Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G11460 Aethionema arabicum HOM05D008703 ORTHO05D006961 5.0e-38 160.6 80 100.0
Aa31LG9G11510 Aethionema arabicum HOM05D008703 ORTHO05D006961 4.6e-36 154.1 80 96.2
Aa31LG9G11540 Aethionema arabicum HOM05D008703 ORTHO05D006961 3.1e-32 141.4 80 90.0
Sp6g06920 Schrenkiella parvula HOM05D008703 ORTHO05D006961 1.1e-10 69.7 78 50.0
AL6G44550 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 2.0e-10 68.9 80 56.2
Sp6g06940 Schrenkiella parvula HOM05D008703 ORTHO05D006961 7.5e-10 67.0 77 50.6
BcaB04g17983 Brassica carinata HOM05D008703 ORTHO05D006961 1.1e-08 63.2 82 47.6
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.1e-08 63.2 87 46.0
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 4.1e-08 61.2 80 42.5
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 5.3e-08 60.8 88 43.2
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 7.0e-08 60.5 84 46.4
CARHR256120 Cardamine hirsuta HOM05D008703 ORTHO05D006961 9.1e-08 60.1 80 50.0
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 9.1e-08 60.1 90 38.9
ClCG01G001400 Citrullus lanatus HOM05D018156 ORTHO05D006961 1.6e-07 59.3 84 40.5
Thhalv10029203m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.6e-07 59.3 80 48.8
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.6e-07 59.3 82 46.3
AL1G47200 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 2.7e-07 58.5 82 40.2
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 3.5e-07 58.2 83 42.2
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 4.5e-07 57.8 90 35.6
Sed0012511 Sechium edule HOM05D018156 ORTHO05D006961 4.5e-07 57.8 87 41.4
A09p33480 Brassica napus HOM05D008703 ORTHO05D006961 5.9e-07 57.4 81 44.4
BraA09t38890Z Brassica rapa HOM05D008703 ORTHO05D006961 5.9e-07 57.4 81 44.4
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 7.7e-07 57.0 85 43.5
A08p09220 Brassica napus HOM05D008703 ORTHO05D006961 7.7e-07 57.0 80 38.8
BraA08t32922Z Brassica rapa HOM05D008703 ORTHO05D006961 7.7e-07 57.0 80 38.8
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 7.7e-07 57.0 82 45.1
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 7.7e-07 57.0 88 40.9
Aa31LG6G7510 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.0e-06 56.6 83 45.8
BcaC05g27315 Brassica carinata HOM05D008703 ORTHO05D006961 1.0e-06 56.6 81 43.2
BcaC07g37617 Brassica carinata HOM05D008703 ORTHO05D006961 1.0e-06 56.6 80 38.8
BolC8t47976H Brassica oleracea HOM05D008703 ORTHO05D006961 1.0e-06 56.6 80 38.8
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 1.3e-06 56.2 84 41.7
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 1.3e-06 56.2 88 40.9
C05p32370 Brassica napus HOM05D008703 ORTHO05D006961 1.7e-06 55.8 81 43.2
BolC5t31968H Brassica oleracea HOM05D008703 ORTHO05D006961 1.7e-06 55.8 81 43.2
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 1.7e-06 55.8 88 40.9
Sed0021198 Sechium edule HOM05D018156 ORTHO05D006961 2.2e-06 55.5 84 45.2
Thhalv10009230m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 3.8e-06 54.7 85 41.2
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 5.0e-06 54.3 83 38.6
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 5.0e-06 54.3 88 39.8
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 6.5e-06 53.9 92 40.2
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 6.5e-06 53.9 90 42.2
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 6.5e-06 53.9 90 42.2
BcaC07g37618 Brassica carinata HOM05D008703 ORTHO05D006961 8.5e-06 53.5 80 37.5
Thhalv10009241m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 8.5e-06 53.5 80 36.2
Sed0004803 Sechium edule HOM05D018156 ORTHO05D006961 8.5e-06 53.5 87 39.1


User provided reference genes

Program Settings