Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 3.6e-76 288.5 185 100.0
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 7.9e-31 137.9 181 48.6
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 1.8e-30 136.7 183 53.6
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 6.7e-30 134.8 116 60.3
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 1.5e-29 133.7 182 45.6
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.7e-28 130.2 176 49.4
Thhalv10021613m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 2.8e-28 129.4 180 60.6
AL3G29590 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 8.2e-28 127.9 176 43.8
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.1e-27 127.5 176 43.8
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 1.4e-27 127.1 120 61.7
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 2.4e-27 126.3 178 43.8
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 3.1e-27 125.9 171 43.9
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 3.1e-27 125.9 118 55.9
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 3.1e-27 125.9 116 56.9
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 5.3e-27 125.2 118 59.3
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 2.0e-26 123.2 114 58.8
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 2.6e-26 122.9 175 56.6
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 4.5e-26 122.1 162 53.7
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 5.9e-26 121.7 116 55.2
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 5.9e-26 121.7 123 56.9
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 7.7e-26 121.3 116 54.3
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 1.0e-25 120.9 114 55.3
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 1.0e-25 120.9 116 54.3
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 1.0e-25 120.9 116 54.3
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 1.7e-25 120.2 114 53.5
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 2.9e-25 119.4 117 58.1
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 3.8e-25 119.0 120 56.7
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 3.8e-25 119.0 116 53.4
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 3.8e-25 119.0 177 44.1
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 5.0e-25 118.6 116 54.3
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 5.0e-25 118.6 117 57.3
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 5.0e-25 118.6 117 57.3
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 6.5e-25 118.2 118 54.2
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 8.5e-25 117.9 172 41.9
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 8.5e-25 117.9 116 51.7
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 1.1e-24 117.5 173 45.1
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 3.2e-24 115.9 174 42.5
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 4.2e-24 115.5 118 52.5
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 5.5e-24 115.2 183 42.1
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 5.5e-24 115.2 120 54.2
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 7.2e-24 114.8 174 42.0
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 9.4e-24 114.4 117 55.6
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 9.4e-24 114.4 117 54.7
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.6e-23 113.6 117 54.7
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 1.6e-23 113.6 116 51.7
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 1.6e-23 113.6 119 52.1
CARHR091930 Cardamine hirsuta HOM05D003565 ORTHO05D003943 3.6e-23 112.5 175 42.3
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 3.6e-23 112.5 114 50.9
CARHR150160 Cardamine hirsuta HOM05D003565 ORTHO05D003943 4.7e-23 112.1 175 42.3
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 4.7e-23 112.1 115 52.2
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 1.0e-22 110.9 119 55.5
Carub.0002s1293 Capsella rubella HOM05D003565 ORTHO05D003943 1.4e-22 110.5 177 42.4
Carub.0003s1640 Capsella rubella HOM05D003565 ORTHO05D003943 1.4e-22 110.5 177 42.4
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 4.0e-22 109.0 177 41.2
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 5.2e-22 108.6 175 40.6
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 8.8e-22 107.8 115 54.8
Sp3g14950 Schrenkiella parvula HOM05D003565 ORTHO05D003943 8.8e-22 107.8 190 53.7
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 1.2e-21 107.5 178 38.2
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.2e-21 107.5 174 39.7
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 1.5e-21 107.1 179 40.2
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 2.0e-21 106.7 162 42.0
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 3.3e-21 105.9 114 53.5
BraA01t03825Z Brassica rapa HOM05D003565 ORTHO05D003943 7.5e-21 104.8 179 53.1
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 7.5e-21 104.8 114 50.0
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 7.5e-21 104.8 114 50.0
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 1.3e-20 104.0 126 49.2
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 1.7e-20 103.6 117 45.3
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 1.7e-20 103.6 117 45.3
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 1.7e-20 103.6 176 40.3
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.7e-20 102.4 121 48.8
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.7e-20 102.4 121 48.8
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 3.7e-20 102.4 119 51.3
C01p47670 Brassica napus HOM05D003565 ORTHO05D003943 4.8e-20 102.1 178 48.9
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 6.3e-20 101.7 109 52.3
BolC1t04739H Brassica oleracea HOM05D003565 ORTHO05D003943 4.1e-19 99.0 192 50.0
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 9.1e-19 97.8 117 52.1
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 9.1e-19 97.8 120 49.2
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.2e-18 97.4 118 47.5
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 1.2e-18 97.4 117 45.3
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 2.7e-18 96.3 120 50.8
A01p37210 Brassica napus HOM05D003565 ORTHO05D003943 4.5e-18 95.5 179 43.0
A01p37640 Brassica napus HOM05D003565 ORTHO05D003943 5.9e-18 95.1 194 49.0
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 7.7e-18 94.7 116 44.0
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.0e-17 94.4 124 46.0
MELO3C035189.2 Cucumis melo HOM05D003565 ORTHO05D003943 2.2e-17 93.2 119 45.4
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 2.9e-17 92.8 119 46.2
BcaB04g18928 Brassica carinata HOM05D003565 ORTHO05D003943 5.0e-17 92.0 180 36.1
A01p37230 Brassica napus HOM05D003565 ORTHO05D003943 8.5e-17 91.3 179 41.3
A03p40060 Brassica napus HOM05D003565 ORTHO05D003943 8.5e-17 91.3 180 36.1
BraA03t13156Z Brassica rapa HOM05D003565 ORTHO05D003943 8.5e-17 91.3 180 36.1
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 8.5e-17 91.3 116 44.8
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.1e-16 90.9 117 47.9
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 1.1e-16 90.9 114 43.0
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 1.5e-16 90.5 174 44.8
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 2.5e-16 89.7 118 42.4
QL06p009817 Quercus lobata HOM05D003565 ORTHO05D003943 2.5e-16 89.7 117 40.2
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 7.2e-16 88.2 117 43.6
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 9.4e-16 87.8 115 46.1
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.6e-15 87.0 113 46.0
BcaB04g20866 Brassica carinata HOM05D003565 ORTHO05D003943 2.1e-15 86.7 183 35.5
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.7e-15 86.3 121 43.8
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 2.7e-15 86.3 119 42.0
RcHm_v2.0_Chr4g0422901 Rosa chinensis HOM05D003565 ORTHO05D003943 2.7e-15 86.3 125 44.0
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.6e-15 85.9 115 45.2
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 4.7e-15 85.5 118 39.8
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 6.1e-15 85.1 178 33.1
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 8.0e-15 84.7 122 40.2
CsaV3_6G023960 Cucumis sativus L. HOM05D000549 ORTHO05D001527 1.0e-14 84.3 111 43.2
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 1.0e-14 84.3 105 43.8
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 1.4e-14 84.0 177 33.3
CsaV3_UNG044240 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.8e-14 83.6 112 43.8
C03p48610 Brassica napus HOM05D003565 ORTHO05D003943 2.3e-14 83.2 180 35.0
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.3e-14 83.2 176 36.4
CiPaw.02G081600 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.3e-14 83.2 123 43.9
Eucgr.H03941 Eucalyptus grandis HOM05D003565 ORTHO05D003943 2.3e-14 83.2 175 38.3
QL93p0060_0027 Quercus lobata HOM05D003565 ORTHO05D003943 2.3e-14 83.2 104 50.0
Lalb_Chr15g0083411 Lupinus albus HOM05D003565 ORTHO05D003943 6.8e-14 81.6 115 40.9
QL06p009717 Quercus lobata HOM05D003565 ORTHO05D003943 6.8e-14 81.6 104 49.0
QL93p0060_0003 Quercus lobata HOM05D003565 ORTHO05D003943 6.8e-14 81.6 104 49.0
QL06p009778 Quercus lobata HOM05D003565 ORTHO05D003943 8.8e-14 81.3 104 48.1
QL06p009796 Quercus lobata HOM05D003565 ORTHO05D003943 8.8e-14 81.3 104 48.1
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.2e-13 80.9 176 35.2
QL06p009725 Quercus lobata HOM05D003565 ORTHO05D003943 1.2e-13 80.9 104 50.0
ATR0796G036 Amborella trichopoda HOM05D003565 ORTHO05D003943 2.0e-13 80.1 115 43.5
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 2.0e-13 80.1 107 46.7
Nitab4.5_0000194g0050 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.0e-13 80.1 107 47.7
BcaC01g03788 Brassica carinata HOM05D003565 ORTHO05D003943 2.6e-13 79.7 180 35.0
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 3.4e-13 79.3 109 41.3
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 3.4e-13 79.3 113 40.7
CsaV3_6G024110 Cucumis sativus L. HOM05D000549 ORTHO05D003943 4.4e-13 79.0 111 41.4
QL06p009754 Quercus lobata HOM05D003565 ORTHO05D003943 4.4e-13 79.0 104 48.1
QL06p009790 Quercus lobata HOM05D003565 ORTHO05D003943 4.4e-13 79.0 104 50.0
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 5.7e-13 78.6 105 44.8
HPP92_006917 Vanilla planifolia HOM05D003565 ORTHO05D003943 5.7e-13 78.6 115 40.9
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 7.5e-13 78.2 120 39.2
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 9.8e-13 77.8 119 39.5
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 1.3e-12 77.4 118 42.4
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 1.7e-12 77.0 120 38.3
QL06p009739 Quercus lobata HOM05D003565 ORTHO05D003943 1.7e-12 77.0 104 48.1
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 2.2e-12 76.6 107 42.1
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 2.8e-12 76.3 119 37.0
BraA01t03781Z Brassica rapa HOM05D003565 ORTHO05D003943 3.7e-12 75.9 184 38.0
DCAR_030515 Daucus carota HOM05D003565 ORTHO05D003943 3.7e-12 75.9 102 47.1
QL06p009701 Quercus lobata HOM05D003565 ORTHO05D003943 3.7e-12 75.9 104 49.0
QL93p0060_0019 Quercus lobata HOM05D003565 ORTHO05D003943 3.7e-12 75.9 104 49.0
DCAR_030517 Daucus carota HOM05D003565 ORTHO05D003943 8.3e-12 74.7 113 43.4
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 1.1e-11 74.3 113 38.1
QL93p0060_0047 Quercus lobata HOM05D003565 ORTHO05D003943 1.4e-11 73.9 104 48.1
BraA01t03783Z Brassica rapa HOM05D003565 ORTHO05D003943 2.4e-11 73.2 184 37.5
Migut.N02472 Erythranthe guttata HOM05D003565 ORTHO05D003943 2.4e-11 73.2 121 37.2
QL06p009664 Quercus lobata HOM05D003565 ORTHO05D003943 2.4e-11 73.2 87 51.7
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 3.1e-11 72.8 118 36.4
Nitab4.5_0000493g0100 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.2e-10 70.9 120 43.3
BolC1t04684H Brassica oleracea HOM05D003565 ORTHO05D003943 2.7e-10 69.7 185 39.5
BcaC09g48665 Brassica carinata HOM05D003565 ORTHO05D003943 3.5e-10 69.3 184 40.2
A07p31290 Brassica napus HOM05D008071 ORTHO05D009954 3.5e-10 69.3 115 40.9
C01p47150 Brassica napus HOM05D003565 ORTHO05D003943 3.5e-10 69.3 184 40.2
BraA07t30762Z Brassica rapa HOM05D008071 ORTHO05D009954 3.5e-10 69.3 115 40.9
DCAR_027061 Daucus carota HOM05D003565 ORTHO05D003943 3.5e-10 69.3 120 37.5
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 7.7e-10 68.2 119 39.5
Nitab4.5_0003949g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.0e-09 67.8 119 39.5
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 1.3e-09 67.4 86 44.2
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 1.3e-09 67.4 109 39.4
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 2.3e-09 66.6 118 39.0
DCAR_022430 Daucus carota HOM05D003565 ORTHO05D003943 2.9e-09 66.2 125 40.8
DCAR_002472 Daucus carota HOM05D003565 ORTHO05D003943 3.8e-09 65.9 111 38.7
Nitab4.5_0000493g0090 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.5e-08 63.2 93 45.2
QL06p009834 Quercus lobata HOM05D003565 ORTHO05D003943 3.2e-08 62.8 118 36.4
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 4.2e-08 62.4 158 33.5
SGA_v2.0_scaffold177G39437 Striga asiatica HOM05D003565 ORTHO05D003943 4.2e-08 62.4 118 33.9
Nitab4.5_0000930g0010 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.6e-07 60.5 118 39.8
BcaB04g18929 Brassica carinata HOM05D021100 ORTHO05D021772 6.1e-07 58.5 157 31.2
Zm00001eb111390 Zea mays HOM05D003565 ORTHO05D003943 1.8e-06 57.0 115 40.9
Zm00001eb016410 Zea mays HOM05D003565 ORTHO05D003943 2.3e-06 56.6 103 39.8
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 8.8e-06 54.7 125 37.6


User provided reference genes

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