Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 3.9e-103 378.3 209 100.0
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 8.6e-50 201.1 229 55.0
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.1e-49 200.7 229 55.0
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.1e-49 200.7 229 55.0
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.1e-49 200.7 229 55.0
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.6e-48 196.8 232 55.6
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 8.1e-48 194.5 226 54.0
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 8.9e-47 191.0 229 53.7
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 2.7e-43 179.5 234 52.6
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 9.6e-41 171.0 214 52.3
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 9.6e-41 171.0 214 52.3
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 6.2e-40 168.3 216 54.2
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.8e-39 166.8 212 52.4
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 3.1e-39 166.0 228 52.2
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 4.0e-39 165.6 215 53.0
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.0e-38 163.3 229 48.9
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 4.4e-38 162.2 216 51.9
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 3.8e-37 159.1 215 51.2
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 3.2e-36 156.0 192 53.6
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 3.2e-36 156.0 216 51.9
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.1e-35 153.3 215 50.7
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 7.8e-35 151.4 214 50.5
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.3e-34 149.8 216 48.1
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 8.7e-34 147.9 217 48.8
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.5e-33 147.1 187 53.5
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.6e-33 145.2 227 45.8
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.1e-31 141.0 228 46.1
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 8.7e-26 121.3 213 45.1
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.6e-22 109.8 233 41.6
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.1e-20 104.4 228 40.8
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 7.1e-20 101.7 184 44.0
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.1e-19 100.1 216 39.4
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 6.0e-19 98.6 192 43.2
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 1.8e-18 97.1 183 43.2
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 1.8e-18 97.1 183 43.2
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 5.1e-18 95.5 190 41.6
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 6.7e-18 95.1 235 37.9
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 6.7e-18 95.1 161 40.4
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 1.9e-17 93.6 236 32.6
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 3.3e-17 92.8 107 50.5
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 7.4e-17 91.7 121 47.1
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.1e-16 90.1 206 37.9
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.1e-16 90.1 206 37.9
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 2.1e-16 90.1 221 37.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.1e-16 90.1 204 38.2
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.8e-16 89.7 207 37.2
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 2.8e-16 89.7 182 40.1
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 3.7e-16 89.4 206 38.3
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 3.7e-16 89.4 182 42.3
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.8e-16 89.0 206 38.3
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.8e-16 89.0 206 37.9
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.8e-15 87.0 180 40.6
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 1.8e-15 87.0 160 40.0
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.8e-15 87.0 226 36.7
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.4e-15 86.7 193 39.9
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 4.0e-15 85.9 219 38.4
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 4.0e-15 85.9 192 38.5
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 5.3e-15 85.5 195 36.9
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 9.0e-15 84.7 188 37.2
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.2e-14 84.3 178 40.4
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.5e-14 84.0 226 36.3
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.5e-14 84.0 180 43.3
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.5e-14 84.0 112 49.1
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.0e-14 83.6 197 35.0
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.0e-14 83.6 165 39.4
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 2.0e-14 83.6 207 38.6
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.6e-14 83.2 197 40.1
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.6e-14 83.2 195 36.9
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 3.4e-14 82.8 110 45.5
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 5.8e-14 82.0 194 37.6
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 5.8e-14 82.0 193 37.8
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 5.8e-14 82.0 254 34.6
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 5.8e-14 82.0 165 39.4
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 7.6e-14 81.6 207 34.3
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 7.6e-14 81.6 160 42.5
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.0e-13 81.3 184 38.6
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.0e-13 81.3 214 35.5
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.3e-13 80.9 178 37.1
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.2e-13 80.1 198 36.9
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 3.8e-13 79.3 220 34.5
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 3.8e-13 79.3 190 38.9
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 6.5e-13 78.6 181 34.3
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.4e-13 78.2 128 39.8
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 8.4e-13 78.2 144 38.9
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 8.4e-13 78.2 184 36.4
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 8.4e-13 78.2 181 38.1
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.1e-12 77.8 102 48.0
BcaC01g03341 Brassica carinata HOM05D005697 ORTHO05D006951 1.1e-12 77.8 203 39.4
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.1e-12 77.8 172 36.0
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 1.9e-12 77.0 241 31.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 3.2e-12 76.3 179 38.0
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 3.2e-12 76.3 232 28.9
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.2e-12 76.3 191 36.6
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 3.2e-12 76.3 190 35.8
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.2e-12 76.3 190 34.7
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 5.5e-12 75.5 185 36.2
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 9.3e-12 74.7 162 38.3
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 1.6e-11 73.9 209 34.4
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.1e-11 73.6 204 35.3
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.7e-11 73.2 228 32.5
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 3.5e-11 72.8 193 36.3
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.6e-11 72.4 208 31.7
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.6e-11 72.4 204 34.3
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 6.1e-11 72.0 154 39.0
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 6.1e-11 72.0 215 32.6
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 1.3e-10 70.9 201 34.3
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 2.3e-10 70.1 103 46.6
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 2.3e-10 70.1 193 35.8
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 6.7e-10 68.6 179 34.1
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.5e-09 67.4 156 39.1
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.9e-09 67.0 184 32.6
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.5e-09 66.6 235 30.2
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.5e-09 66.6 113 44.2
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 4.3e-09 65.9 182 35.2
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 5.7e-09 65.5 218 30.7
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 1.3e-08 64.3 191 35.1
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.3e-08 64.3 226 32.3
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 3.7e-08 62.8 216 33.8
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 6.3e-08 62.0 182 31.3
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.1e-07 61.2 217 32.3
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.4e-07 60.8 159 37.1
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 1.8e-07 60.5 207 30.4
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 3.1e-07 59.7 192 32.8
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 1.5e-06 57.4 173 32.4
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 3.4e-06 56.2 188 33.0


User provided reference genes

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