Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 2.1e-126 455.7 228 100.0
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 3.6e-102 375.2 231 83.1
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 3.1e-101 372.1 231 82.3
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 7.4e-95 350.9 234 77.4
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 7.4e-95 350.9 234 77.4
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 1.1e-93 347.1 234 76.5
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 1.1e-93 347.1 234 76.5
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 2.4e-93 345.9 226 79.6
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 1.7e-91 339.7 228 78.1
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 2.2e-91 339.3 232 76.3
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 2.2e-91 339.3 230 78.3
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.2e-65 253.8 242 55.8
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.6e-65 253.4 242 55.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.0e-64 250.8 200 63.5
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 6.7e-64 248.1 196 61.7
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 9.7e-63 244.2 225 56.4
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 5.3e-61 238.4 202 60.9
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 2.6e-60 236.1 200 61.0
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 5.0e-59 231.9 194 60.3
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 1.1e-58 230.7 228 53.1
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 2.5e-58 229.6 210 55.7
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 3.2e-58 229.2 224 54.9
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 3.2e-58 229.2 202 56.9
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 5.5e-58 228.4 185 61.6
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 5.5e-58 228.4 182 62.6
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.0e-56 224.2 183 60.7
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 3.9e-56 222.2 182 61.0
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 6.7e-56 221.5 209 56.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 8.8e-56 221.1 222 52.3
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.5e-55 220.3 230 52.2
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.5e-55 220.3 222 52.7
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 2.0e-55 219.9 180 59.4
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 2.0e-55 219.9 185 58.9
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 2.6e-55 219.5 184 57.6
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 7.4e-55 218.0 225 54.2
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 9.7e-55 217.6 210 55.2
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 1.3e-54 217.2 184 57.1
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 8.2e-54 214.5 201 54.7
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 1.4e-53 213.8 182 58.2
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.8e-53 213.4 200 55.0
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 2.4e-53 213.0 188 56.9
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 1.6e-52 210.3 235 50.2
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.0e-51 207.6 212 52.4
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.3e-51 207.2 246 48.8
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 1.3e-51 207.2 199 53.8
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 3.8e-51 205.7 186 55.9
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 5.5e-50 201.8 231 49.8
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 5.5e-50 201.8 232 50.4
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 7.2e-50 201.4 154 62.3
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.1e-49 198.4 252 46.4
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.0e-48 197.6 184 54.3
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.8e-48 196.8 203 53.7
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 2.3e-48 196.4 177 53.7
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 3.0e-48 196.1 169 58.0
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 5.2e-48 195.3 200 52.0
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 8.3e-46 188.0 229 47.6
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.2e-44 184.1 224 47.3
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 5.5e-42 175.3 203 48.3
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.6e-41 173.7 186 49.5
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.3e-40 169.9 206 47.6
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 2.3e-40 169.9 134 58.2
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 1.7e-38 163.7 191 49.7
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.8e-38 162.9 182 48.4
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 6.3e-38 161.8 162 53.7
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 9.1e-37 157.9 201 44.8
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 3.5e-36 156.0 127 60.6
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 5.9e-36 155.2 161 48.4
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 1.3e-35 154.1 215 42.3
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.3e-35 153.3 137 57.7
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 5.0e-35 152.1 176 48.3
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 3.3e-34 149.4 256 43.4
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.2e-33 147.5 121 57.9
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 2.1e-33 146.7 130 56.2
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.8e-33 146.4 132 56.8
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 3.6e-33 146.0 108 61.1
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 3.6e-33 146.0 161 48.4
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 1.8e-32 143.7 144 50.0
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.5e-31 140.6 175 46.9
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 2.9e-30 136.3 166 48.2
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.4e-29 134.0 196 40.3
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 1.8e-29 133.7 109 63.3
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.0e-27 127.9 96 62.5
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.2e-25 120.9 140 47.9
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 2.2e-22 110.2 88 62.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 2.4e-21 106.7 154 42.2
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 9.2e-21 104.8 139 43.9
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 4.6e-20 102.4 86 58.1
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 6.0e-20 102.1 193 33.2
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 1.7e-19 100.5 65 69.2
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 3.0e-19 99.8 187 36.4
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 2.8e-17 93.2 121 44.6
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.4e-16 90.9 107 47.7
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.7e-12 76.6 182 28.6
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 1.5e-10 70.9 57 57.9
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 4.4e-07 59.3 78 41.0


User provided reference genes

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