Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G13290 Aethionema arabicum HOM05D007083 ORTHO05D008801 1.3e-128 464.5 238 100.0
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 4.1e-82 310.1 236 68.2
CARHR106000 Cardamine hirsuta HOM05D007083 ORTHO05D008801 5.5e-79 299.7 236 67.8
C07p08180 Brassica napus HOM05D007083 ORTHO05D008801 9.7e-76 288.9 234 65.0
BcaC06g36074 Brassica carinata HOM05D007083 ORTHO05D008801 1.3e-75 288.5 234 65.0
BolC7t41234H Brassica oleracea HOM05D007083 ORTHO05D008801 1.3e-75 288.5 234 65.0
A07p05120 Brassica napus HOM05D007083 ORTHO05D008801 1.1e-74 285.4 232 65.1
BraA07t28306Z Brassica rapa HOM05D007083 ORTHO05D008801 4.1e-74 283.5 232 64.7
AT2G15630 Arabidopsis thaliana HOM05D007083 ORTHO05D008801 1.3e-72 278.5 228 64.5
AL3G47400 Arabidopsis lyrata HOM05D007083 ORTHO05D008801 6.5e-72 276.2 234 61.5
BcaB03g14591 Brassica carinata HOM05D007083 ORTHO05D008801 9.1e-66 255.8 227 59.5
Thhalv10022592m.g Eutrema salsugineum HOM05D007083 ORTHO05D008801 2.1e-62 244.6 230 59.1
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 5.4e-58 229.9 237 53.6
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 3.4e-52 210.7 206 50.0
Gohir.D12G042300 Gossypium hirsutum HOM05D007083 ORTHO05D008801 4.9e-51 206.8 204 50.0
Gorai.008G044300 Gossypium raimondii HOM05D007083 ORTHO05D008801 6.3e-51 206.5 201 50.7
Cpa.g.sc109.26 Carica papaya HOM05D007083 ORTHO05D008801 4.1e-50 203.8 232 50.4
Duzib052G0394 Durio zibethinus HOM05D007083 ORTHO05D008801 7.0e-50 203.0 221 51.1
Thecc.02G028500 Theobroma cacao HOM05D007083 ORTHO05D008801 7.0e-50 203.0 207 49.8
QL11p039208 Quercus lobata HOM05D007083 ORTHO05D008801 9.1e-50 202.6 229 48.5
Gohir.A12G030100 Gossypium hirsutum HOM05D007083 ORTHO05D008801 7.7e-49 199.5 204 49.5
Ciclev10030406m.g Citrus clementina HOM05D007083 ORTHO05D008801 2.3e-48 198.0 188 51.1
Manes.15G145600 Manihot esculenta HOM05D007083 ORTHO05D008801 2.3e-48 198.0 183 53.6
Eucgr.J00091 Eucalyptus grandis HOM05D007083 ORTHO05D008801 8.6e-48 196.1 204 51.5
PGR042G0769 Punica granatum HOM05D007083 ORTHO05D008801 3.3e-47 194.1 200 51.5
Potri.004G147700 Populus trichocarpa HOM05D007083 ORTHO05D008801 1.8e-45 188.3 229 44.1
Sabra18G0050700 Salix brachista HOM05D007083 ORTHO05D008801 1.2e-44 185.7 185 49.2
CiPaw.06G139300 Carya illinoinensis HOM05D007083 ORTHO05D008801 9.8e-44 182.6 181 50.8
Lj2P412T37 Lonicera japonica HOM05D007083 ORTHO05D008801 1.3e-43 182.2 188 47.3
TAR369G0752 Trochodendron aralioides HOM05D007083 ORTHO05D008801 4.9e-43 180.3 220 44.1
Glyma.12G048300 Glycine max HOM05D007083 ORTHO05D008801 8.3e-43 179.5 187 49.2
CANSAT25G2501 Cannabis sativa HOM05D007083 ORTHO05D008801 1.4e-42 178.7 206 44.7
CAN.G322.86 Capsicum annuum HOM05D007083 ORTHO05D008801 5.4e-42 176.8 212 44.8
GSVIVG01029769001 Vitis vinifera HOM05D007083 ORTHO05D008801 7.0e-42 176.4 207 43.5
Haze_02465 Corylus avellana HOM05D007083 ORTHO05D008801 2.0e-41 174.9 169 50.9
Dinv23578 Davidia involucrata HOM05D007083 ORTHO05D008801 7.8e-41 172.9 206 45.1
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 7.8e-41 172.9 204 45.6
PGSC0003DMG400025930 Solanum tuberosum HOM05D007083 ORTHO05D008801 1.3e-40 172.2 217 43.3
Cfa004946 Carpinus fangiana HOM05D007083 ORTHO05D008801 1.7e-40 171.8 219 45.2
Phvul.001G085800 Phaseolus vulgaris HOM05D007083 ORTHO05D008801 3.9e-40 170.6 183 47.0
VMungo1383G2401 Vigna mungo HOM05D007083 ORTHO05D008801 3.9e-40 170.6 185 47.6
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 6.6e-40 169.9 210 45.2
CSS0008892 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 8.6e-40 169.5 228 41.2
CSS0024065 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 8.6e-40 169.5 228 41.2
Atru.chr13.1400 Acer truncatum HOM05D007083 ORTHO05D008801 1.1e-39 169.1 164 54.3
Cc02_g18190 Coffea canephora HOM05D007083 ORTHO05D008801 1.1e-39 169.1 206 46.6
Nitab4.5_0001401g0200 Nicotiana tabacum HOM05D007083 ORTHO05D008801 1.1e-39 169.1 209 44.0
MELO3C018417.2 Cucumis melo HOM05D007083 ORTHO05D008801 1.2e-38 165.6 191 45.5
Atru.chr5.2875 Acer truncatum HOM05D007083 ORTHO05D008801 2.1e-38 164.9 148 55.4
CsaV3_7G010110 Cucumis sativus L. HOM05D007083 ORTHO05D008801 3.6e-38 164.1 191 45.5
SHI08173 Sapria himalayana HOM05D007083 ORTHO05D008801 6.1e-38 163.3 177 46.9
QL11p039212 Quercus lobata HOM05D007083 ORTHO05D008801 3.1e-37 161.0 232 42.2
Rhsim05G0078900 Rhododendron simsii HOM05D007083 ORTHO05D008801 6.8e-37 159.8 210 41.0
Nn7g35939 Nelumbo nucifera HOM05D007083 ORTHO05D008801 8.9e-37 159.5 177 45.8
FAN20G1975 Fragaria x ananassa HOM05D007083 ORTHO05D008801 1.2e-36 159.1 174 46.6
Sc18g0004860 Simmondsia chinensis HOM05D007083 ORTHO05D008801 1.2e-36 159.1 213 40.8
TWI31G0787 Tripterygium wilfordii HOM05D007083 ORTHO05D008801 1.5e-36 158.7 189 47.1
EL10Ac9g21792 Beta vulgaris HOM05D007083 ORTHO05D008801 2.0e-36 158.3 225 40.4
Sc18g0004780 Simmondsia chinensis HOM05D007083 ORTHO05D008801 2.6e-36 157.9 183 45.9
arahy.Tifrunner.gnm1.ann1.JD2ZC9 Arachis hypogaea HOM05D007083 ORTHO05D008801 3.4e-36 157.5 209 43.1
DCAR_003627 Daucus carota HOM05D007083 ORTHO05D008801 2.9e-35 154.5 220 40.5
MSTRG.5378 Avicennia marina HOM05D007083 ORTHO05D008801 3.7e-35 154.1 180 45.0
Sabra04G0098000 Salix brachista HOM05D007083 ORTHO05D008801 4.9e-35 153.7 151 49.7
arahy.Tifrunner.gnm1.ann1.CNDX61 Arachis hypogaea HOM05D007083 ORTHO05D008801 2.4e-34 151.4 215 41.9
Lsat_1_v5_gn_0_45320 Lactuca sativa HOM05D007083 ORTHO05D008801 5.4e-34 150.2 179 42.5
Lsat_1_v5_gn_5_117460 Lactuca sativa HOM05D007083 ORTHO05D008801 5.4e-34 150.2 179 42.5
Lj3g0002320 Lotus japonicus HOM05D007083 ORTHO05D008801 9.2e-34 149.4 210 40.5
Potri.009G109001 Populus trichocarpa HOM05D007083 ORTHO05D008801 1.2e-33 149.1 160 47.5
Medtr4g068360 Medicago truncatula HOM05D007083 ORTHO05D008801 1.6e-33 148.7 204 40.7
ClCG02G005520 Citrullus lanatus HOM05D007083 ORTHO05D008801 4.6e-33 147.1 180 43.3
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 1.7e-32 145.2 219 38.8
Sed0019239 Sechium edule HOM05D007083 ORTHO05D008801 1.1e-31 142.5 148 48.6
FAN24G0977 Fragaria x ananassa HOM05D007083 ORTHO05D008801 1.5e-31 142.1 182 41.8
Glyma.11G123700 Glycine max HOM05D007083 ORTHO05D008801 2.5e-31 141.4 175 43.4
AUR62011398 Chenopodium quinoa HOM05D007083 ORTHO05D008801 5.6e-31 140.2 210 40.0
FvH4_2g07360 Fragaria vesca HOM05D007083 ORTHO05D008801 1.6e-30 138.7 163 42.9
Ah.01g019870 Amaranthus hybridus HOM05D007083 ORTHO05D008801 2.1e-30 138.3 207 39.6
AUR62016660 Chenopodium quinoa HOM05D007083 ORTHO05D008801 4.7e-30 137.1 227 36.1
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 4.7e-30 137.1 182 37.9
MBI19_g17433_MAGBIO Magnolia biondii HOM05D007083 ORTHO05D008801 8.9e-29 132.9 191 37.7
RcHm_v2.0_Chr6g0259961 Rosa chinensis HOM05D007083 ORTHO05D008801 8.9e-29 132.9 193 38.3
Actinidia17838 Actinidia chinensis HOM05D007083 ORTHO05D008801 1.5e-28 132.1 215 37.2
Aqoxy7G03503 Aquilegia oxysepala HOM05D007083 ORTHO05D008801 3.7e-27 127.5 157 41.4
ATR0598G052 Amborella trichopoda HOM05D007083 ORTHO05D008801 1.4e-26 125.6 191 36.6
ECA236G1626 Erigeron canadensis HOM05D007083 ORTHO05D008801 3.2e-26 124.4 170 37.6
COL.COLO4_17774 Corchorus olitorius HOM05D007083 ORTHO05D008801 5.6e-23 113.6 151 45.0
HPP92_019625 Vanilla planifolia HOM05D007083 ORTHO05D008801 7.3e-23 113.2 186 38.7
Carub.0003s2940 Capsella rubella HOM05D007083 ORTHO05D008801 1.6e-22 112.1 61 82.0
SalBow3G3241 Salvia bowleyana HOM05D001193 ORTHO05D001016 1.1e-21 109.4 164 39.6
PSO339G4029 Papaver somniferum HOM05D007083 ORTHO05D008801 1.4e-18 99.0 172 32.6
RcHm_v2.0_Chr2g0124591 Rosa chinensis HOM05D007083 ORTHO05D008801 3.2e-18 97.8 78 57.7
PSO384G4964 Papaver somniferum HOM05D007083 ORTHO05D008801 7.1e-18 96.7 185 31.4
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 6.8e-13 80.1 163 31.3
TPR.G10240 Trifolium pratense HOM05D007083 ORTHO05D008801 2.0e-12 78.6 78 46.2
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.6e-12 78.2 202 30.7
QL04p060976 Quercus lobata HOM05D006931 ORTHO05D008782 7.6e-12 76.6 178 29.2
Gohir.A04G115700 Gossypium hirsutum HOM05D007083 ORTHO05D008801 9.9e-12 76.3 51 62.7
Migut.N01212 Erythranthe guttata HOM05D007083 ORTHO05D008801 1.7e-11 75.5 161 31.7
Sed0019973 Sechium edule HOM05D006931 ORTHO05D008782 3.8e-11 74.3 180 29.4
Psat7g208080 Pisum sativum HOM05D007083 ORTHO05D008801 4.9e-11 73.9 57 54.4
FAN05G5053 Fragaria x ananassa HOM05D006931 ORTHO05D008782 6.4e-11 73.6 178 27.5
FAN02G4040 Fragaria x ananassa HOM05D006931 ORTHO05D008782 1.4e-10 72.4 178 27.5
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.9e-10 72.0 178 29.2
FvH4_6g40750 Fragaria vesca HOM05D006931 ORTHO05D008782 2.4e-10 71.6 178 27.0
FAN14G4269 Fragaria x ananassa HOM05D006931 ORTHO05D008782 2.4e-10 71.6 178 27.0
RcHm_v2.0_Chr2g0156201 Rosa chinensis HOM05D006931 ORTHO05D008782 3.2e-10 71.2 178 27.5
SHI10148 Sapria himalayana HOM05D006931 ORTHO05D008782 3.2e-10 71.2 175 27.4
TAR629G3292 Trochodendron aralioides HOM05D006931 ORTHO05D008782 5.4e-10 70.5 169 31.4
SEGI_00853 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 9.3e-10 69.7 182 30.2
Sabra14G0126400 Salix brachista HOM05D006931 ORTHO05D008782 1.2e-09 69.3 176 28.4
Ah.10g034380 Amaranthus hybridus HOM05D006931 ORTHO05D008782 1.6e-09 68.9 169 27.2
Thecc.01G192500 Theobroma cacao HOM05D006931 ORTHO05D008782 1.6e-09 68.9 178 28.1
BcaC01g03329 Brassica carinata HOM05D007083 ORTHO05D008801 2.7e-09 68.2 60 56.7
ATR1159G005 Amborella trichopoda HOM05D006931 ORTHO05D008782 3.5e-09 67.8 177 26.6
Gohir.A04G119800 Gossypium hirsutum HOM05D006931 ORTHO05D008782 3.5e-09 67.8 178 26.4
RcHm_v2.0_Chr6g0260161 Rosa chinensis HOM05D007083 ORTHO05D008801 3.5e-09 67.8 50 58.0
CsaV3_6G009550 Cucumis sativus L. HOM05D006931 ORTHO05D008782 4.6e-09 67.4 180 29.4
Gohir.D04G161400 Gossypium hirsutum HOM05D006931 ORTHO05D008782 4.6e-09 67.4 178 27.0
Gorai.012G149400 Gossypium raimondii HOM05D006931 ORTHO05D008782 4.6e-09 67.4 178 26.4
RcHm_v2.0_Chr6g0260531 Rosa chinensis HOM05D007083 ORTHO05D008801 4.6e-09 67.4 43 65.1
Atru.BG.59.p Acer truncatum HOM05D007083 ORTHO05D008801 6.0e-09 67.0 124 35.5
EL10Ac6g15337 Beta vulgaris HOM05D006931 ORTHO05D008782 6.0e-09 67.0 180 26.1
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 6.0e-09 67.0 196 27.6
Ciclev10018243m.g Citrus clementina HOM05D006931 ORTHO05D008782 7.8e-09 66.6 178 27.0
RcHm_v2.0_Chr6g0260661 Rosa chinensis HOM05D007083 ORTHO05D008801 1.0e-08 66.2 43 65.1
vmacro12097 Vaccinium macrocarpon HOM05D006931 ORTHO05D008782 1.0e-08 66.2 169 27.8
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 2.3e-08 65.1 163 28.2
RcHm_v2.0_Chr6g0266771 Rosa chinensis HOM05D007083 ORTHO05D008801 2.3e-08 65.1 43 65.1
arahy.Tifrunner.gnm1.ann1.NUL68I Arachis hypogaea HOM05D002890 ORTHO05D009847 3.0e-08 64.7 194 25.3
MELO3C025970.2 Cucumis melo HOM05D006931 ORTHO05D008782 3.0e-08 64.7 180 28.3
Eucgr.G01771 Eucalyptus grandis HOM05D006931 ORTHO05D008782 3.0e-08 64.7 163 30.1
arahy.Tifrunner.gnm1.ann1.59TWC6 Arachis hypogaea HOM05D002890 ORTHO05D009847 3.9e-08 64.3 187 24.6
arahy.Tifrunner.gnm1.ann1.GQ8ZCN Arachis hypogaea HOM05D002890 ORTHO05D009847 3.9e-08 64.3 194 25.3
COL.COLO4_31777 Corchorus olitorius HOM05D002890 ORTHO05D009847 5.1e-08 63.9 186 27.4
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 5.1e-08 63.9 162 27.8
Cc05_g02580 Coffea canephora HOM05D006931 ORTHO05D008782 8.7e-08 63.2 168 27.4
DCAR_019687 Daucus carota HOM05D006931 ORTHO05D008782 1.1e-07 62.8 178 27.0
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 1.1e-07 62.8 197 25.4
Manes.06G016000 Manihot esculenta HOM05D006931 ORTHO05D008782 1.1e-07 62.8 231 25.5
BcaC06g31248 Brassica carinata HOM05D007496 ORTHO05D009479 1.5e-07 62.4 190 25.8
RcHm_v2.0_Chr6g0260391 Rosa chinensis HOM05D007083 ORTHO05D008801 1.5e-07 62.4 41 63.4
CANSAT56G2257 Cannabis sativa HOM05D002890 ORTHO05D009847 3.3e-07 61.2 188 28.2
Lalb_Chr01g0001971 Lupinus albus HOM05D002890 ORTHO05D009847 4.3e-07 60.8 194 24.2
Sc07g0001940 Simmondsia chinensis HOM05D006931 ORTHO05D008782 4.3e-07 60.8 163 27.6
Atru.chr10.2229 Acer truncatum HOM05D002890 ORTHO05D009847 5.6e-07 60.5 197 24.9
PSO384G2302 Papaver somniferum HOM05D007455 ORTHO05D009431 5.6e-07 60.5 232 25.0
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.6e-07 60.5 208 27.4
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.6e-07 60.5 208 27.4
FvH4_1g12100 Fragaria vesca HOM05D006888 ORTHO05D008371 7.3e-07 60.1 198 24.2
FvH4_5g31860 Fragaria vesca HOM05D007358 ORTHO05D009117 7.3e-07 60.1 195 27.2
ATR0829G190 Amborella trichopoda HOM05D007291 ORTHO05D009038 9.6e-07 59.7 171 28.1
FAN19G1999 Fragaria x ananassa HOM05D006888 ORTHO05D008371 9.6e-07 59.7 198 24.2
Glyma.08G199100 Glycine max HOM05D006931 ORTHO05D008782 9.6e-07 59.7 182 26.4
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 9.6e-07 59.7 208 26.4
PSO339G2893 Papaver somniferum HOM05D007455 ORTHO05D009431 1.3e-06 59.3 235 24.7
AUR62036473 Chenopodium quinoa HOM05D007390 ORTHO05D009114 1.6e-06 58.9 167 28.7
Oeu013687.1 Olea europaea HOM05D006858 ORTHO05D008767 1.6e-06 58.9 229 25.3
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 1.6e-06 58.9 239 23.0
TAR624G0355 Trochodendron aralioides HOM05D002890 ORTHO05D009847 1.6e-06 58.9 182 22.5
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 1.6e-06 58.9 183 26.8
MBI05_g20726_MAGBIO Magnolia biondii HOM05D007212 ORTHO05D009094 2.1e-06 58.5 158 27.2
RcHm_v2.0_Chr6g0260761 Rosa chinensis HOM05D007083 ORTHO05D008801 2.1e-06 58.5 38 63.2
FAN19G0192 Fragaria x ananassa HOM05D006888 ORTHO05D008371 2.8e-06 58.2 213 23.9
FAN28G0085 Fragaria x ananassa HOM05D006888 ORTHO05D008371 2.8e-06 58.2 213 23.9
Sopen02g024890 Solanum pennellii HOM05D007956 ORTHO05D010152 2.8e-06 58.2 198 23.7
Atru.chr2.3702 Acer truncatum HOM05D007390 ORTHO05D009114 3.6e-06 57.8 170 29.4
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 3.6e-06 57.8 164 28.0
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 3.6e-06 57.8 239 23.4
Manes.15G146700 Manihot esculenta HOM05D007675 ORTHO05D009699 3.6e-06 57.8 214 27.1
SGA_v2.0_scaffold4G01915 Striga asiatica HOM05D002890 ORTHO05D009847 3.6e-06 57.8 182 21.4
FAN23G2816 Fragaria x ananassa HOM05D006888 ORTHO05D008371 4.8e-06 57.4 212 23.1
Haze_20537 Corylus avellana HOM05D002890 ORTHO05D009847 6.2e-06 57.0 184 25.5
Gorai.002G213900 Gossypium raimondii HOM05D007675 ORTHO05D009699 8.1e-06 56.6 241 27.0


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