Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.8e-94 349.4 188 100.0
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 8.2e-76 287.3 181 85.1
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 3.8e-73 278.5 178 85.4
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 1.5e-72 276.6 179 84.4
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 3.2e-72 275.4 187 82.4
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 4.2e-72 275.0 188 80.9
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 5.5e-72 274.6 179 83.8
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 5.5e-72 274.6 179 84.4
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 9.4e-72 273.9 179 83.2
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 8.0e-71 270.8 188 80.9
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.8e-70 269.6 186 82.3
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.3e-70 269.2 188 81.4
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 3.0e-70 268.9 193 75.6
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 5.2e-70 268.1 181 80.7
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 4.1e-67 258.5 185 76.2
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 1.0e-65 253.8 192 74.5
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 3.8e-65 251.9 188 74.5
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.1e-64 250.4 191 72.3
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 7.2e-64 247.7 193 70.5
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 4.0e-62 241.9 177 73.4
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.8e-62 240.7 192 71.4
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 1.5e-61 240.0 186 72.6
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 2.0e-61 239.6 177 72.9
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 2.0e-61 239.6 193 68.4
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 3.4e-61 238.8 190 72.1
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 4.4e-61 238.4 192 70.8
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 7.5e-61 237.7 195 70.3
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 9.8e-61 237.3 189 70.4
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 1.3e-60 236.9 184 69.6
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 2.2e-60 236.1 184 69.6
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 2.2e-60 236.1 189 68.8
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 2.8e-60 235.7 182 68.1
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 2.8e-60 235.7 176 75.0
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 2.8e-60 235.7 177 70.1
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 1.1e-59 233.8 178 69.7
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 1.1e-59 233.8 178 69.7
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 1.1e-59 233.8 175 70.9
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 9.2e-59 230.7 179 69.8
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 1.2e-58 230.3 183 69.4
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.6e-58 229.9 192 68.8
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 2.0e-58 229.6 191 67.5
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.7e-58 229.2 190 70.0
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 3.5e-58 228.8 190 70.0
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 1.3e-57 226.9 193 66.8
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.9e-57 225.7 188 68.1
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 5.0e-57 224.9 185 68.1
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 6.6e-57 224.6 184 69.0
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.5e-56 223.4 180 69.4
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 7.3e-56 221.1 192 64.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 9.5e-56 220.7 185 67.0
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-55 220.3 187 67.4
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.2e-55 220.3 179 69.8
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 2.1e-55 219.5 201 64.2
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 2.8e-55 219.2 187 63.6
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 6.1e-55 218.0 187 65.8
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 1.0e-54 217.2 173 68.2
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.4e-54 216.9 181 67.4
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 1.4e-54 216.9 183 65.0
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 1.8e-54 216.5 161 72.0
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 2.3e-54 216.1 190 64.2
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 3.0e-54 215.7 185 64.3
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 3.0e-54 215.7 195 64.6
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 4.0e-54 215.3 190 63.7
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 6.8e-54 214.5 191 67.5
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 6.8e-54 214.5 187 66.3
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 1.2e-53 213.8 186 61.3
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-53 213.8 168 69.6
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.0e-53 213.0 183 67.2
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 2.6e-53 212.6 188 64.9
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 1.3e-52 210.3 192 66.7
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.9e-52 209.1 198 61.1
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 3.7e-52 208.8 173 68.8
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 4.9e-52 208.4 198 61.6
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 4.9e-52 208.4 173 65.9
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 6.4e-52 208.0 190 63.2
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 8.3e-52 207.6 209 58.9
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 8.3e-52 207.6 183 66.1
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 1.1e-51 207.2 183 68.9
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 1.1e-51 207.2 198 61.6
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.8e-51 206.5 173 68.2
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 4.1e-51 205.3 186 64.5
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.2e-50 203.8 198 60.6
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 1.6e-50 203.4 201 59.7
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 4.6e-50 201.8 191 64.4
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 2.3e-49 199.5 186 60.2
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 2.3e-49 199.5 181 60.8
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 6.6e-49 198.0 159 70.4
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 6.6e-49 198.0 174 64.4
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 8.6e-49 197.6 174 65.5
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 8.6e-49 197.6 169 63.9
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.9e-48 196.4 168 63.7
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 4.3e-48 195.3 203 58.6
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 5.6e-48 194.9 234 53.4
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 5.6e-48 194.9 112 83.9
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.2e-47 193.7 130 76.2
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.6e-47 193.4 185 62.2
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 6.2e-47 191.4 178 64.0
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.3e-46 189.5 187 62.0
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.0e-46 188.7 111 82.9
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 4.4e-45 185.3 118 78.0
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.3e-44 183.7 113 78.8
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 2.2e-44 183.0 113 79.6
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 3.7e-44 182.2 113 77.0
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 1.9e-43 179.9 113 77.0
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.5e-40 169.5 171 60.8
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 2.5e-40 169.5 150 64.7
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 9.5e-40 167.5 150 64.0
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.2e-39 167.2 139 62.6
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.3e-36 157.1 92 81.5
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 6.4e-36 154.8 88 81.8
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.1e-35 154.1 92 80.4
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.6e-34 150.2 180 48.3
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 6.0e-34 148.3 101 79.2
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 5.1e-33 145.2 127 64.6
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 1.5e-32 143.7 110 62.7
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 5.6e-32 141.7 92 75.0
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 1.5e-29 133.7 97 64.9
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.0e-29 133.3 107 59.8
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 4.4e-29 132.1 101 59.4
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 7.6e-29 131.3 97 62.9
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.4e-27 127.1 90 66.7
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 3.2e-27 125.9 138 57.2
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.1e-26 123.2 70 81.4
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 4.6e-26 122.1 70 78.6
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 3.3e-24 115.9 102 59.8
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.2e-21 107.5 170 41.2
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 2.6e-21 106.3 92 58.7
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.3e-09 66.6 85 36.5


User provided reference genes

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