Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 4.2e-276 954.1 507 100.0
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 4.5e-185 651.7 1038 44.4
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 5.0e-160 568.5 345 89.3
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 1.3e-123 447.6 1042 34.1
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 2.9e-123 446.4 1043 34.0
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 6.4e-123 445.3 1038 34.0
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 1.7e-120 437.2 1015 34.1
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 1.5e-119 434.1 325 72.0
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 3.3e-119 433.0 348 69.3
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.4e-117 427.6 1019 33.6
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 4.0e-117 426.0 340 68.8
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 4.0e-117 426.0 340 68.8
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 5.2e-117 425.6 340 69.4
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 2.1e-113 413.7 320 71.2
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 1.6e-110 404.1 340 67.9
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 5.6e-95 352.4 452 50.0
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.7e-67 261.2 341 46.9
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 1.9e-66 257.7 328 47.3
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 7.2e-66 255.8 330 45.8
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 7.9e-65 252.3 312 46.8
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 1.8e-64 251.1 331 45.6
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 2.3e-64 250.8 322 46.0
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 3.0e-64 250.4 422 41.0
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 5.1e-64 249.6 362 43.4
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 2.5e-63 247.3 338 44.7
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 3.3e-63 246.9 432 40.3
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 2.8e-62 243.8 362 43.1
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 4.8e-62 243.0 316 44.6
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 4.8e-62 243.0 330 44.2
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 1.4e-61 241.5 322 47.5
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.4e-61 240.7 323 48.0
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 2.4e-61 240.7 331 43.2
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 4.1e-61 240.0 322 46.6
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 4.1e-61 240.0 344 43.9
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 5.9e-60 236.1 326 47.5
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.0e-59 235.3 330 43.3
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 2.9e-59 233.8 309 45.3
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 3.8e-59 233.4 321 44.5
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 3.8e-59 233.4 319 45.8
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 5.0e-59 233.0 337 41.8
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 5.0e-59 233.0 336 44.9
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.5e-59 232.6 335 45.7
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 6.5e-59 232.6 335 44.2
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 6.5e-59 232.6 327 44.3
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 8.5e-59 232.3 350 42.6
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.1e-58 231.9 334 43.7
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.1e-58 231.9 324 45.7
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.4e-58 231.5 325 44.9
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 3.2e-58 230.3 347 42.7
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 5.5e-58 229.6 320 42.2
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 5.5e-58 229.6 336 44.6
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 9.4e-58 228.8 299 45.8
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 2.1e-57 227.6 313 45.4
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 2.1e-57 227.6 320 42.8
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 6.1e-57 226.1 342 43.9
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 6.1e-57 226.1 360 40.8
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 1.0e-56 225.3 345 42.3
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 1.4e-56 224.9 401 40.1
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 2.3e-56 224.2 333 42.3
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 3.0e-56 223.8 315 42.2
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 5.1e-56 223.0 359 41.8
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 1.1e-55 221.9 324 43.2
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 1.1e-55 221.9 349 39.8
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 2.6e-55 220.7 322 41.0
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 3.3e-55 220.3 338 43.2
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 2.2e-54 217.6 323 43.3
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 8.2e-54 215.7 342 41.2
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 7.0e-53 212.6 319 42.9
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 3.2e-50 203.8 327 41.3
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 7.2e-50 202.6 326 38.3
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 7.2e-50 202.6 317 43.5
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 1.2e-49 201.8 324 41.0
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 4.7e-49 199.9 325 38.5
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 6.1e-49 199.5 325 39.1
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 1.0e-48 198.7 351 37.6
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 1.0e-48 198.7 326 37.1
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 4.0e-48 196.8 315 39.7
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 6.7e-48 196.1 317 41.6
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 2.6e-47 194.1 326 36.5
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 9.7e-47 192.2 326 36.8
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 2.2e-46 191.0 331 38.1
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 1.4e-45 188.3 326 37.4
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.8e-45 188.0 333 39.6
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 3.1e-45 187.2 339 35.4
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 4.1e-45 186.8 161 58.4
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 4.5e-44 183.3 163 55.8
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 7.7e-44 182.6 169 56.2
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 7.7e-44 182.6 305 40.3
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 2.9e-43 180.6 169 53.3
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 8.5e-43 179.1 319 36.4
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 7.2e-42 176.0 342 36.0
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 1.2e-41 175.3 163 55.2
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 3.6e-41 173.7 379 34.0
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 3.6e-41 173.7 163 55.8
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 3.0e-40 170.6 319 36.4
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 1.2e-39 168.7 170 52.4
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.2e-39 168.7 324 36.1
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 1.3e-38 165.2 227 44.1
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 3.7e-38 163.7 161 50.3
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 6.3e-38 162.9 161 50.9
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 8.3e-38 162.5 160 55.0
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 3.5e-36 157.1 313 36.4
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 5.0e-35 153.3 328 33.2
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 1.3e-30 138.7 170 43.5
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 1.1e-29 135.6 142 50.7
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 7.0e-29 132.9 107 57.9
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 1.2e-23 115.5 174 39.1
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 2.2e-22 111.3 129 52.7
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 2.2e-22 111.3 129 52.7
Cpa.g.sc25.3 Carica papaya HOM05D002451 ORTHO05D005601 1.6e-20 105.1 96 53.1
CSS0026050 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 3.0e-19 100.9 96 53.1
CSS0028178 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 3.0e-19 100.9 96 53.1
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 3.0e-19 100.9 157 36.9
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.5e-15 88.6 98 44.9
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 3.4e-15 87.4 73 63.0
TAR624G0921 Trochodendron aralioides HOM05D002451 ORTHO05D005601 4.4e-15 87.0 132 43.2
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 1.9e-13 81.6 73 54.8
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 3.2e-13 80.9 161 34.8
SHI11089 Sapria himalayana HOM05D002451 ORTHO05D005601 7.8e-12 76.3 73 57.5
HPP92_007804 Vanilla planifolia HOM05D002451 ORTHO05D005601 5.6e-10 70.1 127 36.2
SGA_v2.0_scaffold123G33404 Striga asiatica HOM05D002451 ORTHO05D005601 7.3e-10 69.7 93 41.9
Hund28828 Selenicereus undatus HOM05D002451 ORTHO05D005601 6.2e-09 66.6 68 48.5
Hund28869 Selenicereus undatus HOM05D002451 ORTHO05D005601 6.2e-09 66.6 64 50.0
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 1.8e-08 65.1 141 33.3
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 1.7e-06 58.5 170 32.4


User provided reference genes

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