Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G6240 Aethionema arabicum HOM05D004179 ORTHO05D005248 0.0e+00 1129.8 590 100.0
AL3G32890 Arabidopsis lyrata HOM05D004179 ORTHO05D005248 1.4e-275 952.6 592 85.5
BolC5t33281H Brassica oleracea HOM05D004179 ORTHO05D005248 4.2e-275 951.0 594 85.7
Carub.0003s1929 Capsella rubella HOM05D004179 ORTHO05D005248 9.3e-275 949.9 591 85.8
C05p45560 Brassica napus HOM05D004179 ORTHO05D005248 2.7e-274 948.3 594 85.4
CARHR094910 Cardamine hirsuta HOM05D004179 ORTHO05D005248 1.1e-272 943.0 594 84.7
Sp3g17540 Schrenkiella parvula HOM05D004179 ORTHO05D005248 1.9e-272 942.2 588 85.2
AT3G19490 Arabidopsis thaliana HOM05D004179 ORTHO05D005248 2.5e-272 941.8 593 84.5
A05p30130 Brassica napus HOM05D004179 ORTHO05D005248 5.6e-272 940.6 592 85.3
BraA05t21853Z Brassica rapa HOM05D004179 ORTHO05D005248 2.8e-271 938.3 592 85.1
Thhalv10020369m.g Eutrema salsugineum HOM05D004179 ORTHO05D005248 6.2e-271 937.2 593 84.3
BcaB06g26008 Brassica carinata HOM05D004179 ORTHO05D005248 5.3e-270 934.1 598 84.8
A03p41230 Brassica napus HOM05D004179 ORTHO05D005248 4.9e-268 927.5 592 84.0
BcaC01g03629 Brassica carinata HOM05D004179 ORTHO05D005248 1.4e-267 926.0 592 83.6
BolC3t17326H Brassica oleracea HOM05D004179 ORTHO05D005248 1.9e-267 925.6 593 83.6
BcaB04g19041 Brassica carinata HOM05D004179 ORTHO05D005248 4.2e-267 924.5 593 83.8
C03p50340 Brassica napus HOM05D004179 ORTHO05D005248 5.5e-267 924.1 592 83.4
BraA03t13276Z Brassica rapa HOM05D004179 ORTHO05D005248 4.6e-266 921.0 593 83.1
THA.LOC104812909 Tarenaya hassleriana HOM05D004179 ORTHO05D005248 1.1e-264 916.4 595 82.7
TWI79G0140 Tripterygium wilfordii HOM05D004179 ORTHO05D005248 1.0e-252 876.7 597 78.9
PGR042G2277 Punica granatum HOM05D004179 ORTHO05D005248 3.9e-249 864.8 608 76.8
FAN15G2578 Fragaria x ananassa HOM05D004179 ORTHO05D005248 1.9e-248 862.4 594 77.1
Cfa004570 Carpinus fangiana HOM05D004179 ORTHO05D005248 2.5e-248 862.1 598 77.6
FvH4_2g05320 Fragaria vesca HOM05D004179 ORTHO05D005248 2.5e-248 862.1 595 77.1
Prupe.8G134200 Prunus persica HOM05D004179 ORTHO05D005248 4.3e-248 861.3 597 78.2
Ciclev10028086m.g Citrus clementina HOM05D004179 ORTHO05D005248 3.7e-247 858.2 601 77.7
FAN20G2197 Fragaria x ananassa HOM05D004179 ORTHO05D005248 6.3e-247 857.4 594 76.8
Haze_10162 Corylus avellana HOM05D004179 ORTHO05D005248 8.2e-247 857.1 613 75.7
Hma1.2p1_0796F.1_g219140 Hydrangea macrophylla HOM05D004179 ORTHO05D005248 8.2e-247 857.1 555 82.0
Potri.009G096700 Populus trichocarpa HOM05D004179 ORTHO05D005248 4.1e-246 854.7 600 76.8
Lj5g0015320 Lotus japonicus HOM05D004179 ORTHO05D005248 2.6e-245 852.0 569 80.5
Ca_11083_v3 Cicer arietinum L. HOM05D004179 ORTHO05D005248 5.9e-245 850.9 594 77.4
CANSAT25G3047 Cannabis sativa HOM05D004179 ORTHO05D005248 7.7e-245 850.5 588 77.2
CANSAT25G1226 Cannabis sativa HOM05D004179 ORTHO05D005248 1.7e-244 849.4 588 77.2
Manes.07G069700 Manihot esculenta HOM05D004179 ORTHO05D005248 3.8e-244 848.2 594 76.9
Lj5A213T83 Lonicera japonica HOM05D004179 ORTHO05D005248 5.0e-244 847.8 546 81.9
Medtr1g107485 Medicago truncatula HOM05D004179 ORTHO05D005248 1.4e-243 846.3 598 77.4
AUR62039105 Chenopodium quinoa HOM05D004179 ORTHO05D005248 1.2e-242 843.2 556 79.3
Sabra09G0074300 Salix brachista HOM05D004179 ORTHO05D005248 2.1e-242 842.4 624 74.5
Potri.001G301000 Populus trichocarpa HOM05D004179 ORTHO05D005248 2.7e-242 842.0 599 76.3
Gohir.A03G186600 Gossypium hirsutum HOM05D004179 ORTHO05D005248 3.6e-242 841.6 592 76.4
Gohir.D02G207400 Gossypium hirsutum HOM05D004179 ORTHO05D005248 7.9e-242 840.5 592 75.8
AUR62010284 Chenopodium quinoa HOM05D004179 ORTHO05D005248 1.8e-241 839.3 544 80.7
Rhsim05G0087800 Rhododendron simsii HOM05D004179 ORTHO05D005248 1.8e-241 839.3 567 79.4
Gorai.005G235300 Gossypium raimondii HOM05D004179 ORTHO05D005248 2.3e-241 839.0 591 75.6
GSVIVG01003166001 Vitis vinifera HOM05D004179 ORTHO05D005248 3.0e-241 838.6 593 77.1
TAR628G1050 Trochodendron aralioides HOM05D004179 ORTHO05D005248 3.9e-241 838.2 597 75.9
Psat6g219600 Pisum sativum HOM05D004179 ORTHO05D005248 5.1e-241 837.8 597 76.4
RcHm_v2.0_Chr6g0255511 Rosa chinensis HOM05D004179 ORTHO05D005248 5.1e-241 837.8 597 75.0
Lalb_Chr06g0165491 Lupinus albus HOM05D004179 ORTHO05D005248 6.7e-241 837.4 603 75.0
Eucgr.G01360 Eucalyptus grandis HOM05D004179 ORTHO05D005248 8.8e-241 837.0 599 75.8
arahy.Tifrunner.gnm1.ann1.W9R5L5 Arachis hypogaea HOM05D004179 ORTHO05D005248 1.1e-240 836.6 592 77.0
arahy.Tifrunner.gnm1.ann1.T2YEM3 Arachis hypogaea HOM05D004179 ORTHO05D005248 1.5e-240 836.3 592 76.9
Nn5g30409 Nelumbo nucifera HOM05D004179 ORTHO05D005248 2.8e-239 832.0 599 76.1
ClCG05G010240 Citrullus lanatus HOM05D004179 ORTHO05D005248 8.2e-239 830.5 602 74.8
Peaxi162Scf00152g00232 Petunia axillaris HOM05D004179 ORTHO05D005248 1.1e-238 830.1 503 85.9
SGA_v2.0_scaffold225G43075 Striga asiatica HOM05D004179 ORTHO05D005248 1.1e-238 830.1 562 80.2
Oeu037243.1 Olea europaea HOM05D004179 ORTHO05D005248 3.1e-238 828.6 561 79.1
PGSC0003DMG400022932 Solanum tuberosum HOM05D004179 ORTHO05D005248 3.1e-238 828.6 555 78.7
CiPaw.05G010800 Carya illinoinensis HOM05D004179 ORTHO05D005248 5.3e-238 827.8 554 79.8
Sed0014414 Sechium edule HOM05D004179 ORTHO05D005248 5.3e-238 827.8 602 74.6
Thecc.02G107000 Theobroma cacao HOM05D004179 ORTHO05D005248 1.2e-237 826.6 573 77.5
Solyc11g044540.2 Solanum lycopersicum HOM05D004179 ORTHO05D005248 1.5e-237 826.2 555 78.6
TAR376G0033 Trochodendron aralioides HOM05D004179 ORTHO05D005248 2.0e-237 825.9 592 74.5
Sopen11g020160 Solanum pennellii HOM05D004179 ORTHO05D005248 2.6e-237 825.5 555 78.6
CAN.G621.5 Capsicum annuum HOM05D004179 ORTHO05D005248 4.5e-237 824.7 591 75.1
Migut.B00382 Erythranthe guttata HOM05D004179 ORTHO05D005248 4.5e-237 824.7 541 81.9
TPR.G13858 Trifolium pratense HOM05D004179 ORTHO05D005248 3.8e-236 821.6 606 74.4
QL11p033970 Quercus lobata HOM05D004179 ORTHO05D005248 8.5e-236 820.5 586 76.1
SalBow6G5260 Salvia bowleyana HOM05D004179 ORTHO05D005248 1.1e-235 820.1 511 83.2
MSTRG.20181 Avicennia marina HOM05D004179 ORTHO05D005248 2.5e-235 818.9 566 78.1
Oeu044290.1 Olea europaea HOM05D004179 ORTHO05D005248 5.5e-235 817.8 595 74.3
HanXRQChr16g0510101 Helianthus annuus HOM05D004179 ORTHO05D005248 1.6e-234 816.2 552 78.1
Lsat_1_v5_gn_7_86320 Lactuca sativa HOM05D004179 ORTHO05D005248 2.1e-234 815.8 544 79.4
COL.COLO4_32603 Corchorus olitorius HOM05D004179 ORTHO05D005248 2.3e-233 812.4 572 75.9
ECA236G2359 Erigeron canadensis HOM05D004179 ORTHO05D005248 3.0e-233 812.0 545 78.5
Atru.chr5.2582 Acer truncatum HOM05D004179 ORTHO05D005248 5.1e-233 811.2 599 74.3
Aqoxy6G02887 Aquilegia oxysepala HOM05D004179 ORTHO05D005248 5.1e-233 811.2 602 73.3
Cpa.g.sc106.85 Carica papaya HOM05D004179 ORTHO05D005248 6.7e-233 810.8 553 78.7
PSO541G5343 Papaver somniferum HOM05D004179 ORTHO05D005248 5.7e-232 807.7 599 73.5
EL10Ac9g22290 Beta vulgaris HOM05D004179 ORTHO05D005248 1.3e-231 806.6 621 71.0
DCAR_001640 Daucus carota HOM05D004179 ORTHO05D005248 3.7e-231 805.1 541 79.3
FAN24G2682 Fragaria x ananassa HOM05D004179 ORTHO05D005248 1.1e-230 803.5 629 70.9
unitig_37.g12803 Utricularia gibba HOM05D004179 ORTHO05D005248 2.4e-230 802.4 545 78.9
ATR0691G115 Amborella trichopoda HOM05D004179 ORTHO05D005248 3.1e-230 802.0 596 73.0
MSTRG.5346 Avicennia marina HOM05D004179 ORTHO05D005248 5.3e-230 801.2 539 79.4
VMungo0720G2067 Vigna mungo HOM05D004179 ORTHO05D005248 7.0e-230 800.8 588 73.5
Phvul.007G039000 Phaseolus vulgaris HOM05D004179 ORTHO05D005248 9.1e-230 800.4 543 78.1
HanXRQChr04g0128091 Helianthus annuus HOM05D004179 ORTHO05D005248 2.6e-229 798.9 521 80.4
PSO675G3501 Papaver somniferum HOM05D004179 ORTHO05D005248 2.6e-229 798.9 606 71.6
Hund06333 Selenicereus undatus HOM05D004179 ORTHO05D005248 5.9e-229 797.7 556 77.2
Ah.01g018160 Amaranthus hybridus HOM05D004179 ORTHO05D005248 8.5e-228 793.9 558 75.6
Cc02_g19190 Coffea canephora HOM05D004179 ORTHO05D005248 1.1e-227 793.5 546 79.5
Actinidia17883 Actinidia chinensis HOM05D004179 ORTHO05D005248 2.1e-226 789.3 542 79.3
vmacro19521 Vaccinium macrocarpon HOM05D004179 ORTHO05D005248 3.0e-225 785.4 539 78.7
Sc17g0003000 Simmondsia chinensis HOM05D004179 ORTHO05D005248 2.9e-220 768.8 557 75.6
RcHm_v2.0_Chr6g0255521 Rosa chinensis HOM05D004179 ORTHO05D005248 1.1e-219 766.9 511 78.9
HPP92_004767 Vanilla planifolia HOM05D004179 ORTHO05D005248 5.2e-217 758.1 599 68.9
Duzib052G0638 Durio zibethinus HOM05D004179 ORTHO05D005248 3.5e-213 745.3 508 78.3
RcHm_v2.0_Chr6g0255491 Rosa chinensis HOM05D004179 ORTHO05D005248 1.0e-212 743.8 473 81.8
Dinv15758 Davidia involucrata HOM05D004179 ORTHO05D005248 5.0e-212 741.5 445 87.4
SEGI_32792 Sequoiadendron giganteum HOM05D004179 ORTHO05D005248 2.6e-208 729.2 518 73.4
MELO3C019541.2 Cucumis melo HOM05D004179 ORTHO05D005248 5.4e-206 721.5 746 57.9
Duzib132G1089 Durio zibethinus HOM05D004179 ORTHO05D005248 2.7e-205 719.2 488 78.5
Zm00001eb307330 Zea mays HOM05D004179 ORTHO05D005248 4.5e-205 718.4 474 78.5
QL11p034034 Quercus lobata HOM05D004179 ORTHO05D005248 1.5e-203 713.4 448 83.5
Duzib052G0741 Durio zibethinus HOM05D004179 ORTHO05D005248 1.0e-201 707.2 592 66.9
QL11p034002 Quercus lobata HOM05D004179 ORTHO05D005248 1.2e-200 703.7 448 82.1
Hund00144 Selenicereus undatus HOM05D004179 ORTHO05D005248 4.9e-199 698.4 586 67.4
Rhsim05G0087900 Rhododendron simsii HOM05D004179 ORTHO05D005248 8.3e-199 697.6 447 83.7
Mapoly0030s0013 Marchantia polymorpha HOM05D004179 ORTHO05D005248 4.6e-197 691.8 528 69.1
AagrBONN_evm.TU.Sc2ySwM_117.488 Anthoceros agrestis HOM05D004179 ORTHO05D005248 1.5e-195 686.8 501 71.5
BcaC05g28472 Brassica carinata HOM05D004179 ORTHO05D005248 1.8e-193 679.9 594 66.3
Pp3c12_4070 Physcomitrium patens HOM05D004179 ORTHO05D005248 8.6e-188 661.0 502 68.3
Nitab4.5_0001596g0010 Nicotiana tabacum HOM05D004179 ORTHO05D005248 1.9e-187 659.8 407 85.7
Pp3c4_21490 Physcomitrium patens HOM05D004179 ORTHO05D005248 3.3e-187 659.1 524 66.0
Duzib132G1182 Durio zibethinus HOM05D004179 ORTHO05D005248 1.1e-182 644.0 408 82.1
Glyma.20G129500 Glycine max HOM05D004179 ORTHO05D005248 1.4e-182 643.7 450 76.4
Ciclev10030164m.g Citrus clementina HOM05D004179 ORTHO05D005248 3.4e-176 622.5 400 82.5
Thhalv10012248m.g Eutrema salsugineum HOM05D004179 ORTHO05D005248 4.4e-176 622.1 437 76.2
Os09g0109800 Oryza sativa ssp. japonica HOM05D004179 ORTHO05D005248 1.7e-175 620.2 421 77.4
AT1G49810 Arabidopsis thaliana HOM05D004179 ORTHO05D005248 3.2e-174 615.9 432 76.2
SMO347G0195 Selaginella moellendorffii HOM05D004179 ORTHO05D005248 1.6e-173 613.6 449 71.9
VMungo0720G0258 Vigna mungo HOM05D004179 ORTHO05D005248 5.1e-172 608.6 453 73.3
AL1G57290 Arabidopsis lyrata HOM05D004179 ORTHO05D005248 8.6e-172 607.8 436 74.1
CSS0041442 Camellia sinensis var. sinensis HOM05D004179 ORTHO05D005248 6.4e-167 591.7 463 72.8
MD05G1088200 Malus domestica HOM05D004179 ORTHO05D005248 5.1e-156 555.4 474 67.1
BcaB06g26006 Brassica carinata HOM05D004179 ORTHO05D005248 3.4e-152 542.7 327 88.1
CDE04G0108 Ceratophyllum demersum HOM05D004179 ORTHO05D005248 5.5e-150 535.4 543 59.3
vmacro23441 Vaccinium macrocarpon HOM05D004179 ORTHO05D005248 1.9e-142 510.4 454 66.1
CsaV3_3G018250 Cucumis sativus L. HOM05D004179 ORTHO05D005248 1.3e-138 497.7 402 69.9
Eucgr.H03221 Eucalyptus grandis HOM05D004179 ORTHO05D005248 5.7e-131 472.2 462 60.6
Carub.0001s3900 Capsella rubella HOM05D004179 ORTHO05D005248 2.0e-128 463.8 365 67.7
CiPaw.06G169900 Carya illinoinensis HOM05D004179 ORTHO05D005248 3.8e-127 459.5 310 78.4
MBI16_g34668_MAGBIO Magnolia biondii HOM05D004179 ORTHO05D005248 1.1e-126 458.0 269 87.0
Nitab4.5_0001539g0020 Nicotiana tabacum HOM05D004179 ORTHO05D005248 1.1e-126 458.0 260 90.0
RcHm_v2.0_Chr6g0255461 Rosa chinensis HOM05D004179 ORTHO05D005248 7.9e-117 425.2 275 79.6
Dinv42185 Davidia involucrata HOM05D004179 ORTHO05D005248 8.8e-116 421.8 316 75.3
Cre09.g395288 Chlamydomonas reinhardtii HOM05D004179 ORTHO05D005248 4.1e-113 412.9 502 47.2
Actinidia27968 Actinidia chinensis HOM05D004179 ORTHO05D005248 2.3e-87 327.4 484 46.3
Sabra16G0189200 Salix brachista HOM05D004179 ORTHO05D005248 1.1e-78 298.5 586 39.6
Glyma.10G261350 Glycine max HOM05D004179 ORTHO05D005248 1.2e-75 288.5 186 78.5
SEGI_35862 Sequoiadendron giganteum HOM05D004179 ORTHO05D005248 2.0e-72 277.7 224 65.2
Glyma.20G127600 Glycine max HOM05D004179 ORTHO05D005248 2.0e-67 261.2 195 71.3
CBR_g29563 Chara braunii HOM05D004179 ORTHO05D005248 1.3e-63 248.4 288 51.4
HanXRQChr02g0055551 Helianthus annuus HOM05D004179 ORTHO05D005248 1.6e-56 224.9 142 79.6
SEGI_39751 Sequoiadendron giganteum HOM05D004179 ORTHO05D005248 3.3e-54 217.2 189 60.8
RcHm_v2.0_Chr6g0255471 Rosa chinensis HOM05D004179 ORTHO05D005248 1.4e-49 201.8 119 86.6
TPR.G27121 Trifolium pratense HOM05D004179 ORTHO05D005248 1.7e-47 194.9 126 80.2
CBR_g39138 Chara braunii HOM05D004179 ORTHO05D005248 3.3e-46 190.7 203 52.2
Hund13342 Selenicereus undatus HOM05D004179 ORTHO05D005248 5.8e-35 153.3 109 71.6
SEGI_40595 Sequoiadendron giganteum HOM05D004179 ORTHO05D005248 8.4e-34 149.4 94 75.5
Hund09393 Selenicereus undatus HOM05D004179 ORTHO05D005248 4.2e-33 147.1 145 58.6
arahy.Tifrunner.gnm1.ann1.38ITRC Arachis hypogaea HOM05D000846 ORTHO05D021490 2.1e-32 144.8 109 76.1
HanXRQChr02g0055561 Helianthus annuus HOM05D004179 ORTHO05D021490 1.5e-27 128.6 78 87.2
Manes.04G059624 Manihot esculenta HOM05D004179 ORTHO05D021490 1.7e-26 125.2 69 92.8
PSO832G1539 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-23 115.5 104 58.7
TPR.G23074 Trifolium pratense HOM05D001509 ORTHO05D001361 3.9e-23 114.0 79 74.7
BcaB01g01792 Brassica carinata HOM05D002587 ORTHO05D002778 8.7e-23 112.8 86 73.3
CBR_g29562 Chara braunii HOM05D004179 ORTHO05D005248 1.1e-22 112.5 90 60.0
MD05G1088300 Malus domestica HOM05D004179 ORTHO05D005248 2.2e-21 108.2 70 78.6
arahy.Tifrunner.gnm1.ann1.38IWEY Arachis hypogaea HOM05D004179 ORTHO05D005248 2.0e-19 101.7 61 83.6
arahy.Tifrunner.gnm1.ann1.JR6IQW Arachis hypogaea HOM05D004179 ORTHO05D021490 1.8e-15 88.6 53 86.8
CARHR039870 Cardamine hirsuta HOM05D004179 ORTHO05D021490 3.7e-13 80.9 58 72.4
HanXRQChr04g0106691 Helianthus annuus HOM05D004179 ORTHO05D020814 2.5e-09 68.2 51 62.7
BcaC02g11330 Brassica carinata HOM05D004179 ORTHO05D092784 3.2e-09 67.8 133 34.6
Hund25982 Selenicereus undatus HOM05D004179 ORTHO05D021490 7.9e-08 63.2 39 82.1


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