Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 5.8e-116 421.4 219 100.0
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 6.3e-70 268.5 223 62.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.5e-66 256.5 226 64.6
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.5e-66 256.5 226 64.6
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 2.5e-66 256.5 227 65.2
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.2e-65 254.2 228 62.7
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.7e-65 253.1 232 56.0
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.0e-64 251.1 222 64.4
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.8e-64 250.4 224 61.2
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.5e-63 247.3 219 61.2
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 4.9e-62 242.3 225 62.2
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 4.9e-62 242.3 228 61.8
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.7e-60 236.5 173 67.6
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 3.0e-51 206.5 212 46.2
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 8.6e-51 204.9 218 45.9
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.9e-50 203.8 228 48.2
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.1e-49 200.3 230 48.7
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.6e-49 199.5 244 45.9
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 3.6e-49 199.5 230 48.7
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 2.3e-48 196.8 230 52.2
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 3.1e-48 196.4 230 48.3
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.2e-47 194.5 242 44.6
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.5e-47 194.1 235 44.3
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.5e-47 194.1 236 46.2
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.4e-47 193.0 242 45.0
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 9.8e-47 191.4 245 45.7
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.9e-45 187.2 212 45.8
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 9.2e-45 184.9 220 45.5
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.6e-44 184.1 182 50.5
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 4.6e-44 182.6 230 47.8
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 6.0e-44 182.2 243 43.6
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.7e-43 180.6 178 53.4
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.7e-43 180.6 220 45.9
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 2.3e-43 180.3 226 42.5
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 3.0e-43 179.9 229 41.9
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 3.0e-43 179.9 233 40.8
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 1.1e-42 177.9 227 51.1
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 1.1e-42 177.9 239 46.4
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.1e-42 177.9 225 44.4
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.1e-42 177.9 225 44.4
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.5e-42 176.8 178 52.8
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 2.5e-42 176.8 218 43.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 3.3e-42 176.4 236 41.5
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 5.6e-42 175.6 231 42.4
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 7.3e-42 175.3 175 52.0
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 7.3e-42 175.3 236 45.8
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 7.3e-42 175.3 240 42.1
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 9.5e-42 174.9 231 44.2
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.2e-41 174.5 215 41.4
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.2e-41 174.5 257 39.7
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.8e-41 173.3 237 43.9
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 6.2e-41 172.2 242 44.6
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 8.1e-41 171.8 188 48.4
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 5.2e-40 169.1 241 42.3
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 6.8e-40 168.7 251 38.2
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.2e-39 167.9 237 44.3
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.0e-39 167.2 214 46.7
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 5.8e-39 165.6 248 39.5
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 1.3e-38 164.5 234 44.4
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 8.3e-38 161.8 180 46.1
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 1.9e-37 160.6 262 34.7
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 4.1e-37 159.5 238 43.7
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 4.1e-37 159.5 228 42.5
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 5.4e-37 159.1 187 41.7
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 5.4e-37 159.1 245 43.3
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 7.1e-37 158.7 236 44.5
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 4.6e-36 156.0 240 40.0
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 4.6e-36 156.0 252 40.1
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 6.6e-35 152.1 264 35.2
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.1e-34 151.4 241 42.7
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.9e-34 150.6 286 35.3
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 2.5e-34 150.2 242 41.3
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 2.5e-34 150.2 192 44.3
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.5e-34 150.2 214 41.1
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.6e-33 147.5 187 41.2
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 4.7e-33 146.0 173 45.7
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 6.2e-33 145.6 173 45.1
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.1e-32 144.8 239 38.1
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 4.0e-32 142.9 225 36.4
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 6.8e-32 142.1 234 41.0
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 2.6e-31 140.2 186 41.9
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 3.4e-31 139.8 229 42.8
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 4.4e-31 139.4 225 41.3
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.1e-28 130.6 242 34.7
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 5.1e-27 125.9 169 44.4
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 5.1e-27 125.9 163 43.6
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.9e-26 124.0 155 43.9
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.2e-25 121.3 152 44.1
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 1.8e-24 117.5 249 32.1
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 2.2e-22 110.5 273 31.5
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 3.2e-21 106.7 225 34.7
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.5e-18 97.8 212 34.9
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.6e-17 93.2 154 44.2
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.4e-16 91.3 105 47.6
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 4.6e-12 76.3 114 43.0
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 5.6e-10 69.3 110 35.5
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 4.5e-07 59.7 74 41.9
BcaC02g12249 Brassica carinata HOM05D007444 ORTHO05D009359 2.2e-06 57.4 39 64.1
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 2.2e-06 57.4 136 28.7


User provided reference genes

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