Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G400 Aethionema arabicum HOM05D012956 ORTHO05D014768 4.9e-158 561.2 312 100.0
CARHR087780 Cardamine hirsuta HOM05D012956 ORTHO05D014768 2.3e-83 313.2 326 62.3
Sp3g11370 Schrenkiella parvula HOM05D012956 ORTHO05D014768 7.0e-80 301.6 325 63.1
AT3G13190 Arabidopsis thaliana HOM05D012956 ORTHO05D014768 8.6e-78 294.7 326 60.7
AL3G24940 Arabidopsis lyrata HOM05D012956 ORTHO05D014768 9.5e-77 291.2 324 60.2
Carub.0003s1255 Capsella rubella HOM05D012956 ORTHO05D014768 2.0e-74 283.5 317 60.9
Thhalv10020999m.g Eutrema salsugineum HOM05D012956 ORTHO05D014768 1.2e-52 211.1 366 46.2
BcaB06g25480 Brassica carinata HOM05D012956 ORTHO05D014768 1.1e-48 198.0 342 46.5
A05p36380 Brassica napus HOM05D012956 ORTHO05D014768 2.4e-43 180.3 351 45.9
BraA05t22438Z Brassica rapa HOM05D012956 ORTHO05D014768 3.4e-42 176.4 354 43.5
BcaC05g29204 Brassica carinata HOM05D012956 ORTHO05D014768 2.9e-41 173.3 353 44.5
C05p54760 Brassica napus HOM05D012956 ORTHO05D014768 2.9e-41 173.3 353 44.5
BolC5t34150H Brassica oleracea HOM05D012956 ORTHO05D014768 7.1e-40 168.7 359 43.7
THA.LOC104815691 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 1.6e-23 114.4 424 31.6
THA.LOC104810293 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 1.0e-22 111.7 400 32.0
QL05p067335 Quercus lobata HOM05D001827 ORTHO05D001790 7.4e-13 79.0 298 29.9
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.1e-11 73.6 349 29.5
Haze_07028 Corylus avellana HOM05D001827 ORTHO05D001790 5.3e-11 72.8 267 30.3
Oeu057017.1 Olea europaea HOM05D001827 ORTHO05D008650 5.3e-11 72.8 368 25.3
Medtr3g007920 Medicago truncatula HOM05D001827 ORTHO05D001790 2.6e-10 70.5 353 29.2
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 5.9e-10 69.3 379 28.2
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 1.7e-09 67.8 340 27.4
Actinidia04995 Actinidia chinensis HOM05D001827 ORTHO05D001790 3.8e-09 66.6 167 35.9
MELO3C014113.2 Cucumis melo HOM05D001827 ORTHO05D001790 8.5e-09 65.5 362 27.6
CsaV3_3G004170 Cucumis sativus L. HOM05D001827 ORTHO05D001790 8.5e-09 65.5 362 27.9
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 1.4e-08 64.7 346 29.5
GSVIVG01014707001 Vitis vinifera HOM05D001827 ORTHO05D001790 1.9e-08 64.3 399 27.1
TPR.G8584 Trifolium pratense HOM05D001827 ORTHO05D001790 3.2e-08 63.5 363 28.1
Atru.chr1.2237 Acer truncatum HOM05D001827 ORTHO05D001790 4.2e-08 63.2 258 29.5
CAN.G623.22 Capsicum annuum HOM05D001827 ORTHO05D001790 4.2e-08 63.2 160 35.6
Peaxi162Scf00139g01120 Petunia axillaris HOM05D001827 ORTHO05D001790 7.2e-08 62.4 108 42.6
TWI77G0847 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 7.2e-08 62.4 301 27.6
Aa31LG3G11780 Aethionema arabicum HOM05D001827 ORTHO05D001790 1.2e-07 61.6 358 27.1
Sabra16G0010100 Salix brachista HOM05D001827 ORTHO05D001790 1.6e-07 61.2 285 29.8
HanXRQChr03g0080331 Helianthus annuus HOM05D001827 ORTHO05D001790 2.7e-07 60.5 288 28.5
Sopen07g033890 Solanum pennellii HOM05D001827 ORTHO05D001790 2.7e-07 60.5 108 44.4
Sc05g0009880 Simmondsia chinensis HOM05D001827 ORTHO05D001790 3.6e-07 60.1 283 27.2
Sp6g17740 Schrenkiella parvula HOM05D001827 ORTHO05D001790 6.1e-07 59.3 196 33.2
CSS0027094 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 7.9e-07 58.9 148 36.5
CSS0010892 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 1.0e-06 58.5 142 38.0
QL05p066984 Quercus lobata HOM05D001827 ORTHO05D001790 1.0e-06 58.5 298 27.5
Ciclev10014746m.g Citrus clementina HOM05D001827 ORTHO05D001790 1.3e-06 58.2 279 28.3
PGSC0003DMG400022271 Solanum tuberosum HOM05D001827 ORTHO05D001790 1.3e-06 58.2 108 41.7
FvH4_3g42741 Fragaria vesca HOM05D001827 ORTHO05D001790 1.8e-06 57.8 158 34.2
Hund23030 Selenicereus undatus HOM05D001827 ORTHO05D001790 1.8e-06 57.8 171 32.7
Solyc07g065680.3 Solanum lycopersicum HOM05D001827 ORTHO05D001790 3.0e-06 57.0 107 41.1
CANSAT56G2984 Cannabis sativa HOM05D001827 ORTHO05D001790 3.9e-06 56.6 288 27.1
MSTRG.14494 Avicennia marina HOM05D001827 ORTHO05D001790 5.1e-06 56.2 299 28.8
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 5.1e-06 56.2 325 26.5
Nn1g07767 Nelumbo nucifera HOM05D001827 ORTHO05D001790 6.7e-06 55.8 91 40.7
RcHm_v2.0_Chr5g0076481 Rosa chinensis HOM05D001827 ORTHO05D001790 6.7e-06 55.8 158 34.2
Thhalv10012934m.g Eutrema salsugineum HOM05D001827 ORTHO05D001790 8.7e-06 55.5 322 27.6


User provided reference genes

Program Settings