Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 0.0e+00 1160.6 688 100.0
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.3e-131 474.6 654 45.9
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.2e-129 465.7 775 44.0
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-95 355.1 353 55.2
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.7e-75 286.2 473 42.3
Aa31LG7G1540 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.1e-72 276.9 209 69.9
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.2e-69 266.9 179 73.2
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.2e-69 266.2 310 78.7
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-68 265.4 187 70.6
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.2e-65 252.7 192 67.2
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.1e-64 250.4 192 67.7
Aa31LG6G10180 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.5e-63 246.9 274 52.2
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.5e-62 243.0 206 63.6
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.7e-58 229.9 215 60.5
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.4e-56 225.3 218 56.9
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.1e-48 199.1 174 59.2
Aa31LG8G17190 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.7e-47 193.0 169 59.8
Aa31LG7G1510 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.1e-44 183.3 169 56.8
Aa31LG7G1580 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.8e-34 149.4 131 60.3
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 2.2e-33 148.3 189 46.0
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 2.2e-33 148.3 189 46.0
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.9e-33 147.9 186 45.2
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 4.9e-33 147.1 188 46.8
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 4.1e-32 144.1 188 46.3
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 7.0e-32 143.3 194 44.3
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 6.0e-31 140.2 174 47.1
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 7.8e-31 139.8 178 45.5
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 2.3e-30 138.3 135 54.8
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.4e-27 129.0 152 46.1
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.3e-27 128.3 128 51.6
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 3.1e-27 127.9 176 43.2
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 1.2e-26 125.9 179 42.5
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 1.3e-25 122.5 174 42.5
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 2.9e-25 121.3 206 39.3
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 4.9e-25 120.6 174 42.0
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 1.4e-24 119.0 177 41.8
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 1.4e-24 119.0 177 41.8
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 1.9e-24 118.6 210 38.6
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 3.2e-24 117.9 122 51.6
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.0e-22 112.8 179 38.0
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 1.7e-22 112.1 145 44.1
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 3.0e-22 111.3 203 38.9
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 3.0e-22 111.3 139 45.3
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 1.1e-21 109.4 145 43.4
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 1.1e-21 109.4 145 43.4
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 1.1e-21 109.4 145 43.4
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 1.5e-21 109.0 173 39.9
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 2.5e-21 108.2 145 44.8
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 3.3e-21 107.8 150 44.7
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 7.3e-21 106.7 130 43.1
Aa31LG7G1570 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.8e-20 104.8 87 66.7
Aa31LG6G9550 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.2e-20 103.6 74 67.6
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 1.4e-19 102.4 189 36.0
Aa31LG6G9560 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.8e-19 100.1 82 68.3
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 6.8e-19 100.1 136 43.4
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.7e-17 95.5 168 42.3
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 2.2e-17 95.1 155 40.6
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 2.2e-17 95.1 123 38.2
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 3.7e-17 94.4 151 41.1
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 1.9e-16 92.0 145 33.1
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 2.4e-16 91.7 169 31.4
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 3.2e-16 91.3 119 36.1
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 1.6e-15 89.0 149 34.2
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.7e-15 88.2 125 34.4
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 2.7e-15 88.2 215 31.2
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 4.6e-15 87.4 166 38.6
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 4.6e-15 87.4 166 38.6
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 6.0e-15 87.0 132 35.6
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 7.8e-15 86.7 144 41.7
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.8e-15 86.7 176 31.8
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 7.8e-15 86.7 136 36.8
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.0e-14 86.3 427 32.6
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 1.3e-14 85.9 147 42.2
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 1.3e-14 85.9 147 42.2
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.3e-14 85.9 118 38.1
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 1.3e-14 85.9 136 36.8
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 1.7e-14 85.5 108 37.0
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.7e-14 85.5 108 37.0
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 1.7e-14 85.5 136 36.8
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.3e-14 85.1 149 32.9
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 2.3e-14 85.1 140 37.9
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 3.0e-14 84.7 136 36.0
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 5.1e-14 84.0 136 36.0
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 5.1e-14 84.0 110 40.9
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 6.6e-14 83.6 108 39.8
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 6.6e-14 83.6 132 36.4
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 8.6e-14 83.2 131 35.9
BraA05t19631Z Brassica rapa HOM05D010480 ORTHO05D003856 1.1e-13 82.8 168 36.9
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 1.1e-13 82.8 105 42.9
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 1.5e-13 82.4 122 36.9
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 1.5e-13 82.4 188 28.2
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 2.5e-13 81.6 228 35.1
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.5e-13 81.6 198 30.3
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 2.5e-13 81.6 149 32.2
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.3e-13 81.3 188 36.2
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 3.3e-13 81.3 142 31.0
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 3.3e-13 81.3 207 33.3
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 3.3e-13 81.3 143 33.6
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 4.3e-13 80.9 217 32.3
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 4.3e-13 80.9 217 32.3
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 4.3e-13 80.9 122 36.9
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 5.6e-13 80.5 228 34.6
Thhalv10003384m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 7.3e-13 80.1 149 34.2
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 7.3e-13 80.1 143 35.7
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 7.3e-13 80.1 100 38.0
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 9.6e-13 79.7 134 33.6
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 9.6e-13 79.7 134 33.6
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 9.6e-13 79.7 206 28.6
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 9.6e-13 79.7 130 33.1
Aa31LG8G17180 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-12 79.3 100 47.0
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.2e-12 79.3 201 29.9
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 1.2e-12 79.3 193 31.6
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 1.6e-12 79.0 155 32.9
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 1.6e-12 79.0 191 29.8
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.6e-12 79.0 163 36.8
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 2.1e-12 78.6 217 31.3
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.1e-12 78.6 119 39.5
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 2.1e-12 78.6 132 34.8
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 2.1e-12 78.6 132 34.8
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.8e-12 78.2 128 34.4
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 2.8e-12 78.2 190 34.7
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.8e-12 78.2 130 33.1
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 3.6e-12 77.8 170 35.9
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 3.6e-12 77.8 139 32.4
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 3.6e-12 77.8 121 36.4
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 3.6e-12 77.8 128 32.8
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 4.7e-12 77.4 130 36.9
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 4.7e-12 77.4 125 31.2
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 6.2e-12 77.0 151 36.4
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 6.2e-12 77.0 197 29.9
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 6.2e-12 77.0 123 35.0
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 6.2e-12 77.0 129 35.7
A05p06650 Brassica napus HOM05D010480 ORTHO05D003856 1.1e-11 76.3 240 31.2
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 1.1e-11 76.3 132 34.8
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 1.8e-11 75.5 201 31.8
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 1.8e-11 75.5 201 31.8
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 1.8e-11 75.5 131 34.4
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 1.8e-11 75.5 124 34.7
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 2.4e-11 75.1 194 31.4
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 3.1e-11 74.7 104 38.5
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 4.0e-11 74.3 173 32.9
CDE02G0413 Ceratophyllum demersum HOM05D040791 ORTHO05D013425 5.2e-11 73.9 323 24.5
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 5.2e-11 73.9 132 30.3
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 8.9e-11 73.2 104 34.6
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 1.2e-10 72.8 108 36.1
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.5e-10 72.4 156 30.8
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 1.5e-10 72.4 132 36.4
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 2.6e-10 71.6 119 35.3
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 3.4e-10 71.2 144 36.8
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 4.4e-10 70.9 105 37.1
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 5.8e-10 70.5 144 32.6
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 7.6e-10 70.1 133 33.1
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 7.6e-10 70.1 124 33.1
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 9.9e-10 69.7 139 30.9
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.2e-09 68.6 120 35.0
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 3.8e-09 67.8 108 36.1
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 3.8e-09 67.8 142 31.0
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 4.9e-09 67.4 135 31.9
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 2.4e-08 65.1 127 37.0
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 3.2e-08 64.7 150 35.3
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 7.1e-08 63.5 104 34.6
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 9.3e-08 63.2 128 33.6
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 9.3e-08 63.2 127 29.1
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.2e-07 62.8 127 29.1
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 1.6e-07 62.4 132 34.8
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 3.5e-07 61.2 106 36.8
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 4.6e-07 60.8 116 29.3
PGSC0003DMG400000107 Solanum tuberosum HOM05D015341 ORTHO05D011718 1.0e-06 59.7 160 31.2
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.7e-06 58.9 108 35.2
BcaC01g00056 Brassica carinata HOM05D010480 ORTHO05D003856 3.0e-06 58.2 124 41.1
Duzib177G0732 Durio zibethinus HOM05D000896 ORTHO05D000594 3.0e-06 58.2 139 26.6
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 3.0e-06 58.2 94 34.0


User provided reference genes

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