Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G11510 Aethionema arabicum HOM05D008703 ORTHO05D006961 2.2e-38 161.8 80 100.0
Aa31LG9G11460 Aethionema arabicum HOM05D008703 ORTHO05D006961 4.6e-36 154.1 80 96.2
Aa31LG9G11540 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.3e-33 146.0 80 91.2
Sp6g06920 Schrenkiella parvula HOM05D008703 ORTHO05D006961 2.0e-10 68.9 78 48.7
AL6G44550 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 3.3e-10 68.2 80 55.0
Sp6g06940 Schrenkiella parvula HOM05D008703 ORTHO05D006961 2.8e-09 65.1 77 49.4
BcaB04g17983 Brassica carinata HOM05D008703 ORTHO05D006961 2.4e-08 62.0 82 46.3
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 4.1e-08 61.2 86 46.5
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 7.0e-08 60.5 88 42.0
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.6e-07 59.3 84 45.2
CARHR256120 Cardamine hirsuta HOM05D008703 ORTHO05D006961 1.6e-07 59.3 80 48.8
ClCG01G001400 Citrullus lanatus HOM05D018156 ORTHO05D006961 2.7e-07 58.5 84 39.3
Thhalv10029203m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 2.7e-07 58.5 80 47.5
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 2.7e-07 58.5 90 37.8
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 2.7e-07 58.5 82 45.1
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 5.9e-07 57.4 80 40.0
AL1G47200 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 7.7e-07 57.0 82 39.0
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 1.0e-06 56.6 88 39.8
Aa31LG6G7510 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.3e-06 56.2 83 44.6
A08p09220 Brassica napus HOM05D008703 ORTHO05D006961 1.7e-06 55.8 80 37.5
A09p33480 Brassica napus HOM05D008703 ORTHO05D006961 1.7e-06 55.8 81 43.2
BraA08t32922Z Brassica rapa HOM05D008703 ORTHO05D006961 1.7e-06 55.8 80 37.5
BraA09t38890Z Brassica rapa HOM05D008703 ORTHO05D006961 1.7e-06 55.8 81 43.2
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 1.7e-06 55.8 88 39.8
Sed0012511 Sechium edule HOM05D018156 ORTHO05D006961 1.7e-06 55.8 87 40.2
BcaC07g37617 Brassica carinata HOM05D008703 ORTHO05D006961 2.2e-06 55.5 80 37.5
BolC8t47976H Brassica oleracea HOM05D008703 ORTHO05D006961 2.2e-06 55.5 80 37.5
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 2.2e-06 55.5 84 40.5
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 2.2e-06 55.5 88 39.8
BcaC05g27315 Brassica carinata HOM05D008703 ORTHO05D006961 2.9e-06 55.1 81 42.0
C05p32370 Brassica napus HOM05D008703 ORTHO05D006961 5.0e-06 54.3 81 42.0
BolC5t31968H Brassica oleracea HOM05D008703 ORTHO05D006961 5.0e-06 54.3 81 42.0
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 5.0e-06 54.3 82 42.7
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 6.5e-06 53.9 84 40.5
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 6.5e-06 53.9 85 36.5
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 6.5e-06 53.9 88 38.6
Thhalv10009230m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 8.5e-06 53.5 85 40.0
Sed0021198 Sechium edule HOM05D018156 ORTHO05D006961 8.5e-06 53.5 84 44.0


User provided reference genes

Program Settings