Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.3e-111 405.6 212 100.0
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 9.6e-65 250.8 225 71.6
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 3.4e-62 242.3 223 69.5
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.3e-61 240.4 217 69.1
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.7e-61 240.0 221 68.8
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.2e-59 233.8 221 67.9
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.6e-54 216.1 217 60.8
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.6e-51 206.8 216 59.3
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 2.4e-47 193.0 219 59.4
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 2.4e-47 193.0 219 59.4
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 4.1e-47 192.2 221 60.2
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 6.9e-47 191.4 221 60.2
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 9.1e-47 191.0 222 59.5
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 9.1e-47 191.0 220 55.5
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 3.4e-46 189.1 215 57.2
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.7e-40 170.2 222 51.4
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 8.2e-40 167.9 217 52.1
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-39 167.2 228 52.6
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 3.1e-39 166.0 220 50.9
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.6e-38 162.9 225 51.6
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.2e-37 159.8 209 49.8
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.5e-36 157.1 209 49.3
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 4.2e-36 155.6 214 50.0
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 3.6e-35 152.5 224 47.8
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.7e-35 152.1 222 48.2
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.4e-34 150.6 225 48.0
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 8.8e-34 147.9 221 48.0
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 1.1e-33 147.5 223 48.4
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.0e-33 146.7 225 47.6
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 4.4e-33 145.6 206 48.1
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 9.7e-33 144.4 225 48.0
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.2e-32 143.3 218 45.9
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 2.8e-32 142.9 222 46.8
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.8e-32 142.9 222 48.2
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 4.8e-32 142.1 205 46.3
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.4e-31 140.6 215 47.9
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 9.1e-31 137.9 225 44.9
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 9.1e-31 137.9 210 49.0
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.2e-30 137.5 217 47.0
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.2e-30 137.5 224 45.5
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.6e-30 137.1 205 46.3
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.6e-30 137.1 227 44.5
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.7e-30 136.3 232 45.3
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 3.5e-30 136.0 224 42.9
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.3e-29 134.0 199 48.2
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.7e-29 133.7 185 55.7
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.7e-29 133.7 185 55.7
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.7e-29 133.7 185 55.7
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.7e-29 133.7 223 46.2
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.8e-29 132.5 199 45.7
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.8e-29 132.5 232 44.8
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 3.8e-29 132.5 232 44.8
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 6.5e-29 131.7 221 45.7
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.5e-29 131.7 220 46.4
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 6.5e-29 131.7 189 46.0
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.5e-29 131.3 220 45.9
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.1e-28 131.0 222 44.6
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.5e-28 130.6 198 48.0
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.9e-28 130.2 206 46.6
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.5e-28 129.8 191 47.6
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 3.2e-28 129.4 219 45.7
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.5e-28 128.6 209 47.8
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 7.2e-28 128.3 223 43.0
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.2e-27 127.5 196 46.9
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.2e-27 127.5 199 45.2
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.7e-27 126.3 220 41.8
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 6.1e-27 125.2 226 41.2
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 6.1e-27 125.2 195 47.7
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.4e-26 124.0 218 43.6
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.0e-26 122.5 209 44.0
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 5.2e-26 122.1 220 42.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.2e-25 120.9 216 44.0
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 2.0e-25 120.2 216 42.6
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.6e-25 119.8 209 41.6
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 3.4e-25 119.4 205 43.4
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 5.7e-25 118.6 224 42.9
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 5.7e-25 118.6 221 43.9
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 5.7e-25 118.6 206 44.7
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 9.8e-25 117.9 226 43.8
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 9.8e-25 117.9 220 44.5
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 9.8e-25 117.9 205 45.4
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.7e-24 117.1 227 40.5
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.2e-24 116.7 153 49.0
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 2.2e-24 116.7 222 48.2
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 3.7e-24 115.9 220 43.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 8.3e-24 114.8 211 44.1
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 4.1e-23 112.5 221 38.9
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 4.1e-23 112.5 231 40.3
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 5.4e-23 112.1 215 40.5
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 7.0e-23 111.7 203 42.4
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.7e-22 109.8 198 41.4
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 3.5e-22 109.4 223 40.4
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.3e-21 107.5 215 39.1
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 2.2e-21 106.7 194 44.3
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 5.0e-21 105.5 201 42.3
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.9e-20 103.6 226 38.9
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.5e-20 103.2 187 40.6
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.5e-20 103.2 187 40.6
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 3.2e-20 102.8 133 49.6
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 4.2e-20 102.4 188 43.1
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 9.4e-20 101.3 216 41.2
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.2e-19 100.9 204 42.6
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.1e-19 100.1 222 41.0
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 2.1e-19 100.1 229 37.6
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 2.7e-19 99.8 211 37.9
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 6.1e-19 98.6 267 36.0
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.4e-18 97.4 224 40.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.4e-18 97.4 214 38.8
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.2e-18 95.5 208 38.5
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.5e-17 94.0 214 37.9
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.6e-17 93.2 220 35.5
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.6e-17 93.2 202 41.1
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.4e-17 92.8 169 40.8
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 6.3e-16 88.6 135 50.4
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 6.3e-16 88.6 135 50.4
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-15 87.0 132 49.2
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-15 87.0 132 49.2
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 3.1e-15 86.3 220 35.0
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 5.4e-15 85.5 217 35.0
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 3.5e-14 82.8 204 35.8
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 5.0e-13 79.0 208 36.1
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 6.6e-13 78.6 181 39.8
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.9e-12 77.0 179 36.3
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 5.2e-10 68.9 82 52.4
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.2e-09 67.8 156 37.2
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 1.2e-09 67.8 181 32.0
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 5.7e-09 65.5 75 49.3
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 5.7e-09 65.5 75 49.3
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 6.4e-08 62.0 181 32.6
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 7.0e-07 58.5 96 42.7
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 7.8e-06 55.1 108 38.0


User provided reference genes

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