Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 4.6e-252 874.0 424 100.0
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 5.4e-224 780.8 422 88.2
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 4.5e-223 777.7 422 87.7
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 1.0e-222 776.5 422 87.2
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 5.0e-222 774.2 422 87.7
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 6.5e-222 773.9 426 87.6
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 3.6e-220 768.1 427 85.9
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 2.3e-219 765.4 426 87.3
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 8.8e-219 763.5 424 85.4
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 3.4e-218 761.5 424 85.1
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 4.9e-217 757.7 424 85.1
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 2.0e-215 752.3 428 85.7
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 4.5e-215 751.1 428 85.5
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 1.0e-214 750.0 428 85.3
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 5.0e-214 747.7 426 85.4
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 4.3e-213 744.6 424 84.0
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 4.3e-213 744.6 424 84.0
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 2.3e-211 738.8 426 84.3
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.5e-202 709.5 424 80.2
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 5.2e-195 684.5 424 78.5
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 6.6e-190 667.5 415 75.9
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 9.5e-189 663.7 415 76.1
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 3.6e-188 661.8 414 76.6
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 3.1e-187 658.7 418 74.2
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 6.8e-187 657.5 415 75.2
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 2.6e-186 655.6 414 73.9
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 3.4e-186 655.2 415 74.5
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 9.9e-186 653.7 415 73.0
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.7e-185 652.9 415 73.7
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.7e-185 652.9 414 74.2
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 2.9e-185 652.1 413 74.3
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.9e-185 652.1 414 74.2
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 8.4e-185 650.6 414 73.9
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 1.4e-184 649.8 415 73.5
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 2.4e-184 649.0 415 73.3
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 9.2e-184 647.1 415 73.0
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 3.5e-183 645.2 419 70.9
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 4.6e-183 644.8 415 71.6
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 2.3e-182 642.5 413 73.6
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 1.5e-181 639.8 415 70.6
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 2.5e-181 639.0 415 72.8
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 2.5e-181 639.0 415 72.5
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 7.3e-181 637.5 416 70.2
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 9.6e-181 637.1 416 71.9
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.2e-180 636.7 415 71.1
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 1.6e-180 636.3 416 72.6
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 2.1e-180 636.0 415 72.3
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 8.1e-180 634.0 405 73.8
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 1.4e-179 633.3 430 70.5
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.4e-179 633.3 415 70.6
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 2.4e-179 632.5 415 70.8
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.2e-178 630.2 417 70.3
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 1.2e-178 630.2 419 71.6
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 1.5e-178 629.8 422 71.6
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 2.0e-178 629.4 413 72.6
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 2.9e-177 625.5 428 70.1
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 6.4e-177 624.4 410 70.5
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.1e-176 623.6 420 69.8
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 4.2e-176 621.7 425 70.4
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 7.1e-176 620.9 415 71.6
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.2e-175 620.2 419 69.0
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.1e-175 619.4 419 68.7
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 2.7e-175 619.0 429 68.5
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 3.5e-175 618.6 429 68.1
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 3.5e-175 618.6 419 70.2
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 2.3e-174 615.9 416 69.7
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 5.1e-174 614.8 414 71.0
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 5.1e-174 614.8 414 70.5
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 6.6e-174 614.4 419 70.6
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 6.6e-174 614.4 415 70.1
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 1.9e-173 612.8 420 71.7
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 7.3e-173 610.9 417 70.3
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 9.6e-173 610.5 429 67.1
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 1.4e-171 606.7 409 68.9
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 6.9e-171 604.4 417 69.5
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 6.9e-171 604.4 439 65.8
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 6.9e-171 604.4 419 69.0
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 9.0e-171 604.0 416 67.1
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 9.0e-171 604.0 409 68.0
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 4.9e-169 598.2 422 67.5
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 1.1e-168 597.0 420 67.6
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 2.7e-167 592.4 420 69.0
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 2.7e-167 592.4 422 65.9
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 7.9e-167 590.9 417 68.6
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.9e-165 586.3 415 68.4
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.9e-165 586.3 415 68.4
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.6e-164 583.2 407 65.8
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.6e-164 583.2 414 66.7
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 6.2e-164 581.3 414 66.9
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.8e-163 579.7 414 65.2
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.2e-162 577.0 415 63.6
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.0e-162 576.2 415 63.4
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.6e-162 575.9 424 67.7
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.7e-161 573.2 417 65.7
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 2.9e-161 572.4 414 66.9
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 2.9e-161 572.4 416 64.4
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.1e-160 570.5 417 66.7
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 1.9e-160 569.7 417 66.9
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 2.4e-160 569.3 398 67.1
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 4.2e-160 568.5 415 66.0
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 7.9e-159 564.3 414 65.2
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.1e-157 560.5 412 62.9
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.1e-157 560.5 432 61.6
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.8e-153 545.4 433 60.5
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 1.9e-152 543.1 414 63.5
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 2.5e-152 542.7 420 59.5
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 2.3e-150 536.2 415 64.1
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 5.1e-150 535.0 415 60.5
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 4.8e-148 528.5 416 60.8
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 3.1e-147 525.8 413 58.8
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.3e-145 520.4 414 57.2
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 8.5e-145 517.7 414 56.8
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 5.5e-144 515.0 420 59.8
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 9.4e-144 514.2 426 58.2
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 4.6e-143 511.9 357 70.0
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 4.1e-139 498.8 395 58.7
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.1e-139 498.8 447 53.5
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 2.2e-137 493.0 416 56.5
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 7.4e-125 451.4 406 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 3.1e-123 446.0 438 49.3
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 2.2e-121 439.9 310 69.4
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 4.1e-115 419.1 298 65.4
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 6.1e-111 405.2 413 48.2
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 3.0e-110 402.9 269 69.5
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 7.5e-109 398.3 414 45.7
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 4.1e-107 392.5 418 44.5
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 5.9e-106 388.7 427 48.7
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 7.7e-106 388.3 347 52.2
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.7e-105 387.1 427 49.4
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 4.0e-94 349.4 422 41.5
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 4.7e-87 325.9 239 64.4
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 3.1e-86 323.2 246 67.5
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 2.6e-85 320.1 227 68.3
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.5e-82 309.7 293 49.5
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.7e-57 227.6 146 78.1
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 5.3e-54 216.1 161 64.6
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 2.6e-53 213.8 158 65.8
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-51 208.0 158 68.4
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.3e-49 200.7 312 35.6
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 7.4e-48 195.7 139 61.2
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.1e-43 181.8 132 59.1
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 1.3e-39 168.3 114 65.8
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 2.9e-36 157.1 101 76.2
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.9e-36 156.4 224 42.0
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 2.5e-35 154.1 159 53.5
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.2e-34 151.8 127 64.6
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 1.3e-31 141.7 408 26.2
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 6.3e-31 139.4 92 75.0
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 2.4e-30 137.5 78 85.9
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 9.0e-30 135.6 79 82.3
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 1.5e-24 118.2 67 86.6
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 6.9e-22 109.4 71 70.4
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.4e-19 101.7 95 51.6
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 3.0e-17 94.0 60 75.0
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-16 92.0 73 64.4
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.5e-16 91.7 146 34.9
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 5.7e-16 89.7 85 50.6
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 2.0e-13 81.3 55 76.4
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-13 80.9 58 72.4
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 4.2e-11 73.6 62 56.5
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 1.6e-10 71.6 45 71.1
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 8.0e-10 69.3 51 68.6
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.4e-09 68.6 40 72.5
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 5.7e-08 63.2 106 34.9
C06p51380 Brassica napus HOM05D004203 ORTHO05D004830 2.4e-06 57.8 43 69.8
Cpa.g.c45316 Carica papaya HOM05D004203 ORTHO05D004830 2.4e-06 57.8 44 61.4
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 5.3e-06 56.6 71 36.6


User provided reference genes

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