Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G7150 Aethionema arabicum HOM05D010457 ORTHO05D002434 3.4e-52 208.0 100 100.0
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 1.1e-18 96.7 116 51.7
Carub.0003s2029 Capsella rubella HOM05D010457 ORTHO05D002434 2.4e-18 95.5 112 52.7
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 4.2e-18 94.7 116 47.4
BcaC05g28318 Brassica carinata HOM05D010457 ORTHO05D002434 6.0e-17 90.9 117 47.0
C05p44000 Brassica napus HOM05D010457 ORTHO05D002434 6.0e-17 90.9 117 47.0
BolC5t33118H Brassica oleracea HOM05D010457 ORTHO05D002434 6.0e-17 90.9 117 47.0
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 6.0e-17 90.9 106 50.9
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 3.3e-15 85.1 119 47.1
A05p28590 Brassica napus HOM05D010457 ORTHO05D002434 3.3e-15 85.1 117 44.4
BcaC01g03566 Brassica carinata HOM05D010457 ORTHO05D002434 6.2e-14 80.9 111 49.5
BolC3t17394H Brassica oleracea HOM05D010457 ORTHO05D002434 6.2e-14 80.9 111 49.5
C03p51080 Brassica napus HOM05D010457 ORTHO05D002434 1.1e-13 80.1 112 49.1
Sp3g18370 Schrenkiella parvula HOM05D010457 ORTHO05D002434 1.1e-13 80.1 121 44.6
BcaC09g48988 Brassica carinata HOM05D010457 ORTHO05D002434 1.4e-13 79.7 109 45.0
C01p43750 Brassica napus HOM05D010457 ORTHO05D002434 1.4e-13 79.7 109 45.0
BolC1t04334H Brassica oleracea HOM05D010457 ORTHO05D002434 1.4e-13 79.7 109 45.0
BcaB04g20658 Brassica carinata HOM05D010457 ORTHO05D002434 5.3e-13 77.8 115 44.3
BraA01t03531Z Brassica rapa HOM05D010457 ORTHO05D002434 1.2e-12 76.6 110 43.6
A01p34340 Brassica napus HOM05D010457 ORTHO05D002434 2.0e-12 75.9 112 42.9
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 8.4e-11 70.5 112 38.4
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 1.9e-10 69.3 125 38.4
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.5e-10 68.9 115 41.7
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 4.2e-10 68.2 109 38.5
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 4.2e-10 68.2 109 38.5
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.2e-10 68.2 120 38.3
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.5e-10 67.8 120 39.2
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.5e-10 67.8 120 39.2
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.2e-09 66.6 134 35.8
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 2.1e-09 65.9 124 34.7
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 2.1e-09 65.9 112 38.4
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.7e-09 65.5 117 36.8
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 4.6e-09 64.7 124 35.5
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 6.0e-09 64.3 121 37.2
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 6.0e-09 64.3 129 38.0
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.9e-09 63.9 122 35.2
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.3e-08 63.2 109 32.1
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.8e-08 62.8 123 36.6
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 1.8e-08 62.8 126 36.5
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.8e-08 62.8 117 38.5
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 2.3e-08 62.4 143 34.3
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 3.0e-08 62.0 117 36.8
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 3.0e-08 62.0 128 34.4
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 3.0e-08 62.0 126 34.9
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.9e-08 61.6 143 34.3
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.9e-08 61.6 143 34.3
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.9e-08 61.6 143 34.3
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 3.9e-08 61.6 110 34.5
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.1e-08 61.2 113 37.2
AT3G20340 Arabidopsis thaliana HOM05D010457 ORTHO05D002434 6.7e-08 60.8 128 36.7
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 6.7e-08 60.8 109 37.6
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 6.7e-08 60.8 124 35.5
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.1e-07 60.1 115 33.0
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 1.5e-07 59.7 106 39.6
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.5e-07 59.7 122 36.1
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.5e-07 59.7 123 34.1
AL3G34060 Arabidopsis lyrata HOM05D010457 ORTHO05D002434 1.9e-07 59.3 124 34.7
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.9e-07 59.3 143 32.9
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.9e-07 59.3 111 41.4
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.5e-07 58.9 130 33.8
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 4.3e-07 58.2 113 35.4
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.7e-07 57.8 131 35.1
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 7.4e-07 57.4 113 33.6
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 7.4e-07 57.4 121 35.5
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 9.6e-07 57.0 121 31.4
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 9.6e-07 57.0 109 34.9
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.3e-06 56.6 115 33.0
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.3e-06 56.6 127 33.1
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.6e-06 56.2 118 32.2
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.6e-06 56.2 118 32.2
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.6e-06 56.2 120 31.7
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.1e-06 55.8 115 30.4
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 2.1e-06 55.8 127 33.1
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 2.1e-06 55.8 115 36.5
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.8e-06 55.5 118 33.1
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 4.8e-06 54.7 111 36.9
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 4.8e-06 54.7 112 32.1
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 6.2e-06 54.3 122 32.8
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 6.2e-06 54.3 121 33.1
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 6.2e-06 54.3 118 34.7
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 8.2e-06 53.9 148 32.4
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 8.2e-06 53.9 110 36.4


User provided reference genes

Program Settings