Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 2.6e-74 282.0 139 100.0
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 9.1e-56 220.3 134 80.6
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 2.0e-55 219.2 137 81.0
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 2.0e-55 219.2 134 79.9
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 3.5e-55 218.4 134 80.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 4.5e-55 218.0 134 79.1
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 4.5e-55 218.0 134 79.9
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 5.9e-55 217.6 134 79.1
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 5.9e-55 217.6 134 79.1
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 5.9e-55 217.6 134 79.1
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 7.7e-55 217.2 134 79.9
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.7e-54 216.1 137 79.6
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 6.6e-54 214.2 137 78.8
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.1e-53 213.4 137 78.1
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.5e-53 212.2 135 77.8
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 4.3e-53 211.5 138 77.5
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.2e-52 209.9 135 77.8
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 7.5e-50 200.7 139 70.5
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 4.9e-49 198.0 128 71.1
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 6.4e-49 197.6 135 75.6
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 4.1e-48 194.9 137 70.1
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 5.9e-47 191.0 136 65.4
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 7.8e-47 190.7 127 69.3
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.0e-46 190.3 130 70.0
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.3e-46 189.9 127 70.1
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 8.6e-46 187.2 136 66.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.1e-45 186.8 132 68.9
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.5e-45 186.4 131 67.2
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.9e-45 186.0 131 67.2
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 3.3e-45 185.3 127 68.5
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 4.3e-45 184.9 127 67.7
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 5.6e-45 184.5 127 67.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.2e-44 183.3 136 61.8
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.6e-44 183.0 130 66.9
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.6e-44 183.0 130 66.9
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 1.6e-44 183.0 130 66.9
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.1e-44 182.6 131 65.6
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 2.8e-44 182.2 136 61.8
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 4.7e-44 181.4 127 65.4
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 6.2e-44 181.0 127 66.1
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 6.2e-44 181.0 124 69.4
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 6.2e-44 181.0 126 64.3
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 2.3e-43 179.1 136 61.8
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 3.1e-43 178.7 132 65.2
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 5.2e-43 177.9 130 63.8
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 5.2e-43 177.9 131 65.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 5.2e-43 177.9 130 64.6
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 6.8e-43 177.6 126 66.7
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 8.9e-43 177.2 129 63.6
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.5e-42 176.4 130 64.6
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.0e-42 176.0 126 63.5
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 3.4e-42 175.3 119 66.4
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 5.8e-42 174.5 114 68.4
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 9.8e-42 173.7 118 66.9
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.3e-41 173.3 127 64.6
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.3e-41 173.3 126 65.1
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 1.3e-41 173.3 129 65.1
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-41 172.9 132 62.1
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-41 172.9 133 61.7
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.7e-41 172.9 134 61.2
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.7e-41 172.9 127 62.2
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.2e-41 172.6 127 62.2
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 2.2e-41 172.6 132 62.1
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 2.9e-41 172.2 129 64.3
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.9e-41 171.4 127 61.4
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 6.4e-41 171.0 132 62.1
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.4e-41 171.0 127 61.4
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 6.4e-41 171.0 118 66.1
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.4e-41 171.0 118 64.4
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 6.4e-41 171.0 102 72.5
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 6.4e-41 171.0 133 60.2
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 6.4e-41 171.0 121 66.9
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 8.3e-41 170.6 131 62.6
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 8.3e-41 170.6 102 71.6
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 8.3e-41 170.6 118 64.4
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 8.3e-41 170.6 102 71.6
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 1.1e-40 170.2 125 65.6
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 1.1e-40 170.2 125 65.6
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.4e-40 169.9 111 69.4
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.4e-40 169.9 132 63.6
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 3.2e-40 168.7 130 63.1
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.2e-40 168.7 126 61.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 5.4e-40 167.9 102 71.6
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 5.4e-40 167.9 100 73.0
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 7.0e-40 167.5 127 64.6
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 7.0e-40 167.5 118 66.9
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 7.0e-40 167.5 118 66.9
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 9.2e-40 167.2 108 68.5
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 9.2e-40 167.2 130 64.6
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.2e-39 166.8 109 69.7
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 1.6e-39 166.4 102 74.5
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 1.6e-39 166.4 130 61.5
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 2.0e-39 166.0 126 65.9
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.7e-39 165.6 118 62.7
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.7e-39 165.6 118 62.7
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 7.8e-39 164.1 106 70.8
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.7e-38 162.9 98 74.5
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 1.7e-38 162.9 122 59.0
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.3e-38 162.5 123 60.2
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 8.6e-38 160.6 106 68.9
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.9e-37 159.5 118 62.7
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 1.2e-36 156.8 126 60.3
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.6e-36 156.4 180 47.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.1e-36 156.0 112 63.4
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 1.1e-35 153.7 136 53.7
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.8e-34 147.1 87 77.0
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.3e-33 146.7 84 79.8
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 2.9e-33 145.6 115 64.3
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 1.4e-32 143.3 139 53.2
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.9e-32 142.9 172 45.9
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.9e-32 142.9 132 52.3
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 3.2e-32 142.1 111 62.2
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 7.1e-32 141.0 120 59.2
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 5.1e-30 134.8 100 60.0
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.5e-29 130.6 133 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.6e-28 129.8 104 53.8
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 8.1e-28 127.5 97 55.7
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.6e-26 122.5 84 63.1
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 4.9e-25 118.2 100 50.0
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 3.9e-22 108.6 97 47.4
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 2.5e-21 105.9 61 77.0
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 5.2e-19 98.2 98 44.9
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.5e-18 96.7 61 67.2
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 5.8e-18 94.7 61 67.2
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.2e-16 88.6 61 63.9
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 3.5e-15 85.5 85 45.9
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 4.6e-15 85.1 91 50.5
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.7e-14 83.2 67 58.2
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.1e-13 80.5 67 56.7
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.9e-13 79.7 42 83.3
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.3e-12 77.0 49 69.4
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.4e-11 73.6 42 76.2
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.1e-11 72.4 57 54.4
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 9.9e-10 67.4 34 85.3
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.3e-09 67.0 54 53.7
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 2.9e-09 65.9 101 30.7
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.4e-08 63.5 96 32.3
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 4.2e-08 62.0 42 61.9


User provided reference genes

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