Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 2.7e-157 558.5 269 100.0
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 1.7e-143 512.7 269 90.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 2.8e-141 505.4 269 89.2
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 2.8e-141 505.4 269 88.5
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.0e-140 503.4 269 88.1
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-140 503.4 269 88.1
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-140 503.4 269 88.1
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 3.0e-140 501.9 270 87.8
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 5.2e-140 501.1 269 87.4
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 2.0e-139 499.2 269 87.7
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 9.8e-139 496.9 268 86.6
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 2.2e-138 495.7 270 86.7
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.4e-137 493.0 269 86.6
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 9.2e-137 490.3 269 85.9
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 2.7e-136 488.8 270 85.6
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 2.7e-136 488.8 270 85.9
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 6.8e-132 474.2 270 83.3
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.9e-129 466.1 289 77.5
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 7.8e-120 434.1 275 75.6
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 9.6e-110 400.6 276 70.3
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.4e-108 396.7 273 70.7
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 8.9e-108 394.0 269 70.3
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 2.6e-107 392.5 275 69.8
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 4.4e-107 391.7 275 69.5
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 7.6e-107 391.0 266 69.5
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 3.8e-106 388.7 220 78.6
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 3.8e-106 388.7 273 69.2
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 4.9e-106 388.3 239 74.1
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 4.9e-106 388.3 215 79.5
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 6.4e-106 387.9 271 69.7
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 8.4e-106 387.5 262 69.1
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.4e-105 386.7 220 78.2
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 3.2e-105 385.6 285 66.7
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 4.2e-105 385.2 220 77.7
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 5.4e-105 384.8 264 68.9
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 2.1e-104 382.9 252 68.7
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.7e-104 382.5 257 69.3
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 7.8e-104 380.9 268 67.2
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 7.8e-104 380.9 237 73.0
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.7e-103 379.8 279 66.7
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.7e-103 379.8 279 65.2
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 2.3e-103 379.4 279 65.2
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.1e-103 378.3 265 65.7
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 5.1e-103 378.3 283 66.8
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 8.7e-103 377.5 272 66.2
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.5e-102 376.7 276 65.9
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.5e-102 375.9 286 61.9
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 3.3e-102 375.6 289 64.4
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 3.3e-102 375.6 284 65.5
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 3.3e-102 375.6 254 68.9
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 4.3e-102 375.2 283 65.4
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 9.6e-102 374.0 270 65.2
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 9.6e-102 374.0 270 65.6
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 9.6e-102 374.0 280 65.7
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 1.3e-101 373.6 259 69.1
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.6e-101 373.2 244 67.2
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 4.8e-101 371.7 279 65.2
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 8.1e-101 370.9 282 66.0
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.1e-100 370.5 286 62.6
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.1e-100 370.5 280 64.3
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 1.4e-100 370.2 281 63.3
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.8e-100 369.8 267 65.9
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.8e-100 369.8 272 64.3
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 1.8e-100 369.8 241 69.3
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 1.8e-100 369.8 234 71.8
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 2.4e-100 369.4 244 70.1
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 4.0e-100 368.6 279 63.1
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 5.3e-100 368.2 286 64.7
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 5.3e-100 368.2 210 75.7
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 6.9e-100 367.9 284 62.3
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.0e-100 367.5 216 76.9
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 2.0e-99 366.3 264 66.7
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 2.6e-99 365.9 222 75.2
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 4.5e-99 365.2 279 65.2
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.5e-99 365.2 282 62.8
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 5.8e-99 364.8 289 65.1
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 5.8e-99 364.8 213 75.1
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 5.8e-99 364.8 226 71.2
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 9.9e-99 364.0 277 63.5
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-98 363.6 264 65.9
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.3e-98 363.6 252 67.1
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.9e-98 362.5 263 66.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.1e-97 360.5 281 63.3
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.9e-97 359.8 256 67.6
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 3.2e-97 359.0 269 62.1
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 7.1e-97 357.8 221 71.9
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 6.0e-96 354.8 269 63.2
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 1.8e-95 353.2 208 74.5
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 3.9e-95 352.1 278 63.7
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.5e-94 350.1 209 73.2
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 2.1e-93 346.3 208 73.6
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 2.8e-93 345.9 277 59.2
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 4.8e-93 345.1 276 60.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 6.2e-93 344.7 276 59.4
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 6.2e-93 344.7 271 60.5
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.1e-92 342.4 204 73.0
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.3e-92 341.7 281 59.8
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 7.6e-91 337.8 225 69.3
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.3e-90 337.0 195 75.9
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.2e-88 330.5 234 67.1
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 5.1e-87 325.1 218 67.4
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 3.8e-82 308.9 210 66.2
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 7.1e-81 304.7 259 57.5
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 6.9e-76 288.1 270 51.5
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 2.5e-73 279.6 278 52.9
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.1e-70 270.8 206 64.1
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.7e-69 265.8 219 53.4
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.7e-69 265.8 247 49.0
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 3.1e-68 262.7 268 48.5
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 1.2e-67 260.8 176 68.8
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.5e-67 260.4 202 55.9
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.0e-66 257.7 147 79.6
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.3e-66 257.3 210 60.5
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 4.2e-65 252.3 204 53.4
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 1.9e-57 226.9 238 50.4
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.2e-53 213.4 227 48.5
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.8e-52 210.3 147 61.2
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 5.3e-52 208.8 277 46.9
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.1e-44 183.0 174 55.7
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 1.2e-43 181.0 165 59.4
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 3.2e-33 146.4 137 55.5
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 6.1e-24 115.5 69 71.0
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.2e-22 111.3 136 43.4
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 5.2e-15 85.9 56 67.9
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 6.0e-11 72.4 37 81.1


User provided reference genes

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