Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 7.2e-69 263.8 138 100.0
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.1e-50 203.4 134 81.3
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 9.7e-50 200.3 134 80.6
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 4.8e-49 198.0 135 80.0
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 1.1e-48 196.8 133 78.9
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 4.1e-48 194.9 137 78.1
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 3.8e-46 188.3 130 78.5
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 1.5e-45 186.4 138 71.0
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 3.2e-45 185.3 133 75.9
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 4.2e-45 184.9 133 75.2
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 4.2e-45 184.9 133 75.2
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 4.2e-45 184.9 133 75.2
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 3.6e-44 181.8 134 74.6
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 1.0e-43 180.3 133 72.9
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 1.6e-36 156.4 139 63.3
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 3.0e-35 152.1 137 60.6
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 1.2e-34 150.2 142 57.7
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 1.5e-34 149.8 139 60.4
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 2.6e-34 149.1 138 60.1
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 3.4e-34 148.7 138 59.4
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 7.5e-34 147.5 138 59.4
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 9.8e-34 147.1 131 61.8
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 2.2e-33 146.0 145 57.2
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 6.3e-33 144.4 136 59.6
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 1.8e-32 142.9 143 58.0
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 2.0e-31 139.4 134 58.2
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.7e-31 139.0 137 54.7
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.7e-31 139.0 140 55.0
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 3.5e-31 138.7 138 58.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 3.5e-31 138.7 151 53.6
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 3.5e-31 138.7 138 57.2
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.5e-31 138.3 130 55.4
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.7e-30 136.3 133 55.6
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 2.3e-30 136.0 130 54.6
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 3.8e-30 135.2 139 55.4
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 6.6e-30 134.4 133 54.9
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 8.6e-30 134.0 139 59.0
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 1.1e-29 133.7 139 55.4
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.1e-29 133.7 127 60.6
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.5e-29 133.3 142 51.4
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 1.9e-29 132.9 144 52.1
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 1.9e-29 132.9 135 54.1
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 1.9e-29 132.9 135 54.1
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 2.5e-29 132.5 126 57.1
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 4.2e-29 131.7 129 54.3
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 7.2e-29 131.0 130 53.8
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 9.5e-29 130.6 124 58.9
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 1.6e-28 129.8 134 52.2
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 2.1e-28 129.4 134 56.7
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 2.1e-28 129.4 142 54.2
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 2.1e-28 129.4 141 52.5
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 2.1e-28 129.4 128 55.5
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 2.1e-28 129.4 134 52.2
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 2.1e-28 129.4 129 53.5
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 2.1e-28 129.4 134 53.0
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 2.8e-28 129.0 147 53.1
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 3.6e-28 128.6 129 51.9
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 6.1e-28 127.9 134 53.0
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 8.0e-28 127.5 133 53.4
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 8.0e-28 127.5 129 51.9
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.0e-27 125.6 129 51.2
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 4.0e-27 125.2 129 54.3
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 5.2e-27 124.8 129 51.2
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 8.9e-27 124.0 136 56.6
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.0e-26 122.9 148 47.3
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 2.0e-26 122.9 129 50.4
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 4.4e-26 121.7 140 51.4
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 7.5e-26 120.9 124 52.4
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 7.5e-26 120.9 129 50.4
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 6.3e-25 117.9 138 50.7
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 1.1e-24 117.1 122 53.3
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 1.4e-24 116.7 131 49.6
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 4.1e-24 115.2 121 52.1
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 1.2e-23 113.6 141 47.5
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 3.5e-23 112.1 123 51.2
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 7.8e-23 110.9 130 48.5
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.0e-22 110.5 130 48.5
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 2.9e-22 109.0 124 49.2
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.9e-22 108.6 123 51.2
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.9e-22 108.6 122 51.6
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 8.6e-22 107.5 121 51.2
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.5e-21 106.7 132 46.2
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 3.3e-21 105.5 135 45.9
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 3.6e-20 102.1 142 44.4
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 1.0e-19 100.5 122 50.0
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 1.0e-19 100.5 132 47.0
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 1.4e-19 100.1 79 67.1
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 3.1e-19 99.0 218 33.5
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 3.1e-19 99.0 79 60.8
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 8.9e-19 97.4 138 47.1
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 8.9e-19 97.4 139 42.4
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 1.5e-18 96.7 76 59.2
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 1.5e-18 96.7 129 41.9
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 2.0e-18 96.3 126 42.1
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.3e-17 93.6 140 45.7
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.7e-17 93.2 125 48.0
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 1.7e-17 93.2 76 60.5
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 8.3e-17 90.9 127 44.9
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 4.1e-16 88.6 110 46.4
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 4.1e-16 88.6 119 46.2
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 7.0e-16 87.8 104 52.9
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 4.6e-15 85.1 130 41.5
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 1.0e-14 84.0 153 36.6
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 1.7e-14 83.2 86 53.5
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.7e-14 83.2 109 46.8
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 3.9e-14 82.0 67 56.7
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 8.6e-14 80.9 117 42.7
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 4.7e-12 75.1 129 38.0
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.0e-10 69.7 121 41.3
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 2.2e-09 66.2 124 35.5


User provided reference genes

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