Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 2.2e-48 195.3 97 100.0
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.1e-43 178.7 97 87.6
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.8e-43 178.3 98 88.8
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 5.2e-42 174.1 97 84.5
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.0e-41 172.2 97 81.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.4e-41 171.4 97 85.6
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 9.9e-41 169.9 97 81.4
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-39 166.0 97 79.4
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-39 166.0 97 79.4
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-39 166.0 97 79.4
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.4e-39 166.0 97 79.4
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 3.2e-39 164.9 97 78.4
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 4.2e-39 164.5 97 78.4
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.6e-38 162.5 97 77.3
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 3.5e-38 161.4 97 78.4
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 7.8e-38 160.2 90 81.1
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 1.7e-37 159.1 96 77.1
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.9e-37 157.9 98 76.5
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 3.9e-37 157.9 98 78.6
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 5.1e-37 157.5 98 77.6
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 8.7e-37 156.8 98 77.6
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 8.7e-37 156.8 98 77.6
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 77.6
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.1e-36 156.4 97 71.1
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 95 75.8
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.9e-36 155.6 98 77.6
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.5e-36 155.2 98 75.5
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 3.3e-36 154.8 93 73.1
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 3.3e-36 154.8 96 75.0
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 75.3
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 3.3e-36 154.8 98 74.5
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 4.3e-36 154.5 95 75.8
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 7.3e-36 153.7 101 70.3
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.3e-36 153.7 101 70.3
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.3e-36 153.7 101 70.3
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 7.3e-36 153.7 97 71.1
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 7.3e-36 153.7 101 71.3
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 9.6e-36 153.3 98 74.5
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.6e-35 152.5 95 74.7
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 2.8e-35 151.8 96 69.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 4.8e-35 151.0 95 69.5
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.2e-35 150.6 101 69.3
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 8.1e-35 150.2 89 75.3
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 90 75.6
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 90 75.6
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.1e-34 149.8 90 75.6
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 98 71.4
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.4e-34 149.4 96 71.9
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.4e-34 148.7 96 71.9
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.4e-34 148.7 101 70.3
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 91 72.5
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.9e-34 147.1 98 70.4
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 6.9e-34 147.1 99 70.7
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.2e-33 146.4 96 71.9
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.0e-33 145.6 97 72.2
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.0e-33 145.6 93 68.8
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 2.6e-33 145.2 98 69.4
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.6e-33 145.2 92 67.4
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 2.6e-33 145.2 83 80.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 3.4e-33 144.8 97 64.9
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 3.4e-33 144.8 101 68.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.5e-33 144.4 95 70.5
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 5.8e-33 144.1 96 67.7
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 5.8e-33 144.1 98 68.4
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 5.8e-33 144.1 93 68.8
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 9.9e-33 143.3 92 69.6
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 9.9e-33 143.3 96 71.9
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 9.9e-33 143.3 98 67.3
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 9.9e-33 143.3 98 67.3
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.3e-32 142.9 96 70.8
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.7e-32 142.5 94 67.0
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.7e-32 142.5 95 67.4
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.2e-32 142.1 103 67.0
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.9e-32 141.7 92 71.7
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 4.9e-32 141.0 92 67.4
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 8.4e-32 140.2 97 68.0
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 8.4e-32 140.2 93 65.6
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 8.4e-32 140.2 98 67.3
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.4e-31 138.7 98 64.3
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.2e-31 138.3 95 67.4
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 4.2e-31 137.9 95 66.3
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 4.2e-31 137.9 91 71.4
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 4.2e-31 137.9 96 65.6
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 5.4e-31 137.5 93 67.7
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 7.1e-31 137.1 98 66.3
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 4.6e-30 134.4 95 65.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.0e-29 133.3 95 64.2
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.8e-29 132.5 97 67.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.3e-29 132.1 93 63.4
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 2.3e-29 132.1 80 73.8
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 3.0e-29 131.7 97 64.9
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 6.7e-29 130.6 98 64.3
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 8.7e-29 130.2 80 75.0
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 8.7e-29 130.2 99 63.6
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 8.7e-29 130.2 125 55.2
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.1e-28 129.8 85 69.4
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.1e-28 129.8 81 76.5
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.9e-28 129.0 91 65.9
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 2.5e-28 128.6 84 67.9
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 3.3e-28 128.3 87 72.4
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 3.3e-28 128.3 104 60.6
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.8e-26 122.5 89 67.4
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.2e-25 119.8 80 70.0
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 4.5e-25 117.9 78 70.5
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.5e-23 110.9 104 55.8
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 3.0e-21 105.1 62 77.4
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 5.6e-20 100.9 80 60.0
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.4e-18 96.3 71 63.4
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 6.9e-18 94.0 84 52.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.2e-17 93.2 87 52.9
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 4.5e-17 91.3 79 54.4
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.2e-14 83.2 112 42.9
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 1.0e-13 80.1 86 52.3
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 7.4e-12 73.9 44 75.0
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 2.8e-11 72.0 50 66.0
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 2.0e-09 65.9 74 48.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.5e-09 64.7 38 71.1
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 2.2e-08 62.4 53 52.8


User provided reference genes

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