Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G11210 Aethionema arabicum HOM05D012458 ORTHO05D014337 4.1e-75 284.6 143 100.0
BcaB05g23873 Brassica carinata HOM05D012458 ORTHO05D014337 2.2e-36 156.0 144 61.1
Thhalv10029446m.g Eutrema salsugineum HOM05D012458 ORTHO05D014337 2.2e-36 156.0 152 60.5
Sp6g06590 Schrenkiella parvula HOM05D012458 ORTHO05D014337 2.8e-36 155.6 141 61.7
AL6G45000 Arabidopsis lyrata HOM05D012458 ORTHO05D014337 4.1e-35 151.8 152 61.2
Carub.0006s2965 Capsella rubella HOM05D012458 ORTHO05D014337 2.7e-34 149.1 151 59.6
AT4G10910 Arabidopsis thaliana HOM05D012458 ORTHO05D014337 2.3e-33 146.0 123 65.9
A02p26440 Brassica napus HOM05D012458 ORTHO05D014337 1.2e-31 140.2 144 58.3
C02p42040 Brassica napus HOM05D012458 ORTHO05D014337 1.2e-31 140.2 144 58.3
BraA02t07647Z Brassica rapa HOM05D012458 ORTHO05D014337 1.2e-31 140.2 144 58.3
CARHR255700 Cardamine hirsuta HOM05D012458 ORTHO05D014337 1.6e-31 139.8 150 58.0
BolC2t10239H Brassica oleracea HOM05D012458 ORTHO05D014337 2.8e-31 139.0 144 57.6
BcaC03g16381 Brassica carinata HOM05D012458 ORTHO05D014337 9.8e-29 130.6 125 61.6
THA.LOC104813045 Tarenaya hassleriana HOM05D012458 ORTHO05D014337 2.3e-22 109.4 165 47.3
Cpa.g.sc634.4 Carica papaya HOM05D002255 ORTHO05D002288 2.1e-10 69.7 163 36.2
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 3.3e-08 62.4 49 65.3
Actinidia22177 Actinidia chinensis HOM05D002255 ORTHO05D002288 4.3e-08 62.0 166 31.9
MELO3C016274.2 Cucumis melo HOM05D002255 ORTHO05D002288 9.5e-08 60.8 53 60.4
PGSC0003DMG400005843 Solanum tuberosum HOM05D002255 ORTHO05D002288 9.5e-08 60.8 81 42.0
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 1.2e-07 60.5 53 60.4
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 1.6e-07 60.1 81 40.7
ECA246G0612 Erigeron canadensis HOM05D002255 ORTHO05D002288 2.1e-07 59.7 56 55.4
Rhsim02G0246900 Rhododendron simsii HOM05D002255 ORTHO05D002288 2.8e-07 59.3 55 54.5
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 3.6e-07 58.9 155 30.3
Sopen08g004240 Solanum pennellii HOM05D002255 ORTHO05D002288 3.6e-07 58.9 157 32.5
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 6.2e-07 58.2 47 59.6
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 8.1e-07 57.8 56 51.8
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 8.1e-07 57.8 62 48.4
HanXRQChr17g0534981 Helianthus annuus HOM05D002255 ORTHO05D002288 8.1e-07 57.8 60 53.3
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 1.1e-06 57.4 57 50.9
Nn1g00261 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.1e-06 57.4 90 43.3
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 1.1e-06 57.4 50 54.0
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 1.4e-06 57.0 52 51.9
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 1.4e-06 57.0 51 52.9
Lalb_Chr05g0224011 Lupinus albus HOM05D002255 ORTHO05D002288 3.1e-06 55.8 157 27.4
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.0e-06 55.5 149 31.5
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 4.0e-06 55.5 49 53.1
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 4.0e-06 55.5 57 50.9
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 4.0e-06 55.5 62 43.5
Lj2P163T54 Lonicera japonica HOM05D002255 ORTHO05D002288 5.2e-06 55.1 47 59.6
MBI06_g13416_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 5.2e-06 55.1 58 48.3
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 5.2e-06 55.1 51 52.9
CSS0048832 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 6.8e-06 54.7 53 50.9
COL.COLO4_10731 Corchorus olitorius HOM05D002255 ORTHO05D002288 6.8e-06 54.7 60 45.0
Nn3g18976 Nelumbo nucifera HOM05D002255 ORTHO05D002288 6.8e-06 54.7 55 52.7
Psat7g024880 Pisum sativum HOM05D002255 ORTHO05D002288 6.8e-06 54.7 156 29.5
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 8.9e-06 54.3 57 49.1


User provided reference genes

Program Settings