Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 8.9e-69 263.5 132 100.0
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 3.2e-34 148.7 125 60.8
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.5e-26 122.5 127 52.8
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 1.2e-25 120.2 127 52.0
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 4.7e-25 118.2 133 50.4
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.8e-24 116.3 127 51.2
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 5.1e-24 114.8 127 50.4
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 5.1e-24 114.8 127 50.4
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.5e-23 113.2 133 48.1
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.5e-23 113.2 133 48.1
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.5e-23 113.2 133 48.1
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 1.5e-23 113.2 127 48.8
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 3.3e-23 112.1 131 48.1
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 3.3e-23 112.1 131 48.1
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.2e-20 103.6 124 45.2
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.6e-20 102.4 124 44.4
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 3.4e-20 102.1 124 46.0
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.7e-19 99.8 124 44.4
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 6.5e-19 97.8 124 43.5
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 8.5e-19 97.4 119 46.2
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 1.4e-18 96.7 124 42.7
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 1.9e-18 96.3 124 42.7
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.2e-18 95.5 124 42.7
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 3.2e-18 95.5 124 41.9
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 3.2e-18 95.5 126 41.3
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 3.2e-18 95.5 122 45.1
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 4.2e-18 95.1 121 43.8
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 5.5e-18 94.7 124 43.5
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 5.5e-18 94.7 124 42.7
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 5.5e-18 94.7 124 41.9
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 9.4e-18 94.0 124 43.5
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 1.6e-17 93.2 124 41.1
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 2.1e-17 92.8 117 43.6
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 2.7e-17 92.4 124 40.3
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 2.7e-17 92.4 124 41.1
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 2.7e-17 92.4 119 42.0
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 3.6e-17 92.0 124 41.9
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 4.7e-17 91.7 124 41.1
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 4.7e-17 91.7 124 41.9
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 6.1e-17 91.3 126 43.7
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 8.0e-17 90.9 126 40.5
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 8.0e-17 90.9 124 41.1
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 8.0e-17 90.9 121 40.5
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.0e-16 90.5 124 39.5
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.0e-16 90.5 124 39.5
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.0e-16 90.5 119 41.2
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.4e-16 90.1 119 42.9
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.4e-16 90.1 119 42.9
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.4e-16 90.1 119 42.9
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.8e-16 89.7 122 41.0
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 2.3e-16 89.4 122 41.8
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 2.3e-16 89.4 124 38.7
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.0e-16 89.0 119 42.0
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 3.0e-16 89.0 119 43.7
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.9e-16 88.6 119 42.0
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 5.2e-16 88.2 124 39.5
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 5.2e-16 88.2 119 41.2
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 5.2e-16 88.2 126 38.9
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 8.8e-16 87.4 124 40.3
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 8.8e-16 87.4 126 42.1
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 8.8e-16 87.4 126 42.1
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 8.8e-16 87.4 125 41.6
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 8.8e-16 87.4 124 39.5
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.5e-15 86.7 126 42.1
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 2.0e-15 86.3 121 41.3
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.0e-15 86.3 124 39.5
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 2.6e-15 85.9 124 38.7
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.6e-15 85.9 124 40.3
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 2.6e-15 85.9 121 38.8
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 2.6e-15 85.9 119 38.7
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.3e-15 85.5 124 38.7
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 4.4e-15 85.1 124 38.7
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 4.4e-15 85.1 124 38.7
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 4.4e-15 85.1 60 60.0
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 5.7e-15 84.7 101 42.6
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 5.7e-15 84.7 124 37.9
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 9.7e-15 84.0 60 56.7
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 9.7e-15 84.0 122 35.2
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.3e-14 83.6 124 40.3
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 1.3e-14 83.6 119 39.5
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 1.7e-14 83.2 121 38.8
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.7e-14 83.2 120 37.5
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 2.2e-14 82.8 124 37.1
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 2.2e-14 82.8 124 38.7
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 2.8e-14 82.4 124 38.7
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 3.7e-14 82.0 124 38.7
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 3.7e-14 82.0 60 58.3
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.8e-14 81.6 119 37.0
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 4.8e-14 81.6 124 37.9
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 4.8e-14 81.6 64 56.2
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 6.3e-14 81.3 64 54.7
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 8.2e-14 80.9 117 36.8
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 8.2e-14 80.9 119 36.1
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 8.2e-14 80.9 65 58.5
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.4e-13 80.1 117 35.9
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 1.4e-13 80.1 56 66.1
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.4e-13 80.1 122 38.5
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 1.8e-13 79.7 59 57.6
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 2.4e-13 79.3 123 39.8
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 2.4e-13 79.3 122 33.6
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 3.1e-13 79.0 59 57.6
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 3.1e-13 79.0 124 40.3
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 5.3e-13 78.2 59 59.3
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 1.6e-12 76.6 119 35.3
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.6e-12 76.6 124 38.7
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 4.5e-12 75.1 124 34.7
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 5.9e-12 74.7 59 55.9
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 5.9e-12 74.7 124 36.3
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 8.5e-11 70.9 59 55.9
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.5e-10 70.1 55 52.7
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 1.9e-10 69.7 53 52.8
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 1.9e-10 69.7 125 34.4
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 3.6e-09 65.5 64 45.3
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 6.1e-09 64.7 65 44.6
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 6.1e-09 64.7 59 49.2
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 8.8e-08 60.8 64 40.6
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 1.2e-07 60.5 54 46.3
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 6.3e-06 54.7 48 47.9


User provided reference genes

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