4e-23 112.8 213 36.6
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 1.3e-22 112.1 250 34.4
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 4.8e-22 110.2 305 30.8
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 8.2e-22 109.4 283 31.8
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 1.4e-21 108.6 299 27.8
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 1.4e-21 108.6 355 30.7
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 1.4e-21 108.6 425 28.9
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 1.4e-21 108.6 398 30.4
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 2.4e-21 107.8 344 32.0
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 7.0e-21 106.3 399 28.8
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 1.6e-20 105.1 167 38.3
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 1.6e-20 105.1 323 29.7
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 3.5e-20 104.0 283 33.9
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 3.5e-20 104.0 327 32.4
A07p19920 Brassica napus HOM05D005710 ORTHO05D004657 5.9e-20 103.2 121 57.0
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 5.9e-20 103.2 417 29.0
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 7.7e-20 102.8 227 37.0
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 7.7e-20 102.8 323 31.0
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 7.7e-20 102.8 138 44.2
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 1.3e-19 102.1 291 35.4
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 2.2e-19 101.3 167 41.9
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.2e-19 101.3 425 29.6
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 2.2e-19 101.3 284 33.1
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 6.5e-19 99.8 293 30.7
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 3.6e-17 94.0 290 28.3
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 1.4e-16 92.0 154 38.3
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 1.8e-16 91.7 265 33.2
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 4.0e-16 90.5 385 26.8
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 4.0e-16 90.5 273 30.8
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 4.0e-16 90.5 237 32.5
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 6.7e-16 89.7 103 48.5
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 9.7e-15 85.9 142 39.4
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 4.8e-14 83.6 190 32.6
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 1.2e-12 79.0 170 33.5
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 5.9e-12 76.6 101 42.6
AL3G48400 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 1.7e-11 75.1 57 63.2
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 1.9e-10 71.6 83 50.6
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 1.9e-10 71.6 120 42.5
BcaC06g30873 Brassica carinata HOM05D005710 ORTHO05D004657 1.6e-09 68.6 117 41.0
Sp7g02640 Schrenkiella parvula HOM05D005710 ORTHO05D004657 1.8e-08 65.1 79 53.2
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 8.3e-06 56.2 48 58.3


User provided reference genes

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