Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G11080 Aethionema arabicum HOM05D011111 ORTHO05D001112 2.4e-240 835.1 426 100.0
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 1.1e-120 437.6 343 69.1
AL1G18540 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 9.7e-40 168.7 194 41.8
BcaC02g11176 Brassica carinata HOM05D011111 ORTHO05D001112 4.8e-39 166.4 192 41.7
BcaC03g14054 Brassica carinata HOM05D011111 ORTHO05D001112 3.1e-38 163.7 197 40.1
BcaC01g01706 Brassica carinata HOM05D011111 ORTHO05D001112 9.1e-38 162.2 193 40.9
SpUn0438_0010 Schrenkiella parvula HOM05D012374 ORTHO05D017111 3.6e-34 150.2 193 42.0
Aa31LG7G14910 Aethionema arabicum HOM05D011111 ORTHO05D001112 7.9e-34 149.1 197 39.6
AL7G51780 Arabidopsis lyrata HOM05D013448 ORTHO05D001112 6.7e-33 146.0 203 35.0
BolC8t47023H Brassica oleracea HOM05D011111 ORTHO05D001112 5.7e-32 142.9 187 37.4
SpUn0194_0010 Schrenkiella parvula HOM05D012374 ORTHO05D017111 5.9e-29 132.9 198 38.4
BolC4t26199H Brassica oleracea HOM05D011111 ORTHO05D001112 1.5e-27 128.3 170 37.1
A08p28740 Brassica napus HOM05D009700 ORTHO05D001112 2.0e-24 117.9 196 31.6
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.4e-22 111.7 193 28.5
Thhalv10003118m.g Eutrema salsugineum HOM05D012374 ORTHO05D008836 3.1e-22 110.5 169 34.9
BolC9t57792H Brassica oleracea HOM05D001086 ORTHO05D001112 4.1e-22 110.2 194 30.4
Aa31LG7G10430 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.5e-21 107.1 198 29.8
Aa31sc86G70 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.5e-21 107.1 198 29.8
Aa31sc224G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.0e-20 105.5 188 30.9
Aa31LG6G10910 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.3e-20 105.1 167 32.3
BcaB07g32443 Brassica carinata HOM05D012097 ORTHO05D014485 1.7e-20 104.8 167 37.1
THA.LOC104825261 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 2.2e-20 104.4 201 29.4
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 3.8e-20 103.6 202 27.2
Aa31LG1G7000 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.5e-20 102.4 185 30.8
BolC1t03761H Brassica oleracea HOM05D006180 ORTHO05D008836 1.1e-19 102.1 168 31.0
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 1.1e-19 102.1 189 29.1
THA.LOC109117165 Tarenaya hassleriana HOM05D013951 ORTHO05D000001 1.5e-19 101.7 198 30.3
BolC2t09131H Brassica oleracea HOM05D006180 ORTHO05D008836 3.2e-19 100.5 149 34.2
THA.LOC104814055 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 5.5e-19 99.8 198 30.3
Aa31sc626G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.2e-19 99.4 181 30.9
Aa31sc404G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.4e-19 99.0 168 32.7
Aa31LG8G10170 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-18 98.6 196 30.6
Aa31LG8G12290 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-18 98.6 198 30.3
Aa31sc17G220 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-18 98.6 204 28.9
BcaC08g44330 Brassica carinata HOM05D011111 ORTHO05D001112 1.2e-18 98.6 120 41.7
Sp1g31860 Schrenkiella parvula HOM05D011111 ORTHO05D001112 1.2e-18 98.6 173 32.4
BcaC04g20770 Brassica carinata HOM05D011111 ORTHO05D001112 1.6e-18 98.2 121 42.1
THA.LOC109117171 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 1.6e-18 98.2 198 29.8
Aa31LG4G12630 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.7e-18 97.4 199 29.1
BolC5t29748H Brassica oleracea HOM05D011111 ORTHO05D001112 3.6e-18 97.1 123 39.8
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.7e-18 96.7 176 26.7
Aa31sc1092G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.0e-18 95.9 191 30.4
Carub.0006s2726 Capsella rubella HOM05D001086 ORTHO05D001112 8.0e-18 95.9 145 27.6
Aa31sc108G50 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-17 94.7 167 30.5
Aa31sc1568G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-17 94.7 167 32.9
Aa31LG2G17100 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-17 94.4 187 27.3
Aa31LG6G10220 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.0e-17 94.0 201 28.4
BcaC06g33763 Brassica carinata HOM05D011111 ORTHO05D001112 5.2e-17 93.2 121 42.1
BolC8t47705H Brassica oleracea HOM05D006180 ORTHO05D008836 6.8e-17 92.8 230 27.4
Aa31sc157G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-16 92.0 174 31.0
Aa31sc28G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.6e-16 90.9 185 31.9
BcaB06g26776 Brassica carinata HOM05D012097 ORTHO05D014485 2.6e-16 90.9 155 32.3
Aa31LG7G11860 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.8e-16 89.0 218 27.5
BcaB02g10138 Brassica carinata HOM05D011111 ORTHO05D001112 9.8e-16 89.0 84 41.7
SpUn0001_0790 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.3e-15 88.6 195 25.6
THA.LOC104810178 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 1.7e-15 88.2 170 28.8
THA.LOC109117072 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 1.7e-15 88.2 194 29.4
Aa31LG10G9020 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.2e-15 87.8 196 30.6
Aa31sc465G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.8e-15 87.4 185 30.8
Aa31sc641G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.7e-15 87.0 176 34.1
Aa31sc94G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.8e-15 86.7 185 29.7
BolC3t19745H Brassica oleracea HOM05D012374 ORTHO05D008836 4.8e-15 86.7 182 30.8
Aa31sc42G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.3e-15 86.3 210 29.5
Aa31LG5G23470 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.3e-15 85.9 156 30.1
Aa31LG2G16700 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-14 85.5 181 30.4
THA.LOC104813232 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 2.4e-14 84.3 217 26.3
BolC5t33130H Brassica oleracea HOM05D001086 ORTHO05D001112 3.1e-14 84.0 195 26.7
Aa31sc70G40 Aethionema arabicum HOM05D009700 ORTHO05D012032 7.0e-14 82.8 193 27.5
Aa31LG1G8140 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.1e-14 82.4 162 30.9
Aa31csc271G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.0e-12 79.0 164 29.3
SpUn0248_0010 Schrenkiella parvula HOM05D013448 ORTHO05D021414 1.0e-12 79.0 162 30.2
Aa31sc267G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.7e-12 78.2 140 30.0
Aa31sc911G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.7e-12 78.2 199 25.6
THA.LOC104803132 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 6.5e-12 76.3 166 26.5
Aa31LG3G7270 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-11 75.5 208 25.0
Aa31sc47G60 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-11 75.5 141 30.5
BcaC01g03172 Brassica carinata HOM05D011111 ORTHO05D001112 1.1e-11 75.5 78 43.6
Aa31LG10G10110 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.2e-11 72.8 142 28.9
Aa31sc128G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.4e-11 72.4 125 29.6
Aa31sc495G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.4e-11 72.4 162 28.4
AT4G11100 Arabidopsis thaliana HOM05D012014 ORTHO05D015362 9.4e-11 72.4 214 33.2
THA.LOC104808355 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 9.4e-11 72.4 176 27.8
Aa31LG8G10870 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-10 71.6 165 26.7
AL6G45250 Arabidopsis lyrata HOM05D012014 ORTHO05D015362 1.6e-10 71.6 195 33.8
BolC8t48430H Brassica oleracea HOM05D011111 ORTHO05D001112 2.7e-10 70.9 69 42.0
Aa31sc1072G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.6e-10 70.5 204 26.0
Aa31sc38G140 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.6e-10 70.5 216 24.1
BolC7t43939H Brassica oleracea HOM05D009982 ORTHO05D006374 3.6e-10 70.5 84 35.7
SpUn0005_0100 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.6e-10 70.5 121 33.1
Aa31sc189G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.7e-10 70.1 172 25.6
Aa31sc908G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.1e-10 69.7 205 24.4
BolC2t10560H Brassica oleracea HOM05D001086 ORTHO05D001112 6.1e-10 69.7 172 23.8
arahy.Tifrunner.gnm1.ann1.N7XK3P Arachis hypogaea HOM05D000420 ORTHO05D000110 8.0e-10 69.3 159 26.4
arahy.Tifrunner.gnm1.ann1.PJQ1Y5 Arachis hypogaea HOM05D000420 ORTHO05D000110 8.0e-10 69.3 159 26.4
AL5G22930 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 1.0e-09 68.9 76 44.7
BolC7t41119H Brassica oleracea HOM05D001086 ORTHO05D001112 1.4e-09 68.6 226 27.0
Aa31sc226G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-09 68.2 203 24.6
BolC7t43497H Brassica oleracea HOM05D001086 ORTHO05D001112 1.8e-09 68.2 222 24.8
BolC9t54058H Brassica oleracea HOM05D009982 ORTHO05D006374 1.8e-09 68.2 84 34.5
Aa31sc639G50 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-09 67.8 162 27.2
Aa31csc81G50 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.0e-09 67.0 108 30.6
Aa31sc1809G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.0e-09 67.0 119 30.3
Carub.0007s2114 Capsella rubella HOM05D019554 ORTHO05D023623 4.0e-09 67.0 98 34.7
Aa31LG3G7520 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.2e-09 66.6 198 25.8
Aa31sc350G60 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.2e-09 66.6 142 28.9
BolC3t19236H Brassica oleracea HOM05D009982 ORTHO05D006374 5.2e-09 66.6 82 34.1
A02p24700 Brassica napus HOM05D030042 ORTHO05D027534 1.2e-08 65.5 88 38.6
Aa31LG5G24150 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.4e-08 63.9 189 28.0
Hund09997 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.4e-08 63.9 165 26.1
Aa31sc463G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.4e-08 63.5 243 24.7
Sp6g06340 Schrenkiella parvula HOM05D012014 ORTHO05D015362 4.4e-08 63.5 225 32.4
BcaB01g04231 Brassica carinata HOM05D018744 ORTHO05D000062 5.7e-08 63.2 148 27.7
TWI79G0823 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 1.3e-07 62.0 159 24.5
Aa31sc211G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.7e-07 61.6 91 34.1
Sp1g30270 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.7e-07 61.6 125 32.0
AL1G67350 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 2.8e-07 60.8 78 33.3
AL3G41440 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 2.8e-07 60.8 78 33.3
Sp3g26200 Schrenkiella parvula HOM05D012905 ORTHO05D013733 2.8e-07 60.8 105 33.3
AL8G21750 Arabidopsis lyrata HOM05D018522 ORTHO05D015915 6.3e-07 59.7 87 33.3
BcaB08g37466 Brassica carinata HOM05D014639 ORTHO05D018596 6.3e-07 59.7 80 40.0
BcaB08g36733 Brassica carinata HOM05D014639 ORTHO05D018596 8.3e-07 59.3 54 48.1
BraA02t07480Z Brassica rapa HOM05D001086 ORTHO05D001112 8.3e-07 59.3 121 25.6
Sp2g08160 Schrenkiella parvula HOM05D008134 ORTHO05D006374 8.3e-07 59.3 174 25.3
THA.LOC104798935 Tarenaya hassleriana HOM05D013951 ORTHO05D011833 8.3e-07 59.3 58 50.0
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 8.3e-07 59.3 58 50.0
Thhalv10028873m.g Eutrema salsugineum HOM05D012014 ORTHO05D015362 1.1e-06 58.9 235 28.1
TWI36G1173 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 1.1e-06 58.9 159 23.3
TWI53G0463 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 1.1e-06 58.9 159 22.6
Aa31LG11G8500 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-06 58.2 97 29.9
AL5G18360 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.8e-06 58.2 78 33.3
BcaC08g43261 Brassica carinata HOM05D001086 ORTHO05D001112 1.8e-06 58.2 110 26.4
BolC2t09008H Brassica oleracea HOM05D001086 ORTHO05D001112 2.4e-06 57.8 164 23.8
AUR62008540 Chenopodium quinoa HOM05D000662 ORTHO05D014086 2.4e-06 57.8 124 26.6
Aa31csc275G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.1e-06 57.4 148 25.7
Aa31LG4G11620 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.0e-06 56.2 208 23.6
Aa31sc91G50 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.0e-06 56.2 171 25.7
BcaB03g16326 Brassica carinata HOM05D014639 ORTHO05D018596 7.0e-06 56.2 54 42.6
BolC1t01667H Brassica oleracea HOM05D001086 ORTHO05D001112 7.0e-06 56.2 108 25.9
SpUn0001_0130 Schrenkiella parvula HOM05D008134 ORTHO05D006374 9.1e-06 55.8 152 26.3


User provided reference genes

Program Settings