Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 3.7e-131 471.5 227 100.0
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 2.0e-108 396.0 221 85.1
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 2.6e-108 395.6 224 84.4
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 7.6e-108 394.0 225 84.4
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 4.1e-106 388.3 221 83.3
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 5.4e-106 387.9 221 83.3
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.2e-105 386.7 221 83.7
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 2.7e-105 385.6 225 81.3
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 2.7e-105 385.6 225 81.3
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 2.7e-105 385.6 225 81.3
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.0e-104 383.6 225 80.9
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 3.3e-103 378.6 219 83.1
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 9.6e-103 377.1 217 82.5
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 3.9e-96 355.1 225 76.9
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 4.5e-84 315.1 222 65.8
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 3.8e-83 312.0 220 62.7
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.4e-82 310.1 222 65.8
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.4e-82 310.1 220 64.5
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.4e-82 310.1 220 65.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.9e-82 309.7 217 63.1
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 4.2e-82 308.5 220 65.0
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 4.2e-82 308.5 217 64.1
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 5.4e-82 308.1 216 64.8
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 7.1e-82 307.8 220 62.7
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 6.0e-81 304.7 217 62.7
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.3e-80 303.5 223 63.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.3e-80 303.5 213 63.4
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 3.0e-80 302.4 214 65.0
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.9e-80 302.0 219 63.9
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 3.9e-80 302.0 223 62.8
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 6.7e-80 301.2 214 63.1
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.1e-79 300.4 212 65.6
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.1e-79 300.4 222 61.7
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.5e-79 300.1 223 61.9
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.3e-79 298.9 217 61.3
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 4.3e-79 298.5 214 62.6
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 9.6e-79 297.4 221 60.6
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 9.6e-79 297.4 222 62.6
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 1.6e-78 296.6 219 60.7
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.6e-78 296.6 217 61.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.6e-78 296.6 223 60.5
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 2.8e-78 295.8 220 61.8
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 8.1e-78 294.3 220 60.5
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.1e-77 293.9 217 59.9
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.4e-77 293.5 215 59.5
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.8e-77 293.1 217 61.3
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.8e-77 293.1 218 61.0
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 4.0e-77 292.0 215 62.3
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 4.0e-77 292.0 219 59.4
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 5.3e-77 291.6 222 59.9
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 5.3e-77 291.6 218 60.6
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 5.3e-77 291.6 223 58.7
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 9.0e-77 290.8 219 58.4
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.6e-76 289.3 220 62.7
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 2.6e-76 289.3 215 59.5
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.6e-76 289.3 209 59.3
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 3.4e-76 288.9 216 60.6
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 4.5e-76 288.5 216 60.2
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 4.5e-76 288.5 220 58.6
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 4.5e-76 288.5 225 61.3
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 5.8e-76 288.1 230 61.3
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 7.6e-76 287.7 224 61.6
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.0e-75 287.3 218 59.2
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.0e-75 287.3 217 60.4
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.0e-75 287.3 222 57.7
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.7e-75 286.6 217 58.5
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.7e-75 286.6 222 57.7
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 2.9e-75 285.8 216 59.7
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.9e-75 285.8 217 61.3
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.8e-75 285.4 216 58.8
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.9e-75 285.0 215 59.1
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.9e-74 283.1 215 59.5
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 4.2e-74 282.0 183 69.9
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 5.5e-74 281.6 202 62.4
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 7.1e-74 281.2 226 57.5
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.2e-73 280.4 174 73.6
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 2.7e-73 279.3 211 60.2
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 4.6e-73 278.5 213 58.2
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 6.0e-73 278.1 225 57.3
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.0e-72 277.3 216 57.4
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.8e-72 276.6 216 57.4
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 5.1e-72 275.0 213 59.2
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 6.7e-72 274.6 275 46.5
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.9e-71 273.1 208 56.7
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 5.7e-71 271.6 211 58.3
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 2.8e-70 269.2 218 54.1
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.1e-69 267.3 211 57.8
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 3.1e-69 265.8 220 52.7
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 2.0e-68 263.1 201 67.7
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 1.4e-66 256.9 211 56.9
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 5.5e-66 255.0 218 53.7
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.1e-65 253.1 211 55.9
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 3.5e-65 252.3 197 57.9
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 7.9e-65 251.1 209 56.0
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.8e-64 250.0 209 56.0
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.6e-62 243.4 216 51.4
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 3.7e-62 242.3 174 61.5
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.4e-61 240.4 173 63.0
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.5e-60 236.9 250 46.8
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 2.2e-59 233.0 213 53.1
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 6.5e-59 231.5 172 62.2
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 3.2e-58 229.2 217 49.8
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.7e-57 226.1 180 58.3
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.1e-55 220.7 221 47.1
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 4.1e-53 212.2 212 47.2
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 5.3e-53 211.8 222 41.9
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.2e-51 206.5 216 46.3
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.1e-49 199.9 152 59.9
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 7.9e-49 198.0 155 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.0e-48 197.6 205 46.8
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.4e-48 197.2 214 46.7
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 3.9e-48 195.7 213 41.8
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 4.4e-47 192.2 208 41.3
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.1e-45 187.6 159 53.5
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 5.2e-40 168.7 136 55.9
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.2e-38 163.3 164 48.2
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.6e-36 157.1 113 62.8
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 2.2e-30 136.7 217 32.3
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 5.9e-28 128.6 82 69.5
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.0e-23 113.6 112 50.0
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 1.8e-21 107.1 158 43.0
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 8.6e-19 98.2 98 46.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 1.2e-17 94.4 221 26.7
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 8.3e-14 81.6 54 64.8
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 7.8e-12 75.1 116 31.0
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 3.0e-11 73.2 97 41.2
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 7.3e-10 68.6 43 65.1
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 3.4e-07 59.7 43 58.1


User provided reference genes

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