Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 5.5e-119 431.0 226 100.0
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 5.6e-87 324.7 228 75.9
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.8e-86 322.4 226 76.1
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 3.6e-86 322.0 227 77.1
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 7.6e-84 314.3 227 74.9
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.2e-83 312.8 229 74.2
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 4.9e-83 311.6 229 73.8
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 4.9e-83 311.6 227 74.9
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.1e-82 310.5 227 74.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 4.2e-82 308.5 224 75.0
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 5.4e-82 308.1 231 71.9
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 7.1e-82 307.8 227 74.4
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 2.1e-81 306.2 224 74.1
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 2.8e-78 295.8 232 69.8
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.6e-65 253.4 192 67.7
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 4.3e-63 245.4 192 63.5
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 6.2e-62 241.5 193 63.7
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.4e-61 240.4 226 55.8
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.8e-61 240.0 195 64.1
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.1e-61 239.2 196 63.8
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 4.0e-61 238.8 221 57.9
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 2.0e-60 236.5 210 56.2
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 5.8e-60 235.0 211 57.8
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.0e-59 234.2 232 56.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.3e-59 233.8 226 55.3
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 1.3e-59 233.8 211 56.4
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 2.2e-59 233.0 229 56.3
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 2.2e-59 233.0 214 56.5
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 6.5e-59 231.5 188 62.2
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 6.5e-59 231.5 214 56.5
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 6.5e-59 231.5 214 56.1
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 8.4e-59 231.1 230 55.7
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.4e-58 230.3 191 60.7
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 3.2e-58 229.2 193 63.7
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 3.2e-58 229.2 235 53.6
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 4.2e-58 228.8 194 60.8
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 2.1e-57 226.5 195 59.5
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 2.7e-57 226.1 196 60.7
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 2.7e-57 226.1 227 52.4
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 3.5e-57 225.7 233 54.9
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 6.0e-57 224.9 195 61.0
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 7.9e-57 224.6 196 58.7
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.3e-56 223.8 195 60.5
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 2.3e-56 223.0 202 59.9
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 3.0e-56 222.6 198 58.6
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 3.9e-56 222.2 218 55.0
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 5.1e-56 221.9 194 59.3
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 5.1e-56 221.9 216 54.6
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 5.1e-56 221.9 221 55.2
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 6.7e-56 221.5 196 58.2
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 1.1e-55 220.7 194 58.8
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.1e-55 220.7 224 55.8
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 2.5e-55 219.5 191 61.3
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 2.5e-55 219.5 196 56.6
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 4.3e-55 218.8 219 53.4
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 5.7e-55 218.4 196 58.2
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 7.4e-55 218.0 192 60.4
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.3e-54 217.2 193 57.5
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 4.8e-54 215.3 196 59.7
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 4.8e-54 215.3 229 51.5
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.4e-53 213.8 195 57.9
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.8e-53 213.4 195 57.9
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 5.3e-53 211.8 230 54.3
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 6.9e-53 211.5 203 55.7
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 6.9e-53 211.5 195 56.9
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 9.0e-53 211.1 188 59.6
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 2.0e-52 209.9 197 57.9
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.4e-52 209.1 223 51.6
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 5.8e-52 208.4 229 50.2
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 7.6e-52 208.0 163 63.2
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.0e-51 207.6 193 56.0
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.7e-51 206.8 166 65.7
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 8.4e-51 204.5 209 53.1
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.4e-50 203.8 161 64.0
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.1e-49 199.9 195 54.9
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 2.1e-49 199.9 251 49.0
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 3.5e-49 199.1 165 63.0
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 4.6e-49 198.7 187 56.7
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 2.5e-47 193.0 194 55.2
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.2e-46 189.9 166 60.2
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 3.8e-43 179.1 169 56.8
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 1.4e-42 177.2 217 47.5
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 7.2e-42 174.9 182 52.7
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 9.4e-42 174.5 193 49.2
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.2e-41 174.1 182 52.2
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.5e-39 167.2 173 57.2
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 2.0e-39 166.8 225 41.8
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 5.3e-37 158.7 173 48.0
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 6.9e-37 158.3 142 59.9
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 2.5e-34 149.8 191 44.5
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 9.4e-34 147.9 191 46.1
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 3.6e-33 146.0 121 57.0
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 4.7e-33 145.6 203 43.3
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.8e-32 143.7 191 45.5
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 5.1e-32 142.1 171 42.7
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 7.4e-31 138.3 140 52.9
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.0e-27 125.6 134 52.2
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 5.2e-24 115.5 103 55.3
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.7e-22 109.4 89 62.9
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 1.4e-21 107.5 88 60.2
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 2.7e-20 103.2 94 56.4
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 3.8e-19 99.4 171 36.8
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.1e-18 97.8 113 47.8
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 5.5e-18 95.5 97 52.6
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.8e-11 72.8 89 49.4
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 9.8e-07 58.2 45 60.0


User provided reference genes

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