Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 4.0e-119 431.4 213 100.0
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 2.8e-88 328.9 214 77.6
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.7e-85 319.7 213 75.6
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 7.9e-83 310.8 214 73.8
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.0e-82 310.5 213 73.7
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 8.7e-82 307.4 213 74.6
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.5e-81 306.6 213 74.2
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.5e-81 306.6 213 74.2
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.5e-81 306.6 213 74.2
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.9e-81 306.2 213 74.2
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 7.4e-81 304.3 213 70.4
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 9.6e-81 303.9 213 73.7
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 4.8e-80 301.6 215 72.6
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 9.3e-76 287.3 170 82.4
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 5.5e-68 261.5 218 62.4
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 4.5e-62 241.9 217 58.5
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 2.5e-60 236.1 180 66.1
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 4.2e-60 235.3 218 59.2
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 4.7e-59 231.9 188 64.4
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 4.7e-59 231.9 221 57.9
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 7.9e-59 231.1 217 55.8
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.0e-58 230.7 220 57.7
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 2.3e-58 229.6 220 57.3
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.0e-58 229.2 215 55.3
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 3.0e-58 229.2 215 56.3
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 3.9e-58 228.8 215 59.5
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 5.1e-58 228.4 221 57.0
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 5.1e-58 228.4 216 56.9
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 5.1e-58 228.4 215 56.3
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 1.1e-57 227.3 218 57.8
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 1.5e-57 226.9 214 59.3
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 2.0e-57 226.5 212 58.0
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 2.0e-57 226.5 214 58.4
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.6e-57 226.1 215 60.5
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 7.4e-57 224.6 217 56.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 7.4e-57 224.6 217 56.7
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.7e-56 223.4 212 56.6
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.2e-56 223.0 213 56.8
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 2.2e-56 223.0 215 55.8
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 2.8e-56 222.6 212 59.0
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.8e-56 222.6 214 57.0
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 3.7e-56 222.2 215 57.7
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 3.7e-56 222.2 164 68.3
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 3.7e-56 222.2 181 59.7
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 6.3e-56 221.5 212 54.2
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 8.2e-56 221.1 164 67.1
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.4e-55 220.3 217 55.3
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 2.4e-55 219.5 221 56.1
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.1e-55 219.2 222 56.8
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 3.1e-55 219.2 215 56.7
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 5.3e-55 218.4 203 56.7
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 9.1e-55 217.6 217 54.4
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 9.1e-55 217.6 211 55.9
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.6e-54 216.9 218 56.4
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 2.0e-54 216.5 179 61.5
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 2.6e-54 216.1 242 49.6
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 2.6e-54 216.1 214 53.7
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 2.6e-54 216.1 180 60.0
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 4.5e-54 215.3 187 57.2
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 5.9e-54 214.9 216 53.7
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 7.7e-54 214.5 180 59.4
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.3e-53 213.8 175 61.1
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.3e-53 213.8 174 63.2
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.7e-53 213.4 220 51.4
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.7e-53 213.4 185 56.8
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 2.2e-53 213.0 179 57.5
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 2.2e-53 213.0 214 53.7
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 3.8e-53 212.2 168 64.3
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 3.8e-53 212.2 191 59.2
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 5.0e-53 211.8 217 51.6
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 5.0e-53 211.8 214 55.1
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 8.5e-53 211.1 210 53.8
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.1e-52 210.7 215 50.2
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.9e-52 209.9 189 56.1
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 2.5e-52 209.5 201 55.2
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 2.5e-52 209.5 216 54.6
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.2e-52 209.1 182 60.4
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 3.2e-52 209.1 198 55.6
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 3.2e-52 209.1 205 56.6
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.2e-52 208.8 182 58.2
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 7.2e-52 208.0 170 61.8
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 9.4e-52 207.6 188 58.5
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.2e-51 207.2 209 53.1
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 1.2e-51 207.2 168 62.5
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 4.7e-51 205.3 164 62.8
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 4.7e-51 205.3 196 54.6
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 8.0e-51 204.5 164 62.8
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 1.4e-50 203.8 185 56.8
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.3e-50 203.0 226 52.2
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 2.3e-50 203.0 209 54.5
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 3.0e-50 202.6 240 50.8
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.1e-49 200.7 164 62.2
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 2.0e-49 199.9 219 48.9
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 5.7e-49 198.4 208 53.8
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 2.8e-48 196.1 179 58.7
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 4.1e-47 192.2 189 53.4
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 2.7e-46 189.5 149 63.1
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 2.7e-46 189.5 164 57.9
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.3e-45 187.2 210 50.5
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 5.0e-45 185.3 169 58.6
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.6e-41 172.9 203 46.3
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 2.8e-40 169.5 207 48.3
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 2.0e-33 146.7 196 43.9
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 2.0e-33 146.7 199 42.2
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 5.7e-33 145.2 171 47.4
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 2.8e-32 142.9 192 42.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 3.7e-32 142.5 164 45.7
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 4.1e-31 139.0 183 41.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.2e-30 137.5 126 59.5
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 7.3e-28 128.3 234 36.8
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.2e-22 110.9 197 35.0
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 1.0e-21 107.8 106 52.8
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 2.3e-21 106.7 193 35.8
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.0e-21 106.3 193 35.8
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 1.9e-20 103.6 98 55.1
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 5.6e-20 102.1 195 33.3
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 6.4e-16 88.6 137 38.0
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 4.1e-15 85.9 102 46.1
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 3.3e-12 76.3 105 46.7
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 6.0e-06 55.5 107 34.6


User provided reference genes

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