Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 4.5e-121 438.0 223 100.0
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.5e-100 369.8 226 82.7
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 5.7e-100 367.9 226 81.4
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 9.7e-100 367.1 225 80.4
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 4.1e-98 361.7 223 79.4
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 7.0e-98 360.9 226 79.2
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 2.6e-97 359.0 222 80.2
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 2.7e-94 349.0 228 78.1
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 4.7e-94 348.2 215 81.4
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 3.0e-93 345.5 211 82.0
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 8.8e-93 344.0 211 82.0
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 8.8e-93 344.0 211 82.0
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 2.6e-92 342.4 211 81.5
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 2.6e-92 342.4 211 81.5
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 2.7e-81 305.8 223 69.1
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.5e-79 300.1 211 70.6
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 2.5e-79 299.3 207 71.5
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.2e-79 298.9 207 72.0
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 6.1e-78 294.7 203 72.4
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.0e-77 293.9 223 66.4
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 5.2e-77 291.6 223 65.9
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 5.2e-77 291.6 234 64.1
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 3.4e-76 288.9 212 66.5
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.4e-76 288.5 223 65.5
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.7e-75 286.6 228 62.7
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 2.2e-75 286.2 219 65.8
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 2.2e-75 286.2 222 64.4
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 2.8e-75 285.8 223 65.5
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 2.8e-75 285.8 212 68.4
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.8e-75 285.8 218 67.0
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 4.9e-75 285.0 217 66.4
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 8.3e-75 284.3 212 68.4
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.1e-74 283.9 218 67.0
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.4e-74 283.5 216 67.1
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 2.4e-74 282.7 210 67.1
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 4.1e-74 282.0 212 65.6
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.1e-74 282.0 216 65.3
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 7.0e-74 281.2 209 66.5
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.2e-73 280.4 218 65.6
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.2e-73 280.4 227 64.3
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.6e-73 280.0 222 63.5
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.6e-73 280.0 233 61.8
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 2.0e-73 279.6 209 67.0
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 2.7e-73 279.3 209 66.0
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 3.5e-73 278.9 210 68.1
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 4.5e-73 278.5 217 65.0
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 4.5e-73 278.5 212 66.5
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.0e-72 277.3 222 63.1
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.0e-72 277.3 208 67.8
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.0e-72 277.3 234 62.0
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 2.9e-72 275.8 224 62.9
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.8e-72 275.4 211 66.4
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 3.8e-72 275.4 209 65.6
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 5.0e-72 275.0 221 62.9
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 6.6e-72 274.6 212 64.2
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 8.6e-72 274.2 213 65.3
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.5e-71 273.5 231 62.3
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.5e-71 273.5 283 53.0
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 2.5e-71 272.7 209 63.6
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 4.3e-71 271.9 209 64.6
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 7.3e-71 271.2 219 61.2
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 7.3e-71 271.2 225 61.3
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 9.5e-71 270.8 211 64.5
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.2e-70 270.4 212 63.7
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 2.1e-70 269.6 216 63.9
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 2.1e-70 269.6 227 62.6
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 2.8e-70 269.2 217 62.7
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 3.6e-70 268.9 212 63.2
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 4.7e-70 268.5 225 60.4
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 6.1e-70 268.1 209 64.6
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 3.0e-69 265.8 210 63.8
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 3.0e-69 265.8 223 60.1
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 4.0e-69 265.4 210 65.2
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 5.2e-69 265.0 211 63.0
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 8.9e-69 264.2 211 63.0
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.2e-68 263.8 210 64.8
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 3.4e-68 262.3 225 61.3
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 5.7e-68 261.5 214 63.6
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 5.7e-68 261.5 212 61.3
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.1e-66 257.3 212 59.4
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 9.2e-66 254.2 216 60.6
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.7e-65 252.7 224 57.1
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 4.6e-65 251.9 227 57.7
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.0e-64 250.8 228 57.0
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.7e-64 250.0 212 58.5
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 3.0e-64 249.2 226 55.3
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 3.9e-64 248.8 221 61.5
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 8.6e-64 247.7 217 58.5
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.5e-63 246.9 224 55.8
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.9e-63 246.5 224 57.6
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 4.3e-63 245.4 278 50.7
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 4.7e-62 241.9 227 55.9
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 6.2e-62 241.5 227 56.4
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 1.0e-61 240.7 213 58.7
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.4e-61 240.4 211 56.9
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 1.4e-61 240.4 229 55.5
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 3.4e-60 235.7 189 60.3
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 7.5e-60 234.6 214 57.0
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.4e-58 230.3 207 57.5
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 5.4e-58 228.4 209 52.6
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.3e-56 223.8 140 74.3
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 7.3e-55 218.0 154 69.5
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.6e-54 216.9 140 74.3
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 2.3e-53 213.0 145 70.3
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.1e-50 204.1 211 53.1
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.2e-50 202.6 139 69.8
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 7.8e-49 198.0 213 48.4
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 3.0e-48 196.1 143 69.2
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 3.2e-42 176.0 119 69.7
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.3e-39 166.0 211 45.0
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.6e-38 163.7 114 68.4
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.3e-27 127.5 191 38.2
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.6e-17 94.0 225 32.0
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 6.9e-13 78.6 122 40.2
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.9e-10 70.5 51 64.7
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 1.1e-07 61.2 163 30.1


User provided reference genes

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