Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.7e-65 252.7 144 100.0
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 3.5e-42 175.3 92 92.4
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 5.0e-41 171.4 92 90.2
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 5.0e-41 171.4 92 90.2
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 5.0e-41 171.4 92 90.2
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 5.0e-41 171.4 92 90.2
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 1.1e-40 170.2 92 89.1
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 1.5e-40 169.9 92 89.1
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 1.5e-40 169.9 92 89.1
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 1.5e-40 169.9 92 89.1
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 1.9e-40 169.5 92 89.1
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 1.9e-40 169.5 92 89.1
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 1.9e-40 169.5 92 89.1
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.9e-40 169.5 92 89.1
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 2.5e-40 169.1 92 89.1
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 2.5e-40 169.1 92 89.1
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 2.5e-40 169.1 110 79.1
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 2.5e-40 169.1 92 89.1
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 4.7e-39 164.9 92 84.8
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 2.3e-38 162.5 90 85.6
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 3.1e-38 162.2 92 85.9
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 3.1e-38 162.2 92 85.9
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 3.1e-38 162.2 92 82.6
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 3.1e-38 162.2 92 82.6
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 4.0e-38 161.8 92 82.6
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 4.0e-38 161.8 92 82.6
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 8.9e-38 160.6 89 82.0
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 2.6e-37 159.1 89 82.0
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 3.4e-37 158.7 92 80.4
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 3.4e-37 158.7 92 81.5
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 7.5e-37 157.5 92 79.3
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 9.9e-37 157.1 92 78.3
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 9.9e-37 157.1 92 79.3
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 9.9e-37 157.1 92 78.3
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 1.3e-36 156.8 92 80.4
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.3e-36 156.8 92 80.4
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.3e-36 156.8 92 80.4
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 1.3e-36 156.8 92 80.4
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 2.9e-36 155.6 89 78.7
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 4.9e-36 154.8 92 78.3
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 4.9e-36 154.8 92 78.3
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 6.4e-36 154.5 92 79.3
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 6.4e-36 154.5 92 76.1
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 6.4e-36 154.5 88 80.7
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 6.4e-36 154.5 89 82.0
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 8.3e-36 154.1 86 82.6
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 8.3e-36 154.1 92 78.3
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 1.1e-35 153.7 92 77.2
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 1.1e-35 153.7 92 77.2
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.4e-35 153.3 92 76.1
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.4e-35 153.3 92 77.2
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 1.4e-35 153.3 92 78.3
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 1.4e-35 153.3 95 73.7
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 1.4e-35 153.3 95 73.7
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 1.9e-35 152.9 88 78.4
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.9e-35 152.9 92 79.3
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 1.9e-35 152.9 92 75.0
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.9e-35 152.9 92 76.1
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 2.4e-35 152.5 93 73.1
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 3.2e-35 152.1 89 78.7
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 3.2e-35 152.1 89 76.4
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 4.1e-35 151.8 89 76.4
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 5.4e-35 151.4 92 76.1
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 5.4e-35 151.4 92 76.1
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 7.1e-35 151.0 91 75.8
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 7.1e-35 151.0 91 75.8
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 7.1e-35 151.0 92 76.1
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 9.2e-35 150.6 88 77.3
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 1.6e-34 149.8 92 75.0
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 2.1e-34 149.4 92 73.9
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 2.7e-34 149.1 88 77.3
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 3.5e-34 148.7 86 76.7
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 4.6e-34 148.3 92 73.9
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 4.6e-34 148.3 92 76.1
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 4.6e-34 148.3 89 74.2
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 4.6e-34 148.3 88 76.1
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 4.6e-34 148.3 89 74.2
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 6.0e-34 147.9 92 73.9
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 7.8e-34 147.5 113 66.4
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 1.3e-33 146.7 89 74.2
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 1.3e-33 146.7 87 77.0
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 1.7e-33 146.4 92 71.7
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 2.3e-33 146.0 88 75.0
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 6.6e-33 144.4 89 73.0
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 6.6e-33 144.4 91 71.4
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 1.1e-32 143.7 89 71.9
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 1.1e-32 143.7 89 71.9
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 1.1e-32 143.7 89 71.9
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 1.1e-32 143.7 88 73.9
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.9e-32 142.9 84 77.4
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 3.3e-32 142.1 89 71.9
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.6e-32 141.4 84 76.2
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 5.6e-32 141.4 89 70.8
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 9.5e-32 140.6 89 71.9
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 4.7e-31 138.3 86 72.1
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.1e-30 137.1 90 72.2
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.4e-30 136.7 135 53.3
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 7.6e-29 131.0 82 73.2
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 9.9e-29 130.6 92 64.1
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 9.9e-29 130.6 92 64.1
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.4e-27 124.8 120 54.2
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 1.6e-26 123.2 144 48.6
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 2.1e-26 122.9 119 52.1
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 6.6e-25 117.9 96 65.6
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 6.6e-25 117.9 92 63.0
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 6.6e-25 117.9 66 80.3
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 1.5e-24 116.7 84 64.3
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 2.1e-23 112.8 66 75.8
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 2.1e-23 112.8 66 77.3
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.8e-22 109.8 89 61.8
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 3.1e-22 109.0 118 52.5
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 2.6e-21 105.9 65 73.8
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 3.2e-19 99.0 95 56.8
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 4.6e-18 95.1 63 66.7
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 2.3e-17 92.8 57 71.9
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 3.9e-17 92.0 94 54.3
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 8.7e-17 90.9 89 52.8
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 7.3e-16 87.8 72 66.7
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 7.3e-16 87.8 72 68.1
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 4.0e-14 82.0 83 44.6
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 5.8e-13 78.2 71 46.5
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 9.9e-13 77.4 83 41.0
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 3.8e-12 75.5 107 43.0
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 1.4e-11 73.6 66 57.6
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 9.3e-11 70.9 56 58.9
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 1.6e-07 60.1 67 41.8
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 2.8e-07 59.3 71 36.6
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.4e-06 57.0 43 65.1
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.4e-06 57.0 62 38.7


User provided reference genes

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