Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.7e-100 369.4 190 100.0
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 2.0e-82 309.3 190 83.7
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 6.0e-82 307.8 191 83.8
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 4.0e-78 295.0 194 82.5
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 6.8e-78 294.3 191 81.2
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 8.9e-78 293.9 192 81.8
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 8.9e-78 293.9 192 78.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 8.9e-78 293.9 192 78.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 1.2e-77 293.5 192 78.6
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.2e-77 293.5 195 81.0
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 2.2e-76 289.3 192 78.1
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 2.2e-76 289.3 192 78.1
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 7.8e-74 280.8 193 77.7
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 3.0e-73 278.9 190 78.4
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.9e-67 259.6 190 74.2
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.9e-67 259.6 190 74.2
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.9e-67 259.6 190 74.2
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.3e-64 248.8 190 68.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.3e-57 226.1 169 72.8
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 5.1e-57 224.9 169 71.6
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 3.8e-52 208.8 189 60.3
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 2.4e-51 206.1 191 58.1
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 7.1e-51 204.5 189 59.3
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 7.1e-51 204.5 188 59.6
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 4.6e-50 201.8 192 57.8
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 7.9e-50 201.1 183 62.3
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 7.9e-50 201.1 190 58.4
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.0e-49 200.7 188 58.5
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.3e-49 200.3 195 56.4
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.7e-49 199.9 192 58.3
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 2.3e-49 199.5 191 58.1
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 2.3e-49 199.5 192 58.3
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 3.9e-49 198.7 187 61.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 5.1e-49 198.4 190 56.3
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 8.7e-49 197.6 189 59.3
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 8.7e-49 197.6 198 55.6
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.7e-49 197.6 189 57.1
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.9e-48 196.4 194 55.2
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 2.5e-48 196.1 190 58.9
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.3e-48 195.7 192 58.3
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 4.3e-48 195.3 192 57.3
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 4.3e-48 195.3 193 54.9
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.6e-48 194.9 188 57.4
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 7.3e-48 194.5 194 55.7
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 7.3e-48 194.5 187 59.4
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 7.3e-48 194.5 192 56.2
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 9.6e-48 194.1 193 54.4
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 2.8e-47 192.6 187 52.9
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.6e-47 192.2 184 59.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 3.6e-47 192.2 184 59.2
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 3.6e-47 192.2 191 55.0
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 3.6e-47 192.2 194 54.6
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 8.1e-47 191.0 195 54.9
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.1e-46 190.7 189 54.5
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.1e-46 190.7 192 54.2
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.1e-46 190.7 186 55.4
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.1e-46 190.7 188 52.7
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.8e-46 189.9 189 54.5
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 2.4e-46 189.5 186 57.5
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 2.4e-46 189.5 192 53.6
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 3.1e-46 189.1 188 56.9
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 4.0e-46 188.7 135 68.1
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 5.3e-46 188.3 194 55.2
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 5.3e-46 188.3 193 54.9
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.9e-46 188.0 192 53.1
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 9.0e-46 187.6 187 56.1
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.2e-45 187.2 192 53.1
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.5e-45 186.8 191 54.5
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.6e-45 186.0 189 51.9
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.4e-45 185.7 187 55.1
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 4.5e-45 185.3 189 51.9
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 5.8e-45 184.9 190 55.8
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 7.6e-45 184.5 187 55.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 9.9e-45 184.1 198 54.0
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.7e-44 183.3 193 52.8
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.2e-44 183.0 192 51.0
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 2.9e-44 182.6 195 52.3
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.8e-44 182.2 188 53.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 8.4e-44 181.0 190 50.0
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 2.4e-43 179.5 190 53.2
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 3.2e-43 179.1 188 51.6
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 3.2e-43 179.1 188 53.7
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 3.2e-43 179.1 191 52.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 4.2e-43 178.7 190 52.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 5.5e-43 178.3 191 52.9
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 6.0e-42 174.9 189 52.9
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 6.0e-42 174.9 191 53.9
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.0e-41 174.1 166 59.0
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 2.3e-41 172.9 129 66.7
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 8.7e-41 171.0 193 52.3
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.1e-40 170.6 188 49.5
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.3e-40 169.1 195 48.2
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.6e-39 166.8 201 49.8
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.0e-38 162.2 229 44.5
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 4.0e-38 162.2 194 47.4
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 9.0e-38 161.0 113 68.1
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.6e-37 159.5 136 55.9
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.6e-37 159.5 112 67.9
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.4e-35 153.7 192 43.8
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 4.2e-35 152.1 111 64.9
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 2.7e-34 149.4 163 53.4
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.6e-34 148.7 149 51.0
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 5.7e-32 141.7 190 47.4
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 5.3e-30 135.2 189 45.0
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 7.6e-29 131.3 181 42.0
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.7e-28 130.2 125 52.8
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.1e-27 127.5 194 40.7
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.4e-27 127.1 128 54.7
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.3e-25 119.8 94 62.8
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.0e-25 119.4 97 56.7
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 6.3e-23 111.7 191 40.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 6.3e-23 111.7 83 61.4
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.4e-22 109.8 95 53.7
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.7e-20 103.6 131 50.4
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 5.0e-20 102.1 188 37.2
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.9e-17 92.4 110 48.2
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.1e-17 92.0 66 66.7
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 4.3e-16 89.0 124 40.3
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 4.8e-15 85.5 100 53.0
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 5.0e-12 75.5 112 38.4
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 8.5e-12 74.7 174 32.2
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 3.0e-09 66.2 103 46.6
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.1e-08 64.3 133 29.3
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 1.5e-08 63.9 42 73.8
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.0e-08 63.5 98 41.8


User provided reference genes

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