Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 6.5e-216 753.8 394 100.0
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 4.1e-178 628.2 397 81.9
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 3.9e-176 621.7 397 80.6
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 1.5e-172 609.8 399 79.2
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.6e-172 609.0 402 80.8
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 7.5e-172 607.4 400 80.5
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 1.5e-167 593.2 392 80.1
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 2.8e-166 589.0 392 79.6
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 1.1e-165 587.0 392 79.6
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 1.8e-165 586.3 392 79.1
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 4.9e-163 578.2 405 76.8
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.1e-162 577.0 405 76.5
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 4.9e-139 498.4 397 68.8
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 6.9e-133 478.0 404 69.8
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 3.4e-124 449.1 369 63.1
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 4.5e-124 448.7 402 61.9
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 5.9e-124 448.4 369 62.9
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 2.5e-122 443.0 371 62.5
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.7e-121 439.5 399 60.2
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 3.0e-120 436.0 370 61.6
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.5e-119 433.7 400 59.5
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 1.7e-118 430.3 402 57.5
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 3.7e-118 429.1 388 60.6
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 6.3e-118 428.3 368 62.2
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 1.8e-117 426.8 387 61.2
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 6.9e-117 424.9 363 62.8
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 3.4e-116 422.5 402 59.0
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 7.7e-116 421.4 399 58.9
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 1.1e-114 417.5 396 57.3
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 3.2e-114 416.0 392 58.7
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 5.5e-114 415.2 397 58.2
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 9.4e-114 414.5 409 55.0
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 4.7e-113 412.1 391 58.3
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 7.9e-113 411.4 412 58.3
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.4e-112 410.6 394 56.9
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.8e-112 410.2 391 57.5
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 1.8e-112 410.2 389 56.3
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 1.8e-112 410.2 402 56.2
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 3.0e-112 409.5 376 57.4
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.7e-110 403.7 391 56.8
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 2.8e-110 402.9 375 60.3
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 4.8e-110 402.1 373 58.7
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 6.3e-110 401.7 359 60.2
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.8e-109 400.2 377 56.2
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.2e-108 397.5 396 53.8
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 1.5e-108 397.1 405 55.1
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 1.0e-107 394.4 407 54.3
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 6.5e-107 391.7 404 56.4
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 9.4e-106 387.9 458 51.1
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.6e-105 387.1 458 51.1
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 3.6e-105 386.0 364 55.5
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 3.0e-104 382.9 402 54.0
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 3.9e-104 382.5 401 53.9
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 8.8e-104 381.3 365 54.0
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 8.8e-104 381.3 377 54.6
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.1e-103 380.9 377 56.2
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 1.5e-103 380.6 364 55.5
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.5e-103 380.6 364 54.7
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 5.7e-103 378.6 393 51.4
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.1e-101 372.9 315 62.9
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 4.1e-101 372.5 382 52.6
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 5.3e-101 372.1 370 53.5
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 7.0e-101 371.7 483 48.2
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.5e-100 369.4 368 53.5
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.0e-99 367.9 387 53.2
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 6.5e-99 365.2 392 51.8
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 6.1e-97 358.6 329 57.8
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 8.8e-96 354.8 340 55.6
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 7.5e-95 351.7 401 50.6
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 4.2e-90 335.9 360 53.1
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 1.5e-87 327.4 395 48.1
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.2e-81 307.8 402 47.0
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.2e-76 291.2 303 53.5
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.7e-75 287.3 279 56.3
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.3e-74 282.7 279 55.9
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 4.3e-74 282.7 366 44.3
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 1.2e-73 281.2 268 54.1
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 1.0e-72 278.1 278 54.0
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.5e-71 274.2 255 56.9
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 6.0e-68 262.3 233 62.2
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 5.2e-64 249.2 336 43.5
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 2.3e-59 233.8 368 41.6
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.8e-49 200.3 388 34.0
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 3.1e-48 196.8 168 57.7
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 3.1e-48 196.8 234 49.1
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 2.0e-47 194.1 393 35.1
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 9.0e-40 168.7 156 59.6
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 4.4e-39 166.4 294 34.0
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 1.4e-37 161.4 203 47.3
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 3.9e-35 153.3 264 33.0
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 3.1e-32 143.7 290 34.1
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 3.4e-23 113.6 132 50.0
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 2.1e-20 104.4 70 77.1
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 1.0e-19 102.1 143 49.7
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 6.7e-19 99.4 96 52.1
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 6.5e-14 82.8 102 45.1
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 1.1e-08 65.5 69 53.6
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 1.4e-08 65.1 304 23.7
BcaC01g03152 Brassica carinata HOM05D007498 ORTHO05D009384 3.1e-08 63.9 62 59.7


User provided reference genes

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