Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G4290 Aethionema arabicum HOM05D002688 ORTHO05D002911 1.5e-60 236.1 127 100.0
BcaC09g48692 Brassica carinata HOM05D002688 ORTHO05D002911 7.2e-15 84.3 56 73.2
BolC1t04660H Brassica oleracea HOM05D002688 ORTHO05D002911 7.2e-15 84.3 56 73.2
CARHR092690 Cardamine hirsuta HOM05D002688 ORTHO05D002911 7.2e-15 84.3 56 71.4
AL3G30430 Arabidopsis lyrata HOM05D002688 ORTHO05D002911 1.2e-14 83.6 56 71.4
BcaB04g20847 Brassica carinata HOM05D002688 ORTHO05D002911 1.2e-14 83.6 56 73.2
BcaB04g18938 Brassica carinata HOM05D002688 ORTHO05D002911 2.1e-14 82.8 57 73.7
BcaC01g03769 Brassica carinata HOM05D002688 ORTHO05D002911 2.1e-14 82.8 57 73.7
Sp3g15540 Schrenkiella parvula HOM05D002688 ORTHO05D002911 2.7e-14 82.4 54 74.1
AT3G17365 Arabidopsis thaliana HOM05D002688 ORTHO05D002911 6.1e-14 81.3 56 69.6
BolC3t17159H Brassica oleracea HOM05D002688 ORTHO05D002911 6.1e-14 81.3 57 71.9
Carub.0003s1708 Capsella rubella HOM05D002688 ORTHO05D002911 6.1e-14 81.3 54 74.1
A03p40150 Brassica napus HOM05D002688 ORTHO05D002911 2.3e-13 79.3 53 73.6
BraA03t13165Z Brassica rapa HOM05D002688 ORTHO05D002911 2.3e-13 79.3 53 73.6
Thhalv10021424m.g Eutrema salsugineum HOM05D002688 ORTHO05D002911 3.9e-13 78.6 56 69.6
C03p48770 Brassica napus HOM05D002688 ORTHO05D002911 8.8e-13 77.4 56 71.4
QL06p013820 Quercus lobata HOM05D002688 ORTHO05D002911 3.7e-11 72.0 52 59.6
CSS0024323 Camellia sinensis var. sinensis HOM05D002688 ORTHO05D002911 4.8e-11 71.6 58 58.6
C01p46880 Brassica napus HOM05D002688 ORTHO05D002911 8.2e-11 70.9 55 67.3
BraA01t03758Z Brassica rapa HOM05D002688 ORTHO05D002911 8.2e-11 70.9 51 70.6
A01p36980 Brassica napus HOM05D002688 ORTHO05D001194 1.1e-10 70.5 47 72.3
TAR633G0568 Trochodendron aralioides HOM05D002688 ORTHO05D002911 1.8e-10 69.7 52 59.6
Haze_00796 Corylus avellana HOM05D002688 ORTHO05D002911 4.1e-10 68.6 60 55.0
Manes.15G003900 Manihot esculenta HOM05D002688 ORTHO05D002911 4.1e-10 68.6 54 57.4
vmacro07998 Vaccinium macrocarpon HOM05D002688 ORTHO05D002911 4.1e-10 68.6 48 68.8
Aqoxy5G02770 Aquilegia oxysepala HOM05D002688 ORTHO05D002911 6.9e-10 67.8 52 57.7
THA.LOC104824724 Tarenaya hassleriana HOM05D002688 ORTHO05D002911 6.9e-10 67.8 47 66.0
CSS0017271 Camellia sinensis var. sinensis HOM05D002688 ORTHO05D002911 9.1e-10 67.4 53 60.4
Nn3g21877 Nelumbo nucifera HOM05D002688 ORTHO05D002911 9.1e-10 67.4 48 60.4
Ciclev10005764m.g Citrus clementina HOM05D002688 ORTHO05D002911 2.0e-09 66.2 52 61.5
CiPaw.01G131000 Carya illinoinensis HOM05D002688 ORTHO05D002911 2.6e-09 65.9 52 59.6
PSO170G2192 Papaver somniferum HOM05D002688 ORTHO05D002911 3.4e-09 65.5 58 50.0
PSO170G4185 Papaver somniferum HOM05D002688 ORTHO05D002911 3.4e-09 65.5 58 50.0
BolC3t17151H Brassica oleracea HOM05D002688 ORTHO05D002911 4.5e-09 65.1 45 68.9
RcHm_v2.0_Chr4g0426751 Rosa chinensis HOM05D002688 ORTHO05D002911 4.5e-09 65.1 52 55.8
Sc19g0002130 Simmondsia chinensis HOM05D002688 ORTHO05D002911 4.5e-09 65.1 43 62.8
Atru.chr4.3128 Acer truncatum HOM05D002688 ORTHO05D002911 1.0e-08 63.9 59 52.5
Potri.010G153200 Populus trichocarpa HOM05D002688 ORTHO05D002911 1.0e-08 63.9 58 56.9
Actinidia01055 Actinidia chinensis HOM05D002688 ORTHO05D002911 2.2e-08 62.8 47 61.7
TAR362G0783 Trochodendron aralioides HOM05D002688 ORTHO05D002911 3.8e-08 62.0 47 59.6
C03p48720 Brassica napus HOM05D002688 ORTHO05D002911 5.0e-08 61.6 45 66.7
Glyma.15G157700 Glycine max HOM05D002688 ORTHO05D002911 5.0e-08 61.6 47 57.4
Lj6g0010362 Lotus japonicus HOM05D002688 ORTHO05D002911 5.0e-08 61.6 53 52.8
GSVIVG01017672001 Vitis vinifera HOM05D002688 ORTHO05D002911 5.0e-08 61.6 50 54.0
FvH4_4g21180 Fragaria vesca HOM05D002688 ORTHO05D002911 6.5e-08 61.2 52 51.9
FAN07G1777 Fragaria x ananassa HOM05D002688 ORTHO05D002911 6.5e-08 61.2 52 51.9
FAN12G3805 Fragaria x ananassa HOM05D002688 ORTHO05D002911 6.5e-08 61.2 52 51.9
FAN17G2002 Fragaria x ananassa HOM05D002688 ORTHO05D002911 6.5e-08 61.2 52 51.9
Sed0020024 Sechium edule HOM05D002688 ORTHO05D002911 6.5e-08 61.2 54 48.1
Lalb_Chr15g0083771 Lupinus albus HOM05D002688 ORTHO05D002911 8.5e-08 60.8 48 54.2
Peaxi162Scf00126g01133 Petunia axillaris HOM05D002688 ORTHO05D002911 8.5e-08 60.8 48 58.3
Sabra10G0117800 Salix brachista HOM05D002688 ORTHO05D002911 8.5e-08 60.8 48 60.4
Ah.03g136450 Amaranthus hybridus HOM05D002688 ORTHO05D002911 1.1e-07 60.5 40 70.0
Phvul.009G242300 Phaseolus vulgaris HOM05D002688 ORTHO05D002911 1.1e-07 60.5 56 48.2
VMungo1309G1436 Vigna mungo HOM05D002688 ORTHO05D002911 1.1e-07 60.5 47 55.3
EL10Ac3g06268 Beta vulgaris HOM05D002688 ORTHO05D002911 1.9e-07 59.7 39 66.7
Medtr2g035820 Medicago truncatula HOM05D002688 ORTHO05D002911 1.9e-07 59.7 50 54.0
Prupe.1G108600 Prunus persica HOM05D002688 ORTHO05D002911 1.9e-07 59.7 39 66.7
MD13G1144200 Malus domestica HOM05D002688 ORTHO05D002911 2.5e-07 59.3 38 65.8
arahy.Tifrunner.gnm1.ann1.00A31M Arachis hypogaea HOM05D002688 ORTHO05D002911 3.2e-07 58.9 54 48.1
arahy.Tifrunner.gnm1.ann1.4SUD33 Arachis hypogaea HOM05D002688 ORTHO05D002911 3.2e-07 58.9 54 48.1
CsaV3_3G015470 Cucumis sativus L. HOM05D002688 ORTHO05D002911 3.2e-07 58.9 58 43.1
Rhsim04G0246900 Rhododendron simsii HOM05D000660 ORTHO05D000766 3.2e-07 58.9 47 59.6
Hund22622 Selenicereus undatus HOM05D002688 ORTHO05D002911 4.2e-07 58.5 39 64.1
Thecc.04G310300 Theobroma cacao HOM05D002688 ORTHO05D002911 4.2e-07 58.5 39 69.2
Cc03_g00270 Coffea canephora HOM05D002688 ORTHO05D002911 5.5e-07 58.2 48 54.2
Ca_01993_v3 Cicer arietinum L. HOM05D002770 ORTHO05D003011 7.2e-07 57.8 47 55.3
Lalb_Chr20g0114281 Lupinus albus HOM05D002688 ORTHO05D002911 7.2e-07 57.8 43 55.8
Sed0026277 Sechium edule HOM05D002688 ORTHO05D002911 7.2e-07 57.8 54 44.4
TPR.G31843 Trifolium pratense HOM05D002688 ORTHO05D002911 9.4e-07 57.4 50 52.0
ClCG05G006820 Citrullus lanatus HOM05D002688 ORTHO05D002911 1.2e-06 57.0 54 42.6
Lj6A699T65 Lonicera japonica HOM05D002688 ORTHO05D002911 1.2e-06 57.0 48 58.3
Eucgr.H04109 Eucalyptus grandis HOM05D002688 ORTHO05D002911 1.6e-06 56.6 34 70.6
Psat5g074720 Pisum sativum HOM05D002688 ORTHO05D002911 2.7e-06 55.8 50 52.0
HPP92_012777 Vanilla planifolia HOM05D002688 ORTHO05D002911 2.7e-06 55.8 51 47.1


User provided reference genes

Program Settings