Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 3.5e-186 654.8 334 100.0
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.7e-124 449.9 333 75.1
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 1.4e-123 446.8 395 63.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.3e-119 433.7 386 63.2
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 5.3e-118 428.3 334 71.0
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 2.2e-116 422.9 366 65.3
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 2.7e-114 416.0 387 60.7
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.5e-107 392.9 385 59.7
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.6e-104 382.9 380 58.9
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 4.8e-103 378.6 386 58.0
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.1e-102 377.5 374 59.1
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 5.3e-102 375.2 391 56.5
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 5.3e-102 375.2 391 56.5
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 4.5e-85 318.9 358 51.4
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 2.3e-60 236.9 328 42.4
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 2.5e-59 233.4 326 44.8
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 2.5e-59 233.4 334 42.2
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.2e-58 231.1 331 41.4
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.6e-58 230.7 330 42.1
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 2.8e-58 229.9 324 41.4
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 2.8e-58 229.9 333 41.4
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 3.6e-58 229.6 329 41.6
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 4.0e-57 226.1 340 41.2
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.0e-57 226.1 334 41.0
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 6.8e-57 225.3 330 42.7
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 3.4e-56 223.0 340 41.8
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 5.8e-56 222.2 330 42.4
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 2.2e-55 220.3 314 43.3
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.1e-54 216.1 323 39.9
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 5.4e-54 215.7 342 40.1
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 7.1e-54 215.3 324 42.0
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.2e-53 214.5 323 39.6
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 3.5e-53 213.0 327 44.0
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.0e-52 211.5 308 44.2
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 3.9e-52 209.5 312 42.6
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 5.1e-52 209.1 371 38.0
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 1.5e-51 207.6 195 52.3
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 4.3e-51 206.1 324 40.7
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 9.6e-51 204.9 357 37.0
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.2e-50 204.5 350 36.9
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.2e-50 204.5 309 41.7
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.6e-50 204.1 346 39.0
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.6e-50 204.1 178 56.7
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 2.1e-50 203.8 373 37.8
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.8e-50 203.4 170 58.2
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 4.7e-50 202.6 170 57.6
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.7e-50 202.6 318 40.9
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 8.1e-50 201.8 315 40.6
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.1e-49 201.4 174 56.3
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.8e-49 200.7 355 38.9
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.4e-49 200.3 164 57.9
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 3.1e-49 199.9 309 41.1
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 3.1e-49 199.9 332 37.7
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 5.2e-49 199.1 307 41.7
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 5.2e-49 199.1 306 43.5
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 5.2e-49 199.1 372 35.2
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 8.9e-49 198.4 305 42.6
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 2.0e-48 197.2 299 42.1
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.0e-48 197.2 331 39.0
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 3.4e-48 196.4 194 47.4
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 4.4e-48 196.1 328 39.0
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 4.4e-48 196.1 302 42.4
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 5.8e-48 195.7 325 40.6
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 7.6e-48 195.3 310 38.7
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 9.9e-48 194.9 174 51.7
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 9.9e-48 194.9 307 40.1
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.3e-47 194.5 343 38.5
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 1.7e-47 194.1 216 49.5
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 4.9e-47 192.6 220 45.9
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.4e-47 192.2 323 39.3
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 8.4e-47 191.8 221 45.2
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 8.4e-47 191.8 176 53.4
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.4e-46 191.0 299 40.8
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 2.4e-46 190.3 181 51.9
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 5.4e-46 189.1 169 53.3
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 7.1e-46 188.7 418 33.0
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 1.6e-45 187.6 333 36.0
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 1.6e-45 187.6 334 37.7
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 3.5e-45 186.4 338 36.1
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 7.8e-45 185.3 171 53.2
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 1.7e-44 184.1 225 47.1
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.7e-44 184.1 179 51.4
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.1e-43 181.4 251 43.0
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 4.3e-43 179.5 330 36.4
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 3.6e-42 176.4 193 48.2
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 3.6e-42 176.4 241 39.0
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 8.1e-42 175.3 304 36.8
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.4e-41 174.5 350 35.1
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 5.3e-41 172.6 333 37.5
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 9.0e-41 171.8 182 45.6
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 2.0e-40 170.6 122 66.4
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 3.4e-40 169.9 199 42.7
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 4.5e-40 169.5 158 51.9
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 5.8e-40 169.1 192 41.7
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 9.9e-40 168.3 214 42.1
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 2.4e-38 163.7 361 32.7
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 9.6e-35 151.8 232 41.4
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 6.4e-31 139.0 177 39.5
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 1.2e-29 134.8 161 43.5
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 2.1e-29 134.0 138 51.4
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 2.5e-27 127.1 125 48.8
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 6.2e-26 122.5 167 39.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 5.3e-25 119.4 168 35.1
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.0e-23 115.2 240 36.7
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 1.4e-22 111.3 239 36.4
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 3.7e-18 96.7 95 45.3
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 5.9e-16 89.4 222 27.0
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.9e-11 74.3 117 32.5


User provided reference genes

Program Settings