Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G4370 Aethionema arabicum HOM05D000069 ORTHO05D038175 6.3e-60 233.8 109 100.0
Actinidia38070 Actinidia chinensis HOM05D000069 ORTHO05D000060 1.7e-09 66.2 103 38.8
Thhalv10007664m.g Eutrema salsugineum HOM05D000069 ORTHO05D013972 1.7e-09 66.2 71 42.3
Lalb_Chr11g0073601 Lupinus albus HOM05D000069 ORTHO05D000060 3.0e-09 65.5 76 40.8
Lalb_Chr11g0073621 Lupinus albus HOM05D000069 ORTHO05D000060 3.0e-09 65.5 76 42.1
AL5G21990 Arabidopsis lyrata HOM05D000069 ORTHO05D013972 3.9e-09 65.1 63 47.6
Lalb_Chr11g0073731 Lupinus albus HOM05D000069 ORTHO05D000060 5.0e-09 64.7 76 40.8
Actinidia20607 Actinidia chinensis HOM05D000069 ORTHO05D000060 6.6e-09 64.3 90 38.9
Carub.0005s0972 Capsella rubella HOM05D000069 ORTHO05D013972 8.6e-09 63.9 63 47.6
Actinidia38073 Actinidia chinensis HOM05D000069 ORTHO05D000060 1.9e-08 62.8 93 38.7
Nitab4.5_0001608g0070 Nicotiana tabacum HOM05D000069 ORTHO05D000060 3.3e-08 62.0 64 43.8
Lalb_Chr11g0073771 Lupinus albus HOM05D000069 ORTHO05D000060 4.3e-08 61.6 76 40.8
AT3G43960 Arabidopsis thaliana HOM05D000069 ORTHO05D013972 7.3e-08 60.8 63 44.4
Gorai.002G133800 Gossypium raimondii HOM05D000069 ORTHO05D000060 9.5e-08 60.5 93 37.6
Cfa000594 Carpinus fangiana HOM05D000069 ORTHO05D000060 1.6e-07 59.7 94 36.2
Nitab4.5_0000681g0130 Nicotiana tabacum HOM05D000069 ORTHO05D000060 1.6e-07 59.7 64 40.6
Lj6g0005682 Lotus japonicus HOM05D000069 ORTHO05D000060 2.1e-07 59.3 70 44.3
Peaxi162Scf00282g00713 Petunia axillaris HOM05D000069 ORTHO05D000060 2.1e-07 59.3 59 47.5
Peaxi162Scf01118g00004 Petunia axillaris HOM05D000069 ORTHO05D000060 2.1e-07 59.3 59 47.5
Thhalv10007931m.g Eutrema salsugineum HOM05D000069 ORTHO05D013972 2.8e-07 58.9 63 42.9
FAN21G0208 Fragaria x ananassa HOM05D000069 ORTHO05D035725 3.6e-07 58.5 69 42.0
Glyma.17G239000 Glycine max HOM05D000069 ORTHO05D000060 4.7e-07 58.2 95 35.8
DCAR_004011 Daucus carota HOM05D000069 ORTHO05D000060 6.2e-07 57.8 65 47.7
Gohir.D01G109300 Gossypium hirsutum HOM05D000069 ORTHO05D000060 6.2e-07 57.8 93 36.6
Oeu041792.1 Olea europaea HOM05D000069 ORTHO05D000060 6.2e-07 57.8 62 40.3
Aqoxy1G02083 Aquilegia oxysepala HOM05D000069 ORTHO05D000060 8.0e-07 57.4 84 41.7
arahy.Tifrunner.gnm1.ann1.A8GULN Arachis hypogaea HOM05D000069 ORTHO05D000060 8.0e-07 57.4 58 50.0
arahy.Tifrunner.gnm1.ann1.UNZM7G Arachis hypogaea HOM05D000069 ORTHO05D000060 8.0e-07 57.4 58 50.0
AUR62031186 Chenopodium quinoa HOM05D000069 ORTHO05D000060 8.0e-07 57.4 67 43.3
Gohir.A05G205200 Gossypium hirsutum HOM05D000069 ORTHO05D000060 8.0e-07 57.4 63 42.9
PGSC0003DMG400010223 Solanum tuberosum HOM05D000069 ORTHO05D000060 8.0e-07 57.4 55 50.9
Duzib041G0260 Durio zibethinus HOM05D000069 ORTHO05D000060 1.1e-06 57.0 76 36.8
FAN25G3149 Fragaria x ananassa HOM05D000069 ORTHO05D035725 1.1e-06 57.0 69 40.6
PGR102G1561 Punica granatum HOM05D000069 ORTHO05D000060 1.1e-06 57.0 61 44.3
unitig_748.g7785 Utricularia gibba HOM05D000069 ORTHO05D000060 1.1e-06 57.0 88 38.6
Ah.01g010730 Amaranthus hybridus HOM05D000069 ORTHO05D000060 1.4e-06 56.6 77 37.7
Gohir.D11G304400 Gossypium hirsutum HOM05D000069 ORTHO05D000060 1.4e-06 56.6 59 44.1
Gohir.D11G304800 Gossypium hirsutum HOM05D000069 ORTHO05D000060 1.4e-06 56.6 59 44.1
Gorai.007G329600 Gossypium raimondii HOM05D000069 ORTHO05D000060 1.4e-06 56.6 59 44.1
Nitab4.5_0001039g0010 Nicotiana tabacum HOM05D000069 ORTHO05D000060 1.4e-06 56.6 79 35.4
SGA_v2.0_scaffold28G11800 Striga asiatica HOM05D000069 ORTHO05D000060 1.4e-06 56.6 63 46.0
Ciclev10001718m.g Citrus clementina HOM05D000069 ORTHO05D000060 1.8e-06 56.2 58 46.6
Ciclev10001719m.g Citrus clementina HOM05D000069 ORTHO05D000060 1.8e-06 56.2 58 46.6
Ciclev10001723m.g Citrus clementina HOM05D000069 ORTHO05D000060 1.8e-06 56.2 58 46.6
Eucgr.E02741 Eucalyptus grandis HOM05D000069 ORTHO05D000060 1.8e-06 56.2 68 42.6
MD10G1281800 Malus domestica HOM05D000069 ORTHO05D000060 1.8e-06 56.2 59 45.8
QL04p051257 Quercus lobata HOM05D000069 ORTHO05D000060 1.8e-06 56.2 60 43.3
QL04p051314 Quercus lobata HOM05D000069 ORTHO05D000060 1.8e-06 56.2 60 43.3
QL04p051395 Quercus lobata HOM05D000069 ORTHO05D000060 1.8e-06 56.2 60 43.3
QL04p051498 Quercus lobata HOM05D000069 ORTHO05D000060 1.8e-06 56.2 60 43.3
EL10Ac1g01962 Beta vulgaris HOM05D000069 ORTHO05D000060 2.3e-06 55.8 75 40.0
Eucgr.E02714 Eucalyptus grandis HOM05D000069 ORTHO05D000060 2.3e-06 55.8 61 44.3
Thhalv10020714m.g Eutrema salsugineum HOM05D000069 ORTHO05D000060 2.3e-06 55.8 74 40.5
MD10G1281700 Malus domestica HOM05D000069 ORTHO05D000060 2.3e-06 55.8 59 45.8
TWI36G0865 Tripterygium wilfordii HOM05D000069 ORTHO05D000060 2.3e-06 55.8 78 37.2
CARHR094790 Cardamine hirsuta HOM05D000069 ORTHO05D000060 3.1e-06 55.5 67 38.8
AUR62013247 Chenopodium quinoa HOM05D000069 ORTHO05D000060 3.1e-06 55.5 63 39.7
HanXRQChr12g0356371 Helianthus annuus HOM05D000069 ORTHO05D038175 3.1e-06 55.5 74 36.5
QL04p051098 Quercus lobata HOM05D000069 ORTHO05D000060 3.1e-06 55.5 59 45.8
MD05G1302800 Malus domestica HOM05D000069 ORTHO05D000060 4.0e-06 55.1 59 45.8
Sopen02g021970 Solanum pennellii HOM05D000069 ORTHO05D000060 4.0e-06 55.1 55 50.9
arahy.Tifrunner.gnm1.ann1.J2EJNX Arachis hypogaea HOM05D000069 ORTHO05D000060 5.2e-06 54.7 59 47.5
arahy.Tifrunner.gnm1.ann1.ZZF2CC Arachis hypogaea HOM05D000069 ORTHO05D000060 5.2e-06 54.7 59 47.5
CSS0017285 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D000060 5.2e-06 54.7 105 32.4
CAN.G1194.18 Capsicum annuum HOM05D000069 ORTHO05D000060 5.2e-06 54.7 63 39.7
CAN.G1286.1 Capsicum annuum HOM05D000069 ORTHO05D000060 5.2e-06 54.7 59 44.1
Cfa000595 Carpinus fangiana HOM05D000069 ORTHO05D000060 5.2e-06 54.7 94 33.0
Duzib093G1377 Durio zibethinus HOM05D000069 ORTHO05D000060 5.2e-06 54.7 91 34.1
FAN04G1326 Fragaria x ananassa HOM05D000069 ORTHO05D000060 5.2e-06 54.7 87 34.5
Glyma.16G095900 Glycine max HOM05D000069 ORTHO05D000060 5.2e-06 54.7 63 38.1
Nn1g04445 Nelumbo nucifera HOM05D000069 ORTHO05D008115 5.2e-06 54.7 64 46.9
Oeu054787.1 Olea europaea HOM05D000069 ORTHO05D000060 5.2e-06 54.7 63 41.3
QL04p053303 Quercus lobata HOM05D000069 ORTHO05D000060 5.2e-06 54.7 59 44.1
Aa31LG8G6140 Aethionema arabicum HOM05D000069 ORTHO05D000060 6.8e-06 54.3 74 36.5
MSTRG.22246 Avicennia marina HOM05D000069 ORTHO05D000060 6.8e-06 54.3 63 44.4
CSS0010863 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D000060 6.8e-06 54.3 93 35.5
CARHR055660 Cardamine hirsuta HOM05D000069 ORTHO05D000060 6.8e-06 54.3 69 42.0
AUR62010266 Chenopodium quinoa HOM05D000069 ORTHO05D000060 6.8e-06 54.3 63 39.7
Glyma.14G085800 Glycine max HOM05D000069 ORTHO05D000060 6.8e-06 54.3 81 35.8
Gohir.A06G021200 Gossypium hirsutum HOM05D000069 ORTHO05D000060 6.8e-06 54.3 63 42.9
Gohir.D05G208500 Gossypium hirsutum HOM05D000069 ORTHO05D000060 6.8e-06 54.3 63 41.3
Gorai.009G214900 Gossypium raimondii HOM05D000069 ORTHO05D000060 6.8e-06 54.3 63 41.3
Lj6g0009794 Lotus japonicus HOM05D000069 ORTHO05D000060 6.8e-06 54.3 71 40.8
Sp3g17450 Schrenkiella parvula HOM05D000069 ORTHO05D000060 6.8e-06 54.3 74 39.2
Solyc02g093040.4 Solanum lycopersicum HOM05D000069 ORTHO05D000060 6.8e-06 54.3 60 41.7
MSTRG.24345 Avicennia marina HOM05D000069 ORTHO05D000060 8.9e-06 53.9 63 41.3
EL10Ac9g22311 Beta vulgaris HOM05D000069 ORTHO05D000060 8.9e-06 53.9 71 36.6
CARHR176070 Cardamine hirsuta HOM05D000069 ORTHO05D000060 8.9e-06 53.9 80 36.2
Ciclev10005334m.g Citrus clementina HOM05D000069 ORTHO05D000060 8.9e-06 53.9 58 44.8
Ciclev10005342m.g Citrus clementina HOM05D000069 ORTHO05D000060 8.9e-06 53.9 58 44.8
Ciclev10006884m.g Citrus clementina HOM05D000069 ORTHO05D000060 8.9e-06 53.9 58 44.8
COL.COLO4_32618 Corchorus olitorius HOM05D000069 ORTHO05D000060 8.9e-06 53.9 91 36.3
Duzib052G1054 Durio zibethinus HOM05D000069 ORTHO05D000060 8.9e-06 53.9 91 35.2
Gorai.010G022700 Gossypium raimondii HOM05D000069 ORTHO05D000060 8.9e-06 53.9 63 41.3
MBI07_g21401_MAGBIO Magnolia biondii HOM05D000069 ORTHO05D000060 8.9e-06 53.9 63 42.9
Manes.07G072200 Manihot esculenta HOM05D000069 ORTHO05D000060 8.9e-06 53.9 73 42.5
Medtr2g064475 Medicago truncatula HOM05D000069 ORTHO05D262177 8.9e-06 53.9 63 41.3
Potri.004G056100 Populus trichocarpa HOM05D000069 ORTHO05D000060 8.9e-06 53.9 95 31.6
Potri.004G056316 Populus trichocarpa HOM05D000069 ORTHO05D000060 8.9e-06 53.9 95 31.6
Sopen02g037610 Solanum pennellii HOM05D000069 ORTHO05D000060 8.9e-06 53.9 60 41.7


User provided reference genes

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