Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 3.5e-74 281.6 145 100.0
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 8.7e-33 144.1 143 58.7
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 4.3e-32 141.7 143 57.3
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 7.4e-32 141.0 143 56.6
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.1e-30 137.1 143 55.2
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 4.9e-28 128.3 139 51.8
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 4.9e-28 128.3 139 51.8
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.4e-27 126.7 142 54.2
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.4e-27 125.9 141 54.6
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 2.7e-26 122.5 140 52.1
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 7.9e-26 120.9 141 50.4
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 7.9e-26 120.9 141 50.4
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 7.9e-26 120.9 141 50.4
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 5.1e-25 118.2 139 51.8
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.8e-23 112.5 143 50.3
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 2.3e-17 92.8 139 38.1
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 1.1e-16 90.5 138 39.9
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 1.6e-15 86.7 145 36.6
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 3.7e-15 85.5 137 37.2
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 6.3e-15 84.7 139 37.4
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.4e-14 83.6 139 36.7
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 1.8e-14 83.2 139 36.0
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 4.1e-14 82.0 138 35.5
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 5.3e-14 81.6 138 37.7
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 5.3e-14 81.6 139 36.7
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 6.9e-14 81.3 138 38.4
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 2.0e-13 79.7 138 37.0
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 2.6e-13 79.3 138 37.7
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 2.6e-13 79.3 138 37.7
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.6e-13 79.3 139 38.8
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 7.7e-13 77.8 136 36.0
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.0e-12 77.4 138 37.7
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 1.3e-12 77.0 137 35.0
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.9e-12 75.9 137 35.8
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 2.9e-12 75.9 138 37.0
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 6.5e-12 74.7 139 35.3
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 6.5e-12 74.7 148 34.5
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.5e-12 74.3 138 34.1
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.1e-11 73.9 137 33.6
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 9.4e-11 70.9 138 35.5
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.6e-10 70.1 139 34.5
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 2.7e-10 69.3 138 31.9
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 3.6e-10 68.9 137 35.0
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 3.6e-10 68.9 135 32.6
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 6.1e-10 68.2 137 32.1
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 1.0e-09 67.4 84 41.7
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.4e-09 67.0 138 35.5
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 1.4e-09 67.0 91 41.8
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 2.3e-09 66.2 131 35.9
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 2.3e-09 66.2 135 32.6
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 3.0e-09 65.9 88 39.8
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 3.9e-09 65.5 131 35.9
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 3.9e-09 65.5 135 34.8
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 5.1e-09 65.1 135 34.1
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.1e-08 63.9 135 34.1
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.5e-08 63.5 88 39.8
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 1.5e-08 63.5 139 30.2
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 1.5e-08 63.5 131 33.6
AL2G14840 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.5e-08 62.8 82 47.6
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 5.7e-08 61.6 139 28.8
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 7.4e-08 61.2 139 32.4
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 7.4e-08 61.2 138 29.7
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 9.7e-08 60.8 144 29.9
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 2.2e-07 59.7 137 29.2
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.4e-06 57.0 139 31.7
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 4.1e-06 55.5 130 31.5
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 5.3e-06 55.1 138 30.4


User provided reference genes

Program Settings