Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.9e-70 268.5 136 100.0
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 9.9e-47 190.3 137 74.5
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.3e-46 189.9 137 73.0
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 3.2e-45 185.3 136 73.5
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.7e-44 182.2 136 72.8
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 3.5e-44 181.8 136 72.8
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 4.6e-44 181.4 131 74.0
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 7.4e-42 174.1 137 69.3
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 3.7e-41 171.8 135 67.4
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 2.4e-40 169.1 133 66.9
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 3.1e-40 168.7 135 69.6
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 4.0e-40 168.3 135 71.1
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 6.9e-40 167.5 133 65.4
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 4.5e-39 164.9 133 63.2
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 4.5e-39 164.9 131 64.9
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 5.8e-39 164.5 140 65.7
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 9.9e-39 163.7 131 65.6
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 9.9e-39 163.7 127 67.7
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 9.9e-39 163.7 124 65.3
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 1.7e-38 162.9 133 65.4
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 2.2e-38 162.5 98 80.6
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.9e-38 162.2 133 62.4
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 4.9e-38 161.4 139 61.9
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 6.4e-38 161.0 135 63.0
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 8.4e-38 160.6 138 60.9
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 3.2e-37 158.7 108 72.2
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 4.2e-37 158.3 142 57.7
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.2e-36 156.8 135 61.5
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 1.2e-36 156.8 136 63.2
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.6e-36 156.4 137 62.8
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.6e-36 156.4 137 62.8
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.1e-36 156.0 135 61.5
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 2.7e-36 155.6 139 61.9
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 2.7e-36 155.6 132 63.6
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 3.5e-36 155.2 132 63.6
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 3.5e-36 155.2 140 60.7
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 4.6e-36 154.8 132 61.4
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 4.6e-36 154.8 98 76.5
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 1.0e-35 153.7 138 60.9
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 1.0e-35 153.7 138 60.9
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.0e-35 153.7 139 60.4
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.0e-35 153.7 94 76.6
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.0e-35 153.7 132 63.6
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 1.3e-35 153.3 143 58.7
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 1.8e-35 152.9 141 60.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.8e-35 152.9 94 76.6
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 3.0e-35 152.1 98 74.5
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 3.9e-35 151.8 144 59.7
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 5.1e-35 151.4 136 61.8
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 5.1e-35 151.4 100 71.0
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 5.1e-35 151.4 142 59.9
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 6.7e-35 151.0 142 58.5
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 6.7e-35 151.0 124 62.9
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 8.7e-35 150.6 144 59.0
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.1e-34 150.2 114 71.1
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 1.1e-34 150.2 111 66.7
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.5e-34 149.8 122 63.9
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 1.5e-34 149.8 135 60.7
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.3e-34 148.7 129 62.0
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 5.6e-34 147.9 139 61.2
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 5.6e-34 147.9 132 61.4
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 5.6e-34 147.9 133 60.2
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 7.4e-34 147.5 135 58.5
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 1.6e-33 146.4 144 56.9
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 3.7e-33 145.2 98 69.4
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 1.4e-32 143.3 100 72.0
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 2.4e-32 142.5 140 55.7
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 2.4e-32 142.5 100 67.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 3.1e-32 142.1 91 75.8
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 4.0e-32 141.7 137 54.0
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 4.0e-32 141.7 114 62.3
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 6.9e-32 141.0 135 54.8
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 9.0e-32 140.6 93 73.1
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 4.5e-31 138.3 134 58.2
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 2.2e-30 136.0 140 55.7
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.1e-29 133.7 113 61.9
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 9.3e-29 130.6 98 63.3
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 2.1e-28 129.4 135 54.1
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 3.5e-28 128.6 110 61.8
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 4.6e-28 128.3 91 63.7
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 7.9e-28 127.5 124 54.0
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 7.9e-28 127.5 117 56.4
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.0e-27 127.1 118 58.5
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.8e-27 126.3 114 59.6
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 3.0e-27 125.6 108 62.0
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 6.7e-27 124.4 104 61.5
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 6.7e-27 124.4 70 81.4
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 1.1e-26 123.6 94 62.8
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.1e-26 123.6 76 76.3
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 1.9e-26 122.9 115 57.4
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.3e-26 122.1 106 62.3
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.3e-26 122.1 120 56.7
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 4.3e-26 121.7 93 60.2
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.1e-24 115.5 148 48.0
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 4.1e-24 115.2 118 55.1
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.6e-23 112.5 73 71.2
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 6.5e-22 107.8 83 61.4
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 6.5e-22 107.8 88 55.7
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 6.5e-22 107.8 94 56.4
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 3.2e-21 105.5 63 77.8
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.3e-19 99.4 78 61.5
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 3.0e-19 99.0 54 88.9
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 4.1e-16 88.6 93 54.8
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 4.7e-12 75.1 99 36.4
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 2.3e-11 72.8 97 42.3
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 7.4e-10 67.8 42 71.4
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 2.6e-07 59.3 77 44.2


User provided reference genes

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