Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 5.0e-260 900.6 460 100.0
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 8.0e-157 557.8 467 65.7
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 2.8e-154 549.3 464 64.9
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 3.6e-149 532.3 445 65.6
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 2.3e-148 529.6 471 62.6
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 8.3e-146 521.2 467 62.7
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 3.2e-145 519.2 461 62.5
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 3.0e-127 459.5 435 61.6
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 3.9e-127 459.1 474 58.2
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 4.3e-126 455.7 438 61.4
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 4.3e-126 455.7 438 61.4
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 4.3e-126 455.7 438 61.4
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 7.3e-126 454.9 463 58.7
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 1.3e-122 444.1 464 54.1
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 1.8e-76 290.8 444 43.2
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 9.7e-70 268.5 466 41.4
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 9.7e-70 268.5 475 40.6
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 3.7e-69 266.5 464 40.1
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 8.2e-69 265.4 464 39.7
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 1.2e-67 261.5 455 39.6
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 1.5e-67 261.2 467 40.5
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 1.5e-67 261.2 468 40.2
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 4.5e-67 259.6 451 41.2
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 5.9e-67 259.2 470 39.6
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 7.7e-67 258.8 444 41.0
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 7.7e-67 258.8 444 41.0
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 2.9e-66 256.9 471 38.9
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 6.5e-66 255.8 474 38.6
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.1e-65 255.0 444 39.6
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 1.1e-65 255.0 464 40.3
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 2.5e-65 253.8 458 40.4
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 2.1e-64 250.8 452 40.3
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 3.6e-64 250.0 478 38.1
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 6.1e-64 249.2 461 39.0
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 6.7e-63 245.7 467 38.1
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 4.4e-62 243.0 435 39.1
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 4.4e-62 243.0 425 39.8
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.3e-61 241.5 466 37.6
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.7e-61 241.1 454 39.0
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 6.3e-61 239.2 457 38.5
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 1.4e-60 238.0 458 38.2
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 1.8e-60 237.7 479 38.8
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 3.1e-60 236.9 443 39.3
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 2.6e-59 233.8 477 37.3
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 8.5e-58 228.8 466 38.4
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 1.1e-57 228.4 448 38.2
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 1.9e-57 227.6 461 36.9
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 9.4e-57 225.3 459 38.1
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.6e-56 224.6 448 37.9
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 1.0e-55 221.9 443 37.5
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 1.4e-55 221.5 454 38.3
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 1.8e-55 221.1 459 35.7
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 2.3e-55 220.7 488 35.9
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 5.2e-55 219.5 475 35.8
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 5.2e-55 219.5 464 36.6
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 1.2e-54 218.4 454 37.4
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 1.5e-54 218.0 446 37.0
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 4.4e-54 216.5 449 37.6
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 2.2e-53 214.2 481 36.0
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 4.8e-53 213.0 481 35.6
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 6.3e-53 212.6 399 38.8
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.4e-52 210.7 446 37.2
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.4e-52 210.7 446 37.2
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 4.1e-52 209.9 496 35.3
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 5.3e-52 209.5 464 35.8
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 5.3e-52 209.5 451 34.8
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 7.0e-52 209.1 459 34.6
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 9.1e-52 208.8 461 35.8
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 2.7e-51 207.2 469 35.4
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 3.5e-51 206.8 477 35.2
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 5.9e-51 206.1 502 37.1
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 7.7e-51 205.7 470 35.3
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 1.0e-50 205.3 493 33.7
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 3.8e-50 203.4 424 38.4
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 6.5e-50 202.6 471 34.4
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 6.5e-50 202.6 492 35.2
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 1.1e-49 201.8 427 36.8
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 4.2e-49 199.9 462 35.1
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 5.5e-49 199.5 457 35.2
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 1.0e-47 195.3 435 35.9
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 1.0e-47 195.3 492 34.1
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 1.4e-47 194.9 423 35.9
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 5.2e-47 193.0 438 35.8
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 6.8e-47 192.6 484 34.1
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.5e-46 191.4 466 32.6
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.5e-46 191.4 456 33.8
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 2.2e-45 187.6 458 35.6
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 3.7e-45 186.8 441 32.4
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 3.7e-45 186.8 456 33.3
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 2.4e-44 184.1 462 34.6
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 3.1e-44 183.7 452 34.1
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 1.2e-43 181.8 452 35.0
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 5.9e-43 179.5 460 33.9
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 1.0e-42 178.7 456 33.8
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 5.0e-42 176.4 451 33.7
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.3e-41 173.7 460 33.7
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.1e-40 171.0 456 32.9
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 2.1e-40 171.0 450 33.6
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 6.1e-40 169.5 437 34.1
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.8e-39 167.9 427 33.3
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 2.9e-34 150.6 430 31.4
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 7.3e-33 146.0 345 35.1
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 2.6e-30 137.5 348 34.5
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 9.8e-30 135.6 444 30.9
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 1.7e-26 124.8 234 39.7
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 1.4e-23 115.2 365 31.0
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 1.2e-22 112.1 277 36.1
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 3.4e-22 110.5 480 26.5
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 5.0e-18 96.7 204 36.8
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 5.0e-18 96.7 184 36.4
BolC3t15911H Brassica oleracea HOM05D006741 ORTHO05D008434 8.6e-18 95.9 269 33.5
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 1.6e-16 91.7 492 26.6
C03p36010 Brassica napus HOM05D006741 ORTHO05D008434 2.8e-16 90.9 287 32.4
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 3.5e-11 73.9 141 37.6
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 6.0e-11 73.2 231 29.9
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.2e-08 65.5 165 33.9
ECA234G0697 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.5e-06 58.5 121 37.2
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 2.6e-06 57.8 65 43.1


User provided reference genes

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