Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.2e-117 424.5 269 100.0
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.7e-71 271.2 180 83.3
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.0e-59 233.4 139 82.0
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.3e-58 230.7 215 60.5
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.7e-55 218.4 149 71.8
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.8e-55 218.0 205 59.0
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.4e-54 215.7 131 79.4
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.7e-54 215.3 199 59.3
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.3e-53 214.2 144 72.2
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.4e-52 209.9 119 82.4
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.4e-52 209.9 205 58.5
Aa31LG6G10180 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.5e-46 188.3 190 54.2
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.3e-45 185.3 181 51.4
Aa31LG7G1540 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.1e-41 174.5 143 60.8
Aa31LG8G17190 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-40 171.0 136 63.2
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.8e-38 161.4 140 57.9
Aa31LG7G1510 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.2e-37 160.2 136 59.6
Aa31LG7G1580 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.2e-37 160.2 122 65.6
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.4e-36 156.8 144 56.9
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 1.3e-29 134.4 121 55.4
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 1.3e-29 134.4 121 55.4
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 6.3e-29 132.1 120 55.0
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.4e-28 131.0 133 51.1
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 2.4e-28 130.2 133 50.4
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 4.1e-28 129.4 122 53.3
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 5.4e-28 129.0 120 54.2
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 5.9e-27 125.6 122 51.6
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.7e-26 124.0 133 48.1
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.9e-26 123.2 131 48.1
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 8.6e-26 121.7 153 42.5
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 1.1e-25 121.3 153 41.8
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.5e-25 120.9 122 51.6
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.6e-24 117.5 113 48.7
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.6e-24 117.5 114 52.6
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 6.1e-24 115.5 153 40.5
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 1.4e-23 114.4 153 40.5
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 8.9e-23 111.7 131 44.3
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.0e-22 110.5 98 60.2
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 2.0e-22 110.5 130 48.5
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 2.0e-22 110.5 130 48.5
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 2.0e-22 110.5 130 48.5
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 2.0e-22 110.5 120 47.5
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 5.7e-22 109.0 130 47.7
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 7.5e-22 108.6 136 44.1
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 4.9e-21 105.9 130 43.8
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 1.8e-20 104.0 114 45.6
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 1.8e-20 104.0 114 45.6
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 3.2e-20 103.2 130 43.1
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 5.4e-20 102.4 146 41.8
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 1.2e-19 101.3 114 44.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 1.2e-19 101.3 130 46.2
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 1.3e-18 97.8 144 37.5
Aa31LG6G9560 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.5e-17 91.7 73 67.1
Aa31LG8G17180 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.6e-16 90.9 60 68.3
Aa31LG6G9550 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.7e-16 89.4 57 71.9
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 4.7e-16 89.4 101 51.5
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 6.2e-16 89.0 136 38.2
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.8e-15 87.4 108 40.7
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 1.8e-15 87.4 117 38.5
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 2.3e-15 87.0 120 36.7
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 5.2e-15 85.9 113 38.9
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.2e-15 85.9 113 38.9
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.2e-15 85.9 113 38.9
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 5.2e-15 85.9 139 36.7
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 6.8e-15 85.5 125 37.6
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 6.8e-15 85.5 127 36.2
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 6.8e-15 85.5 127 36.2
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.2e-14 84.7 134 35.8
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 1.5e-14 84.3 152 36.8
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 1.5e-14 84.3 137 34.3
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 1.5e-14 84.3 131 35.1
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 1.5e-14 84.3 122 35.2
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.0e-14 84.0 127 36.2
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 2.0e-14 84.0 110 41.8
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 7.5e-14 82.0 129 34.1
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 7.5e-14 82.0 119 37.0
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 9.8e-14 81.6 154 35.7
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 9.8e-14 81.6 154 35.7
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 9.8e-14 81.6 135 36.3
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 9.8e-14 81.6 113 39.8
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 9.8e-14 81.6 111 41.4
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 1.3e-13 81.3 156 35.3
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.7e-13 80.9 108 38.9
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.7e-13 80.9 131 35.1
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 2.2e-13 80.5 148 35.8
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 2.2e-13 80.5 127 35.4
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.9e-13 80.1 131 35.1
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 2.9e-13 80.1 144 33.3
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 3.7e-13 79.7 129 40.3
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 4.9e-13 79.3 115 38.3
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 4.9e-13 79.3 107 41.1
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 6.4e-13 79.0 131 35.1
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 6.4e-13 79.0 144 33.3
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 8.3e-13 78.6 105 38.1
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-12 78.2 109 37.6
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 1.1e-12 78.2 144 32.6
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 1.9e-12 77.4 144 32.6
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 1.9e-12 77.4 120 36.7
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 2.4e-12 77.0 124 37.1
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 3.2e-12 76.6 132 34.8
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 4.1e-12 76.3 148 35.8
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 4.1e-12 76.3 148 35.8
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 5.4e-12 75.9 134 32.8
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 1.2e-11 74.7 109 41.3
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 2.0e-11 73.9 129 32.6
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 2.7e-11 73.6 128 32.8
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 2.7e-11 73.6 107 36.4
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 2.7e-11 73.6 104 39.4
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 3.5e-11 73.2 134 36.6
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 3.5e-11 73.2 113 38.1
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 3.5e-11 73.2 107 37.4
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 4.6e-11 72.8 107 37.4
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.0e-10 71.6 104 35.6
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 1.0e-10 71.6 134 35.8
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.0e-10 71.6 131 32.1
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.7e-10 70.9 110 37.3
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 2.3e-10 70.5 104 38.5
Aa31LG7G1570 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.0e-10 70.1 57 64.9
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 3.0e-10 70.1 114 36.0
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 3.9e-10 69.7 130 33.1
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 6.6e-10 68.9 122 36.9
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 8.6e-10 68.6 105 39.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 1.1e-09 68.2 133 29.3
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 1.9e-09 67.4 126 31.7
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 1.9e-09 67.4 154 31.2
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.6e-09 65.9 139 30.2
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 2.1e-08 63.9 113 31.9
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 2.1e-08 63.9 137 33.6
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 3.1e-07 60.1 116 31.0
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.2e-06 58.2 106 36.8
Sed0021385 Sechium edule HOM05D000896 ORTHO05D000594 1.2e-06 58.2 125 30.4
PGSC0003DMG400000107 Solanum tuberosum HOM05D015341 ORTHO05D011718 1.2e-06 58.2 114 35.1
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 1.5e-06 57.8 94 36.2
BcaC01g00056 Brassica carinata HOM05D010480 ORTHO05D003856 3.4e-06 56.6 102 42.2
Dinv32585 Davidia involucrata HOM05D013692 ORTHO05D011718 4.4e-06 56.2 112 33.9
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 5.8e-06 55.8 104 32.7


User provided reference genes

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