Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 7.8e-310 1066.2 521 100.0
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 4.6e-294 1013.8 521 94.0
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.1e-292 1009.2 521 93.7
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.5e-292 1008.1 521 93.7
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.6e-291 1005.4 521 93.5
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 2.9e-288 994.6 521 92.1
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 4.9e-288 993.8 521 91.7
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.3e-285 985.7 520 90.6
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 1.8e-285 985.3 521 90.6
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 1.8e-285 985.3 521 90.6
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 3.0e-285 984.6 521 90.4
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 3.9e-285 984.2 521 90.4
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.9e-284 981.9 521 90.0
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 1.9e-284 981.9 520 90.0
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 1.9e-284 981.9 520 90.0
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 7.4e-284 979.9 521 90.0
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 2.8e-283 978.0 518 90.0
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 2.8e-283 978.0 518 90.0
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.8e-282 975.3 520 89.4
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.4e-282 974.9 520 89.4
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 2.0e-281 971.8 519 89.6
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 2.1e-278 961.8 522 88.5
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 6.9e-274 946.8 521 86.8
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.5e-268 929.1 521 84.8
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 5.9e-265 917.1 521 83.7
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 2.0e-260 902.1 521 82.9
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 7.4e-260 900.2 521 82.0
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 3.1e-258 894.8 519 81.7
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 9.1e-258 893.3 521 81.2
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 2.0e-257 892.1 519 81.5
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.3e-256 889.4 518 81.9
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.9e-256 888.3 521 80.6
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 5.5e-255 884.0 521 80.6
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 1.2e-254 882.9 521 82.1
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 1.8e-253 879.0 517 80.3
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.0e-253 877.9 521 79.5
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.0e-253 877.9 524 80.0
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 8.8e-253 876.7 521 78.9
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 8.8e-253 876.7 521 79.7
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.8e-253 876.7 520 80.2
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.5e-252 875.9 520 80.0
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-252 875.5 524 80.0
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-252 875.5 524 80.0
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-252 875.5 524 80.0
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 5.7e-252 874.0 522 80.8
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 9.7e-252 873.2 517 80.9
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.3e-251 872.8 545 77.1
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.7e-251 872.5 514 81.1
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 1.7e-251 872.5 518 79.9
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.1e-250 869.8 517 79.5
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.1e-250 869.8 521 79.1
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 3.1e-250 868.2 520 79.2
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.1e-250 867.8 521 78.7
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 4.1e-250 867.8 519 78.8
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 9.1e-250 866.7 521 79.3
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.7e-249 865.1 521 78.9
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 2.7e-249 865.1 519 79.0
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.7e-249 865.1 521 79.1
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 4.5e-249 864.4 519 79.6
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 3.8e-248 861.3 545 76.1
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 3.8e-248 861.3 519 79.2
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 6.5e-248 860.5 517 80.5
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 9.4e-247 856.7 521 78.9
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.6e-246 855.9 531 77.6
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 2.1e-246 855.5 521 77.7
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 4.0e-245 851.3 521 77.5
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 6.8e-245 850.5 521 77.2
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 5.7e-244 847.4 522 76.8
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 9.8e-244 846.7 518 78.4
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 1.3e-243 846.3 521 76.6
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 1.7e-243 845.9 521 76.6
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.2e-243 845.5 521 78.1
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 1.8e-242 842.4 522 76.6
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 9.1e-242 840.1 521 76.4
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-241 839.7 555 74.1
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 2.0e-241 839.0 522 75.9
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.7e-241 838.6 519 76.3
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 3.5e-241 838.2 522 75.5
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 1.3e-240 836.3 521 77.0
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 2.3e-240 835.5 521 77.0
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 6.6e-240 833.9 521 76.6
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 8.6e-240 833.6 519 77.1
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.5e-239 832.8 527 75.1
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 4.2e-239 831.2 521 75.0
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 7.2e-239 830.5 521 76.8
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 9.5e-239 830.1 518 75.9
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 1.6e-238 829.3 521 76.2
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 2.1e-238 828.9 521 76.2
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 4.7e-238 827.8 521 76.0
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 6.1e-238 827.4 521 74.9
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 2.3e-237 825.5 515 75.7
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 5.2e-237 824.3 521 76.2
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.4e-236 821.6 516 76.6
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 4.4e-236 821.2 493 78.9
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.3e-235 819.7 517 75.4
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 1.3e-235 819.7 520 74.6
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 3.7e-235 818.1 518 76.1
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 6.3e-235 817.4 521 75.4
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 8.3e-235 817.0 521 76.0
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.4e-234 815.5 467 83.3
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 5.4e-234 814.3 523 74.4
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 7.8e-233 810.4 523 74.4
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 1.3e-232 809.7 525 74.3
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 7.3e-231 803.9 520 73.3
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 7.3e-231 803.9 521 74.3
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 1.6e-230 802.7 520 73.1
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 3.6e-230 801.6 521 74.1
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 1.4e-229 799.7 522 73.0
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.8e-229 799.3 465 82.6
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 8.9e-229 797.0 519 74.8
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.2e-228 796.6 531 72.3
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.5e-228 796.2 467 81.6
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 2.9e-227 792.0 517 73.5
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 8.3e-227 790.4 517 73.3
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 3.2e-226 788.5 510 75.5
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 9.2e-226 786.9 520 71.9
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 1.2e-225 786.6 477 77.4
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 2.7e-225 785.4 516 73.1
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.0e-224 783.5 521 73.1
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 1.7e-224 782.7 468 78.4
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.6e-222 776.2 491 75.4
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 1.6e-222 776.2 550 69.8
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 1.8e-221 772.7 517 71.0
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 2.3e-221 772.3 554 69.1
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 5.2e-221 771.2 470 78.3
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 2.6e-220 768.8 562 69.8
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.9e-219 764.6 471 76.4
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.4e-218 762.3 574 66.0
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 5.4e-218 761.1 520 70.4
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.3e-215 751.9 519 69.9
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 7.3e-215 750.7 521 69.7
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 4.7e-214 748.0 521 69.5
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 1.8e-213 746.1 521 69.5
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.8e-213 746.1 521 70.1
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 2.3e-213 745.7 521 70.1
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 3.4e-212 741.9 521 69.1
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 9.2e-210 733.8 521 68.9
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 2.4e-205 719.2 541 65.8
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 4.7e-198 694.9 521 65.8
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 5.3e-197 691.4 520 66.2
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 2.0e-196 689.5 504 70.6
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 5.3e-189 664.8 378 81.7
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 6.7e-184 647.9 383 80.4
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.8e-182 641.7 481 65.5
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 1.8e-181 639.8 381 78.7
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 1.3e-179 633.6 481 66.3
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.7e-179 633.3 562 59.1
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 5.8e-172 608.2 487 60.2
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 4.6e-169 598.6 447 62.6
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.8e-158 562.0 293 91.5
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.5e-156 557.0 473 57.5
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 9.4e-154 547.7 522 54.2
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 1.4e-141 507.3 353 69.7
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 3.8e-131 472.6 292 75.7
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 9.8e-127 458.0 292 75.0
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.4e-125 454.1 289 76.5
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 1.8e-125 453.8 289 76.1
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.4e-125 452.2 265 77.7
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 6.0e-108 395.6 250 74.4
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 2.7e-100 370.2 245 74.7
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.9e-77 294.3 204 68.6
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 4.5e-55 219.9 474 31.9
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 5.8e-55 219.5 132 75.0
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 1.1e-53 215.3 469 31.1
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 4.5e-39 166.8 134 58.2
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.8e-38 163.7 204 47.5
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 7.4e-34 149.4 114 64.9
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 1.1e-26 125.6 86 72.1
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.4e-21 105.9 143 47.6
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 9.4e-21 105.9 58 79.3
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 4.4e-18 97.1 156 35.3
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.3e-17 95.5 59 74.6
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.0e-11 75.9 173 33.5
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 9.2e-08 62.8 55 60.0
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.9e-07 60.1 37 75.7
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 7.7e-07 59.7 66 48.5


User provided reference genes

Program Settings