Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 4.6e-39 164.1 82 100.0
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 2.1e-23 112.1 78 71.8
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 2.7e-23 111.7 78 69.2
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 2.3e-22 108.6 78 67.9
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 2.3e-22 108.6 78 67.9
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 2.3e-22 108.6 78 67.9
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 3.0e-22 108.2 79 67.1
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 2.5e-21 105.1 81 65.4
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 2.8e-20 101.7 78 65.4
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 2.8e-20 101.7 78 67.9
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 8.1e-20 100.1 78 64.1
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 3.1e-19 98.2 81 59.3
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 9.0e-19 96.7 84 61.9
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 1.5e-18 95.9 81 59.3
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 4.5e-18 94.4 60 71.7
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 1.3e-17 92.8 78 60.3
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.3e-17 92.8 79 63.3
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.3e-17 92.8 79 63.3
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 2.2e-17 92.0 70 64.3
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 2.2e-17 92.0 69 65.2
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 2.9e-17 91.7 74 60.8
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 2.9e-17 91.7 60 66.7
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 6.5e-17 90.5 85 56.5
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 8.4e-17 90.1 55 72.7
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 1.1e-16 89.7 79 59.5
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 1.1e-16 89.7 81 60.5
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 3.2e-16 88.2 55 72.7
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 4.2e-16 87.8 81 55.6
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 4.2e-16 87.8 69 65.2
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 4.2e-16 87.8 73 60.3
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 5.5e-16 87.4 53 75.5
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 5.5e-16 87.4 63 66.7
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 7.1e-16 87.0 72 61.1
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 7.1e-16 87.0 53 75.5
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 9.3e-16 86.7 81 54.3
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 1.2e-15 86.3 73 56.2
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.2e-15 86.3 69 60.9
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 1.6e-15 85.9 83 57.8
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.6e-15 85.9 73 58.9
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.1e-15 85.5 73 58.9
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.1e-15 85.5 73 58.9
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 2.1e-15 85.5 87 57.5
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 2.7e-15 85.1 76 60.5
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 2.7e-15 85.1 78 60.3
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 3.5e-15 84.7 53 69.8
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 4.6e-15 84.3 77 55.8
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 7.9e-15 83.6 79 55.7
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 7.9e-15 83.6 79 55.7
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 2.3e-14 82.0 54 68.5
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 3.9e-14 81.3 54 63.0
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 3.9e-14 81.3 57 66.7
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 3.9e-14 81.3 55 69.1
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 3.9e-14 81.3 54 66.7
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 5.1e-14 80.9 50 74.0
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 5.1e-14 80.9 70 54.3
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 5.1e-14 80.9 57 66.7
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 8.7e-14 80.1 81 50.6
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 8.7e-14 80.1 70 52.9
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 8.7e-14 80.1 59 64.4
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 8.7e-14 80.1 78 48.7
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 1.9e-13 79.0 82 50.0
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 1.9e-13 79.0 54 66.7
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 2.5e-13 78.6 51 70.6
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 7.4e-13 77.0 57 63.2
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 1.3e-12 76.3 59 61.0
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 1.6e-12 75.9 79 50.6
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.1e-12 75.5 72 55.6
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 4.8e-12 74.3 54 66.7
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 3.1e-11 71.6 70 55.7
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 5.3e-11 70.9 53 67.9
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 1.2e-10 69.7 48 70.8
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 1.5e-10 69.3 77 50.6
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 4.5e-10 67.8 58 56.9
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 4.5e-10 67.8 70 51.4
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 3.0e-06 55.1 61 47.5
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 3.9e-06 54.7 54 48.1


User provided reference genes

Program Settings