Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G16050 Aethionema arabicum HOM05D003794 ORTHO05D004464 2.2e-105 385.6 186 100.0
Sp1g08790 Schrenkiella parvula HOM05D003794 ORTHO05D004464 5.6e-85 317.8 186 81.7
AT1G10155 Arabidopsis thaliana HOM05D003794 ORTHO05D004464 9.0e-83 310.5 186 79.0
Carub.0001s0957 Capsella rubella HOM05D003794 ORTHO05D004464 9.0e-83 310.5 187 79.7
Thhalv10008847m.g Eutrema salsugineum HOM05D003794 ORTHO05D004464 1.2e-82 310.1 186 79.6
BcaC05g24803 Brassica carinata HOM05D003794 ORTHO05D004464 2.0e-82 309.3 185 78.9
BcaC05g24807 Brassica carinata HOM05D003794 ORTHO05D004464 7.6e-82 307.4 186 78.0
C05p08300 Brassica napus HOM05D003794 ORTHO05D004464 7.6e-82 307.4 186 78.0
BolC5t29580H Brassica oleracea HOM05D003794 ORTHO05D004464 7.6e-82 307.4 186 78.0
A06p06810 Brassica napus HOM05D003794 ORTHO05D004464 1.1e-80 303.5 186 77.4
BraA06t23895Z Brassica rapa HOM05D003794 ORTHO05D004464 1.1e-80 303.5 186 77.4
AL1G20850 Arabidopsis lyrata HOM05D003794 ORTHO05D004464 2.4e-80 302.4 187 77.5
Thhalv10009870m.g Eutrema salsugineum HOM05D003794 ORTHO05D004464 2.1e-76 289.3 186 73.1
Carub.0001s2960 Capsella rubella HOM05D003794 ORTHO05D004464 1.8e-75 286.2 179 73.7
Sp1g27020 Schrenkiella parvula HOM05D003794 ORTHO05D004464 1.2e-74 283.5 179 73.7
AL1G49280 Arabidopsis lyrata HOM05D003794 ORTHO05D004464 2.2e-73 279.3 179 73.7
BcaC05g27150 Brassica carinata HOM05D003794 ORTHO05D004464 1.4e-72 276.6 179 73.7
C05p30370 Brassica napus HOM05D003794 ORTHO05D004464 1.4e-72 276.6 179 73.7
BraA09t39035Z Brassica rapa HOM05D003794 ORTHO05D004464 4.3e-69 265.0 175 71.4
Aa31LG2G15150 Aethionema arabicum HOM05D003794 ORTHO05D004464 9.7e-69 263.8 180 68.9
BolC5t31776H Brassica oleracea HOM05D003794 ORTHO05D004464 1.1e-67 260.4 170 72.9
A09p35040 Brassica napus HOM05D003794 ORTHO05D004464 3.1e-67 258.8 175 69.7
BcaB07g32782 Brassica carinata HOM05D003794 ORTHO05D004464 1.0e-65 253.8 169 71.0
THA.LOC104814363 Tarenaya hassleriana HOM05D003794 ORTHO05D004464 3.4e-58 228.8 185 61.1
AT1G31200 Arabidopsis thaliana HOM05D003794 ORTHO05D004464 7.4e-53 211.1 133 78.2
CARHR030680 Cardamine hirsuta HOM05D003794 ORTHO05D004464 4.8e-52 208.4 135 74.1
THA.LOC104798619 Tarenaya hassleriana HOM05D003794 ORTHO05D004464 5.5e-40 168.3 134 60.4
Gohir.D06G145100 Gossypium hirsutum HOM05D003794 ORTHO05D004464 2.4e-35 152.9 180 43.3
Gorai.010G168800 Gossypium raimondii HOM05D003794 ORTHO05D004464 2.4e-35 152.9 180 43.3
COL.COLO4_30982 Corchorus olitorius HOM05D003794 ORTHO05D004464 4.1e-35 152.1 182 40.1
Gohir.A06G140900 Gossypium hirsutum HOM05D003794 ORTHO05D004464 1.2e-34 150.6 182 44.0
Ciclev10016974m.g Citrus clementina HOM05D003794 ORTHO05D004464 7.7e-34 147.9 180 45.0
Duzib235G0411 Durio zibethinus HOM05D003794 ORTHO05D004464 1.3e-33 147.1 181 42.0
Potri.012G120340 Populus trichocarpa HOM05D003794 ORTHO05D004464 3.8e-33 145.6 176 43.8
Lj1A1144T44 Lonicera japonica HOM05D003794 ORTHO05D004464 1.9e-32 143.3 183 44.3
MD05G1254300 Malus domestica HOM05D003794 ORTHO05D004464 2.5e-32 142.9 181 42.0
QL11p018066 Quercus lobata HOM05D003794 ORTHO05D004464 2.5e-32 142.9 181 44.2
TWI38G0727 Tripterygium wilfordii HOM05D003794 ORTHO05D004464 3.2e-32 142.5 179 42.5
CiPaw.09G078700 Carya illinoinensis HOM05D003794 ORTHO05D004464 5.5e-32 141.7 178 43.8
Cc09_g06260 Coffea canephora HOM05D003794 ORTHO05D004464 7.2e-32 141.4 182 41.2
Cc09_g06270 Coffea canephora HOM05D003794 ORTHO05D004464 7.2e-32 141.4 186 41.9
Potri.015G120200 Populus trichocarpa HOM05D003794 ORTHO05D004464 1.6e-31 140.2 179 40.2
Atru.chr10.446 Acer truncatum HOM05D003794 ORTHO05D004464 2.1e-31 139.8 176 39.8
Duzib160G0344 Durio zibethinus HOM05D003794 ORTHO05D004464 2.1e-31 139.8 188 41.0
ClCG01G009280 Citrullus lanatus HOM05D003794 ORTHO05D004464 2.7e-31 139.4 182 43.4
Hma1.2p1_0040F.1_g025090 Hydrangea macrophylla HOM05D003794 ORTHO05D004464 2.7e-31 139.4 179 42.5
Sed0014796 Sechium edule HOM05D003794 ORTHO05D004464 3.6e-31 139.0 169 43.8
ClCG01G009250 Citrullus lanatus HOM05D003794 ORTHO05D004464 6.1e-31 138.3 182 39.6
Thecc.06G140300 Theobroma cacao HOM05D003794 ORTHO05D004464 6.1e-31 138.3 181 42.5
Peaxi162Scf00367g00015 Petunia axillaris HOM05D003794 ORTHO05D004464 8.0e-31 137.9 178 39.3
FAN16G1323 Fragaria x ananassa HOM05D003794 ORTHO05D004464 1.4e-30 137.1 176 42.6
ClCG01G009290 Citrullus lanatus HOM05D003794 ORTHO05D004464 1.8e-30 136.7 182 41.2
Thecc.06G141300 Theobroma cacao HOM05D003794 ORTHO05D004464 2.3e-30 136.3 177 41.2
Cpa.g.sc135.26 Carica papaya HOM05D003794 ORTHO05D004464 5.2e-30 135.2 197 39.1
Oeu050060.1 Olea europaea HOM05D003794 ORTHO05D004464 5.2e-30 135.2 180 41.1
MSTRG.7585 Avicennia marina HOM05D003794 ORTHO05D004464 6.8e-30 134.8 177 39.5
Nitab4.5_0000767g0010 Nicotiana tabacum HOM05D003794 ORTHO05D004464 6.8e-30 134.8 178 40.4
Sed0015410 Sechium edule HOM05D003794 ORTHO05D004464 6.8e-30 134.8 180 41.1
Sed0012046 Sechium edule HOM05D003794 ORTHO05D004464 1.5e-29 133.7 157 45.9
Haze_06027 Corylus avellana HOM05D003794 ORTHO05D004464 2.0e-29 133.3 175 41.1
Haze_06028 Corylus avellana HOM05D003794 ORTHO05D004464 2.0e-29 133.3 175 41.1
CsaV3_1G046600 Cucumis sativus L. HOM05D003794 ORTHO05D004464 2.0e-29 133.3 161 45.3
FvH4_3g12160 Fragaria vesca HOM05D003794 ORTHO05D004464 2.0e-29 133.3 193 39.9
CsaV3_1G046430 Cucumis sativus L. HOM05D003794 ORTHO05D004464 3.4e-29 132.5 185 40.5
Sabra15G0137100 Salix brachista HOM05D003794 ORTHO05D004464 3.4e-29 132.5 184 42.4
Cpa.g.sc135.30 Carica papaya HOM05D003794 ORTHO05D004464 4.4e-29 132.1 162 43.8
Prupe.4G110400 Prunus persica HOM05D003794 ORTHO05D004464 5.7e-29 131.7 189 37.6
ClCG01G009260 Citrullus lanatus HOM05D003794 ORTHO05D004464 7.5e-29 131.3 183 38.3
MELO3C021767.2 Cucumis melo HOM05D003794 ORTHO05D004464 9.8e-29 131.0 185 40.5
MELO3C021768.2 Cucumis melo HOM05D003794 ORTHO05D004464 9.8e-29 131.0 180 42.2
Migut.M01972 Erythranthe guttata HOM05D003794 ORTHO05D004464 9.8e-29 131.0 151 42.4
RcHm_v2.0_Chr5g0019901 Rosa chinensis HOM05D003794 ORTHO05D004464 9.8e-29 131.0 181 39.8
MD10G1234400 Malus domestica HOM05D003794 ORTHO05D004464 1.3e-28 130.6 183 40.4
CANSAT35G2022 Cannabis sativa HOM05D003794 ORTHO05D004464 1.7e-28 130.2 193 40.4
Cfa000722 Carpinus fangiana HOM05D003794 ORTHO05D004464 1.7e-28 130.2 184 37.0
MELO3C021763.2 Cucumis melo HOM05D003794 ORTHO05D004464 1.7e-28 130.2 186 37.1
Nitab4.5_0006444g0020 Nicotiana tabacum HOM05D003794 ORTHO05D004464 1.7e-28 130.2 178 39.9
Potri.015G120100 Populus trichocarpa HOM05D003794 ORTHO05D004464 2.2e-28 129.8 172 40.7
RcHm_v2.0_Chr5g0019921 Rosa chinensis HOM05D003794 ORTHO05D004464 2.8e-28 129.4 185 40.0
SalBow8G0239 Salvia bowleyana HOM05D003794 ORTHO05D004464 3.7e-28 129.0 164 39.6
SalBow8G3375 Salvia bowleyana HOM05D003794 ORTHO05D004464 3.7e-28 129.0 164 39.6
Gohir.A09G025201 Gossypium hirsutum HOM05D003794 ORTHO05D004464 4.8e-28 128.6 177 37.3
FAN25G3487 Fragaria x ananassa HOM05D003794 ORTHO05D004464 6.3e-28 128.3 182 40.7
Sed0017866 Sechium edule HOM05D003794 ORTHO05D004464 8.3e-28 127.9 180 41.7
Gorai.006G028700 Gossypium raimondii HOM05D003794 ORTHO05D004464 1.1e-27 127.5 177 37.3
Manes.16G059600 Manihot esculenta HOM05D003794 ORTHO05D004464 1.1e-27 127.5 180 41.1
Sed0013970 Sechium edule HOM05D003794 ORTHO05D004464 1.1e-27 127.5 186 39.2
Sopen02g010020 Solanum pennellii HOM05D003794 ORTHO05D004464 1.1e-27 127.5 183 36.6
Potri.012G120280 Populus trichocarpa HOM05D003794 ORTHO05D004464 1.4e-27 127.1 173 41.0
CsaV3_1G046610 Cucumis sativus L. HOM05D003794 ORTHO05D004464 1.8e-27 126.7 187 40.1
SalBow8G4157 Salvia bowleyana HOM05D003794 ORTHO05D004464 2.4e-27 126.3 178 37.1
CSS0016108 Camellia sinensis var. sinensis HOM05D003794 ORTHO05D004464 3.1e-27 125.9 150 42.0
ClCG01G009270 Citrullus lanatus HOM05D003794 ORTHO05D004464 3.1e-27 125.9 187 37.4
Oeu008720.1 Olea europaea HOM05D003794 ORTHO05D004464 3.1e-27 125.9 154 44.8
PGR042G1704 Punica granatum HOM05D003794 ORTHO05D004464 4.1e-27 125.6 184 42.4
SalBow8G2459 Salvia bowleyana HOM05D003794 ORTHO05D004464 7.0e-27 124.8 178 36.5
CsaV3_1G046440 Cucumis sativus L. HOM05D003794 ORTHO05D004464 2.0e-26 123.2 186 36.6
Dinv05961 Davidia involucrata HOM05D003794 ORTHO05D004464 2.0e-26 123.2 183 38.8
CAN.G39.22 Capsicum annuum HOM05D003794 ORTHO05D004464 2.7e-26 122.9 178 38.8
Gohir.D09G024500 Gossypium hirsutum HOM05D003794 ORTHO05D004464 3.5e-26 122.5 177 37.9
Migut.E01640 Erythranthe guttata HOM05D003794 ORTHO05D004464 5.9e-26 121.7 190 33.7
GSVIVG01012089001 Vitis vinifera HOM05D003794 ORTHO05D004464 5.9e-26 121.7 160 41.9
GSVIVG01012092001 Vitis vinifera HOM05D003794 ORTHO05D004464 5.9e-26 121.7 180 40.6
CsaV3_6G053030 Cucumis sativus L. HOM05D003794 ORTHO05D004464 1.0e-25 120.9 159 41.5
Solyc02g031740.3 Solanum lycopersicum HOM05D003794 ORTHO05D004464 1.0e-25 120.9 183 35.5
Potri.012G120160 Populus trichocarpa HOM05D003794 ORTHO05D004464 2.3e-25 119.8 170 38.2
Migut.E00890 Erythranthe guttata HOM05D003794 ORTHO05D004464 2.9e-25 119.4 189 32.8
Sabra15G0137000 Salix brachista HOM05D003794 ORTHO05D004464 3.8e-25 119.0 165 43.0
GSVIVG01012087001 Vitis vinifera HOM05D003794 ORTHO05D004464 3.8e-25 119.0 180 40.0
RcHm_v2.0_Chr5g0019931 Rosa chinensis HOM05D003794 ORTHO05D004464 6.6e-25 118.2 182 37.9
Aqoxy4G00780 Aquilegia oxysepala HOM05D003794 ORTHO05D004464 1.1e-24 117.5 188 38.3
Aqoxy4G00782 Aquilegia oxysepala HOM05D003794 ORTHO05D004464 1.5e-24 117.1 177 36.2
CARHR010260 Cardamine hirsuta HOM05D003794 ORTHO05D004464 2.5e-24 116.3 58 89.7
Gohir.D03G117566 Gossypium hirsutum HOM05D003794 ORTHO05D004464 2.5e-24 116.3 163 38.7
Potri.015G118900 Populus trichocarpa HOM05D003794 ORTHO05D004464 4.2e-24 115.5 159 40.3
MELO3C007006.2 Cucumis melo HOM05D003794 ORTHO05D004464 5.5e-24 115.2 156 41.0
ClCG01G025820 Citrullus lanatus HOM05D003794 ORTHO05D004464 7.2e-24 114.8 187 36.9
Phvul.009G205500 Phaseolus vulgaris HOM05D003794 ORTHO05D004464 1.2e-23 114.0 178 37.6
Solyc02g069065.1 Solanum lycopersicum HOM05D003794 ORTHO05D004464 1.2e-23 114.0 183 34.4
Lj6g0000845 Lotus japonicus HOM05D003794 ORTHO05D004464 2.8e-23 112.8 175 36.6
PSO675G9055 Papaver somniferum HOM05D003794 ORTHO05D004464 2.8e-23 112.8 184 37.5
arahy.Tifrunner.gnm1.ann1.D9MA0I Arachis hypogaea HOM05D003794 ORTHO05D004464 4.7e-23 112.1 175 36.0
Solyc02g069055.1 Solanum lycopersicum HOM05D003794 ORTHO05D004464 4.7e-23 112.1 183 34.4
Actinidia37906 Actinidia chinensis HOM05D003794 ORTHO05D004464 6.1e-23 111.7 166 36.1
PSO675G7591 Papaver somniferum HOM05D003794 ORTHO05D004464 6.1e-23 111.7 186 37.1
Solyc02g069057.1 Solanum lycopersicum HOM05D003794 ORTHO05D004464 8.0e-23 111.3 182 35.7
Sopen02g018160 Solanum pennellii HOM05D003794 ORTHO05D004464 8.0e-23 111.3 183 36.1
CAN.G519.2 Capsicum annuum HOM05D003794 ORTHO05D004464 1.0e-22 110.9 187 32.1
MBI18_g03837_MAGBIO Magnolia biondii HOM05D003794 ORTHO05D004464 1.4e-22 110.5 179 38.5
Glyma.06G221100 Glycine max HOM05D003794 ORTHO05D004464 4.0e-22 109.0 176 38.6
Sopen02g018150 Solanum pennellii HOM05D003794 ORTHO05D004464 5.2e-22 108.6 183 35.5
Actinidia33654 Actinidia chinensis HOM05D003794 ORTHO05D004464 1.5e-21 107.1 155 36.8
Manes.16G059700 Manihot esculenta HOM05D003794 ORTHO05D004464 2.6e-21 106.3 181 37.0
PGSC0003DMG400010357 Solanum tuberosum HOM05D003794 ORTHO05D004464 2.6e-21 106.3 193 33.7
arahy.Tifrunner.gnm1.ann1.I4JYF5 Arachis hypogaea HOM05D003794 ORTHO05D004464 4.4e-21 105.5 156 36.5
Medtr0026s0010 Medicago truncatula HOM05D003794 ORTHO05D004464 4.4e-21 105.5 168 39.9
CAN.G519.1 Capsicum annuum HOM05D003794 ORTHO05D004464 7.5e-21 104.8 164 37.8
Sed0022492 Sechium edule HOM05D003794 ORTHO05D004464 7.5e-21 104.8 158 36.1
TPR.G9537 Trifolium pratense HOM05D003794 ORTHO05D004464 7.5e-21 104.8 153 37.9
Solyc02g069053.1 Solanum lycopersicum HOM05D003794 ORTHO05D004464 9.8e-21 104.4 183 35.5
MBI18_g20612_MAGBIO Magnolia biondii HOM05D003794 ORTHO05D004464 1.3e-20 104.0 179 34.6
SalBow7G3321 Salvia bowleyana HOM05D003794 ORTHO05D004464 3.7e-20 102.4 138 40.6
VMungo1309G0946 Vigna mungo HOM05D003794 ORTHO05D004464 3.7e-20 102.4 180 34.4
Phvul.009G205600 Phaseolus vulgaris HOM05D003794 ORTHO05D004464 6.3e-20 101.7 175 36.6
Lalb_Chr11g0072291 Lupinus albus HOM05D003794 ORTHO05D004464 1.8e-19 100.1 160 38.8
Solyc02g069060.4 Solanum lycopersicum HOM05D003794 ORTHO05D004464 3.1e-19 99.4 163 38.0
Sabra12G0088800 Salix brachista HOM05D003794 ORTHO05D004464 2.7e-18 96.3 133 42.1
Nitab4.5_0003773g0100 Nicotiana tabacum HOM05D003794 ORTHO05D004464 7.8e-18 94.7 111 39.6
Potri.015G120000 Populus trichocarpa HOM05D003794 ORTHO05D004464 5.0e-17 92.0 167 38.3
Sabra06G0010100 Salix brachista HOM05D003794 ORTHO05D004464 8.6e-17 91.3 151 38.4
MD10G1234200 Malus domestica HOM05D003794 ORTHO05D004464 1.1e-16 90.9 129 38.0
TAR627G0658 Trochodendron aralioides HOM05D003794 ORTHO05D004464 1.1e-16 90.9 179 34.6
Potri.015G118800 Populus trichocarpa HOM05D003794 ORTHO05D004464 1.9e-16 90.1 159 36.5
Dinv41335 Davidia involucrata HOM05D003794 ORTHO05D004464 3.6e-15 85.9 134 38.1
Hma1.2p1_0502F.1_g167680 Hydrangea macrophylla HOM05D003794 ORTHO05D004464 3.6e-15 85.9 131 39.7
Hma1.2p1_2069F.1_g313120 Hydrangea macrophylla HOM05D003794 ORTHO05D004464 4.7e-15 85.5 131 39.7
Sabra12G0088700 Salix brachista HOM05D003794 ORTHO05D004464 5.2e-14 82.0 112 40.2
Sabra12G0091800 Salix brachista HOM05D003794 ORTHO05D004464 5.2e-14 82.0 112 40.2
Psat1g023680 Pisum sativum HOM05D003794 ORTHO05D004464 1.2e-13 80.9 132 35.6
ATR0763G032 Amborella trichopoda HOM05D003794 ORTHO05D004464 4.4e-13 79.0 161 30.4
Potri.015G119100 Populus trichocarpa HOM05D003794 ORTHO05D004464 4.4e-13 79.0 123 38.2
HPP92_005937 Vanilla planifolia HOM05D003794 ORTHO05D004464 5.8e-13 78.6 169 30.2
Potri.015G118850 Populus trichocarpa HOM05D003794 ORTHO05D004464 9.8e-13 77.8 115 40.0
ATR0763G201 Amborella trichopoda HOM05D003794 ORTHO05D000146 1.2e-10 70.9 159 28.9
MBI15_g34447_MAGBIO Magnolia biondii HOM05D003794 ORTHO05D000638 2.7e-10 69.7 134 35.1
CDE05G0124 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 4.6e-10 68.9 162 27.8
SEGI_04128 Sequoiadendron giganteum HOM05D000248 ORTHO05D000146 4.6e-10 68.9 164 29.3
ATR0763G193 Amborella trichopoda HOM05D003794 ORTHO05D004464 6.0e-10 68.6 181 29.3
TAR626G0419 Trochodendron aralioides HOM05D003215 ORTHO05D003735 6.6e-09 65.1 168 28.6
MELO3C001310.2 Cucumis melo HOM05D003794 ORTHO05D004464 8.6e-09 64.7 83 43.4
MELO3C027674.2 Cucumis melo HOM05D003794 ORTHO05D004464 9.5e-08 61.2 55 47.3
Dinv13778 Davidia involucrata HOM05D003794 ORTHO05D004464 8.0e-07 58.2 145 30.3
MELO3C027491.2 Cucumis melo HOM05D003794 ORTHO05D004464 1.1e-06 57.8 64 43.8


User provided reference genes

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