Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 1.2e-135 486.5 247 100.0
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 2.5e-125 452.2 247 91.5
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 2.5e-125 452.2 247 91.5
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 2.5e-125 452.2 247 91.5
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 2.5e-125 452.2 247 91.5
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 4.3e-125 451.4 247 91.5
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 4.3e-125 451.4 247 91.1
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 9.7e-125 450.3 247 91.1
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 9.7e-125 450.3 247 91.1
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 9.7e-125 450.3 247 91.1
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 9.7e-125 450.3 247 91.1
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 1.3e-124 449.9 247 90.7
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 1.6e-124 449.5 247 91.1
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 1.6e-124 449.5 247 91.5
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 2.8e-124 448.7 247 90.7
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 2.8e-124 448.7 247 90.7
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 3.7e-124 448.4 247 90.3
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 4.8e-124 448.0 247 90.7
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 4.8e-124 448.0 245 91.4
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 90.3
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 90.3
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 91.1
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 90.3
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 90.3
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 1.8e-123 446.0 247 89.9
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 90.7
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 4.1e-123 444.9 245 89.0
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 89.5
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 5.3e-123 444.5 248 90.7
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 5.3e-123 444.5 245 90.6
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 5.3e-123 444.5 247 89.9
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 1.2e-122 443.4 244 88.9
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 1.2e-122 443.4 247 89.9
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 88.2
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 88.7
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.5e-122 443.0 245 89.4
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 89.8
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 88.3
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 88.3
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 88.3
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 90.3
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 87.9
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 87.9
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 87.4
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 87.9
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 5.9e-122 441.0 245 89.0
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 5.9e-122 441.0 243 89.7
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 5.9e-122 441.0 246 88.6
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 89.0
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 87.8
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.0e-121 440.3 247 89.5
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 1.7e-121 439.5 248 89.5
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.7e-121 439.5 243 89.3
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 2.2e-121 439.1 247 88.7
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 2.2e-121 439.1 247 87.9
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 2.9e-121 438.7 245 88.6
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 2.9e-121 438.7 245 88.2
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 2.9e-121 438.7 245 87.8
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 3.8e-121 438.3 247 88.3
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 88.3
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 88.3
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 87.9
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 87.4
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 88.6
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 88.6
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 88.2
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 8.5e-121 437.2 246 87.4
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 8.5e-121 437.2 247 87.9
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 8.5e-121 437.2 246 87.4
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 8.5e-121 437.2 247 88.7
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.1e-120 436.8 246 87.0
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 88.6
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 88.6
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 88.6
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 88.6
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 87.3
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 88.7
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 2.5e-120 435.6 248 87.9
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 2.5e-120 435.6 248 87.9
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 2.5e-120 435.6 243 87.7
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 2.5e-120 435.6 247 88.3
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.5e-120 435.6 245 86.9
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 2.5e-120 435.6 247 87.9
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 2.5e-120 435.6 246 87.8
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 3.2e-120 435.3 247 87.9
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.2e-120 435.3 245 88.2
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 87.4
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 4.2e-120 434.9 245 87.3
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 87.4
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 5.5e-120 434.5 246 87.4
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 88.2
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 2.1e-119 432.6 243 87.2
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 2.1e-119 432.6 246 87.8
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 2.7e-119 432.2 246 86.6
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 3.6e-119 431.8 245 87.8
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 4.6e-119 431.4 245 86.9
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 4.6e-119 431.4 246 88.6
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 4.6e-119 431.4 252 85.7
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 245 86.5
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 245 86.1
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 6.1e-119 431.0 245 86.1
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 6.1e-119 431.0 248 87.1
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 248 87.1
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 7.9e-119 430.6 245 86.1
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.0e-118 430.3 248 86.7
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 1.0e-118 430.3 245 86.1
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 1.0e-118 430.3 244 87.7
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.4e-118 429.9 245 86.9
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 2.3e-118 429.1 245 86.9
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 3.9e-118 428.3 248 86.7
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 3.9e-118 428.3 244 86.1
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 5.1e-118 427.9 269 81.4
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 6.7e-118 427.6 245 86.5
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 8.8e-118 427.2 245 86.1
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 8.8e-118 427.2 245 85.3
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.1e-117 426.8 246 85.8
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 7.4e-117 424.1 246 85.8
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 9.7e-117 423.7 248 87.1
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 1.7e-116 422.9 284 77.5
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 9.1e-115 417.2 246 85.0
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.5e-114 416.4 235 88.5
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 2.6e-114 415.6 246 84.6
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 2.6e-114 415.6 260 81.5
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 8.5e-113 410.6 247 85.0
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 8.5e-113 410.6 290 74.1
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 3.2e-112 408.7 304 70.7
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 3.3e-109 398.7 250 79.6
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 8.2e-108 394.0 245 78.8
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 1.1e-107 393.7 332 63.9
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 2.0e-106 389.4 250 77.6
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 4.5e-106 388.3 251 76.9
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 4.5e-106 388.3 252 75.4
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 4.5e-106 388.3 236 83.1
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 2.2e-105 386.0 251 75.3
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 2.9e-105 385.6 252 74.6
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 8.8e-102 374.0 209 86.6
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 8.8e-102 374.0 209 86.6
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 1.7e-100 369.8 213 85.9
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.7e-100 369.8 264 73.1
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 5.3e-99 364.8 359 58.2
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 5.4e-91 338.2 245 71.8
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 3.6e-87 325.5 198 85.9
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.5e-85 320.1 245 71.0
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.3e-84 317.0 245 69.0
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 1.3e-81 307.0 179 86.6
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 6.1e-79 298.1 172 87.8
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 1.8e-78 296.6 164 87.2
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 3.0e-78 295.8 172 87.2
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.2e-77 293.9 163 87.7
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 5.2e-70 268.5 280 54.6
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 1.1e-62 244.2 241 50.2
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.7e-57 226.9 138 82.6
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 5.6e-48 195.3 232 44.0
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 1.5e-45 187.2 250 42.4
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 2.2e-44 183.3 102 89.2
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.9e-44 182.2 245 46.9
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 2.7e-42 176.4 199 54.8
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 7.3e-40 168.3 94 86.2
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 7.1e-35 151.8 163 54.0
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 6.2e-31 138.7 82 81.7
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 1.4e-30 137.5 141 55.3
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 2.2e-28 130.2 84 77.4
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 8.4e-28 128.3 87 75.9
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 7.1e-27 125.2 232 37.5
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.7e-26 123.2 82 78.0
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 3.5e-26 122.9 212 42.9
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 3.2e-19 99.8 99 47.5
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 6.7e-17 92.0 51 86.3
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.7e-15 86.3 57 77.2
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 6.9e-14 82.0 47 76.6
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.5e-13 80.9 51 80.4
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 5.9e-13 79.0 74 59.5
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 5.0e-12 75.9 52 78.8
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 8.4e-12 75.1 79 55.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.7e-10 70.1 106 46.2
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.8e-09 67.4 94 47.9
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 5.1e-09 65.9 45 77.8
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 1.3e-07 61.2 36 77.8
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 1.3e-07 61.2 36 77.8
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 1.3e-07 61.2 36 77.8
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 8.2e-07 58.5 87 47.1
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 2.4e-06 57.0 90 45.6


User provided reference genes

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