Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 1.3e-73 280.0 183 100.0
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 1.0e-38 164.1 182 57.1
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 9.6e-37 157.5 183 56.3
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 1.8e-35 153.3 159 63.5
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 2.4e-35 152.9 182 52.7
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 2.0e-34 149.8 174 53.4
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 5.4e-32 141.7 69 91.3
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 9.3e-32 141.0 167 53.3
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.6e-31 140.2 69 89.9
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.6e-31 140.2 69 89.9
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 1.6e-31 140.2 165 53.9
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.5e-31 139.0 165 52.1
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 3.5e-31 139.0 165 52.7
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 3.5e-31 139.0 165 52.7
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 3.5e-31 139.0 75 85.3
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 1.8e-30 136.7 68 89.7
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 5.1e-30 135.2 95 72.6
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 8.7e-30 134.4 96 66.7
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 1.9e-29 133.3 88 71.6
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 2.5e-29 132.9 66 86.4
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.5e-29 132.9 67 86.6
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 2.5e-29 132.9 66 87.9
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 2.5e-29 132.9 93 67.7
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 3.3e-29 132.5 91 71.4
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 9.6e-29 131.0 66 86.4
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 9.6e-29 131.0 66 86.4
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.3e-28 130.6 92 69.6
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 1.3e-28 130.6 77 75.3
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 2.1e-28 129.8 72 83.3
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 2.1e-28 129.8 69 84.1
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 2.1e-28 129.8 179 47.5
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 2.1e-28 129.8 83 72.3
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 2.8e-28 129.4 72 80.6
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 2.8e-28 129.4 76 78.9
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 2.8e-28 129.4 67 82.1
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 3.7e-28 129.0 92 68.5
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 4.8e-28 128.6 91 69.2
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 6.2e-28 128.3 67 82.1
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 8.1e-28 127.9 97 68.0
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.8e-27 126.7 67 82.1
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.8e-27 126.7 92 69.6
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.8e-27 126.7 67 83.6
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 2.4e-27 126.3 93 66.7
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 3.1e-27 125.9 72 76.4
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 4.0e-27 125.6 92 65.2
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 5.3e-27 125.2 72 76.4
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.3e-27 125.2 72 76.4
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.3e-27 125.2 72 76.4
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 5.3e-27 125.2 93 64.5
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 5.3e-27 125.2 87 70.1
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 5.3e-27 125.2 82 72.0
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 6.9e-27 124.8 98 63.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 6.9e-27 124.8 69 82.6
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 6.9e-27 124.8 66 81.8
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 6.9e-27 124.8 66 84.8
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 6.9e-27 124.8 92 68.5
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 9.0e-27 124.4 64 84.4
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 9.0e-27 124.4 64 84.4
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 9.0e-27 124.4 65 81.5
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 9.0e-27 124.4 90 67.8
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 1.2e-26 124.0 76 76.3
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.2e-26 124.0 72 75.0
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 1.5e-26 123.6 85 70.6
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.5e-26 123.6 66 84.8
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 2.0e-26 123.2 92 66.3
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 2.0e-26 123.2 67 80.6
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.0e-26 123.2 65 81.5
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.6e-26 122.9 91 65.9
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 2.6e-26 122.9 91 65.9
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 3.4e-26 122.5 61 86.9
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 3.4e-26 122.5 87 66.7
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 3.4e-26 122.5 91 67.0
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 3.4e-26 122.5 95 64.2
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 3.4e-26 122.5 94 63.8
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 4.5e-26 122.1 95 63.2
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 4.5e-26 122.1 81 74.1
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 4.5e-26 122.1 90 65.6
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 4.5e-26 122.1 66 81.8
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 5.8e-26 121.7 94 66.0
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 7.6e-26 121.3 86 67.4
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 7.6e-26 121.3 65 81.5
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 9.9e-26 120.9 75 74.7
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 9.9e-26 120.9 78 69.2
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 9.9e-26 120.9 81 69.1
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 9.9e-26 120.9 83 68.7
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 9.9e-26 120.9 77 71.4
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 9.9e-26 120.9 92 68.5
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 9.9e-26 120.9 90 67.8
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 1.3e-25 120.6 91 67.0
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.3e-25 120.6 83 67.5
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 1.3e-25 120.6 94 63.8
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 1.3e-25 120.6 74 71.6
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 2.2e-25 119.8 84 64.3
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 2.2e-25 119.8 65 78.5
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 2.2e-25 119.8 67 77.6
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 3.8e-25 119.0 78 67.9
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 4.9e-25 118.6 66 77.3
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 8.4e-25 117.9 85 65.9
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 1.4e-24 117.1 76 73.7
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 2.4e-24 116.3 69 75.4
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 3.5e-23 112.5 83 63.9
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 6.0e-23 111.7 81 65.4
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 2.4e-19 99.8 54 79.6
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 6.9e-19 98.2 76 59.2
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.8e-14 83.6 71 50.7
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 6.7e-14 81.6 86 47.7
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 2.1e-07 60.1 49 51.0


User provided reference genes

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