Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.6e-36 155.6 80 100.0
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 1.1e-26 122.9 79 83.5
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 3.3e-26 121.3 79 81.0
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 1.3e-25 119.4 76 84.2
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.3e-25 119.4 79 79.7
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 2.8e-25 118.2 79 79.7
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 4.8e-25 117.5 65 86.2
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 6.3e-25 117.1 75 80.0
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 1.4e-24 115.9 76 81.6
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 2.4e-24 115.2 75 82.7
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 3.1e-24 114.8 75 80.0
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 3.1e-24 114.8 75 80.0
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 3.1e-24 114.8 75 80.0
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 5.3e-24 114.0 58 94.8
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 5.3e-24 114.0 75 80.0
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 5.3e-24 114.0 58 94.8
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 5.3e-24 114.0 58 94.8
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 6.9e-24 113.6 65 84.6
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 9.1e-24 113.2 59 91.5
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 1.2e-23 112.8 58 93.1
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 1.2e-23 112.8 58 93.1
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 1.5e-23 112.5 78 73.1
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 2.6e-23 111.7 75 80.0
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 7.7e-23 110.2 78 71.8
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 7.7e-23 110.2 69 78.3
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.3e-22 109.4 63 81.0
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.3e-22 109.4 63 81.0
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 1.7e-22 109.0 73 75.3
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 2.2e-22 108.6 74 71.6
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.2e-22 108.6 65 83.1
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.2e-22 108.6 65 83.1
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 2.9e-22 108.2 64 84.4
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 2.9e-22 108.2 54 94.4
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 2.9e-22 108.2 54 94.4
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 2.9e-22 108.2 54 94.4
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.9e-22 108.2 74 75.7
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 3.8e-22 107.8 66 78.8
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.0e-22 107.5 60 86.7
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 6.5e-22 107.1 60 83.3
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 6.5e-22 107.1 74 73.0
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 8.5e-22 106.7 70 75.7
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 1.1e-21 106.3 60 83.3
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 1.1e-21 106.3 69 76.8
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 1.4e-21 105.9 76 73.7
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.4e-21 105.9 68 76.5
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.9e-21 105.5 60 85.0
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.9e-21 105.5 60 85.0
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.9e-21 105.5 60 85.0
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.9e-21 105.5 60 85.0
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 1.9e-21 105.5 65 78.5
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.9e-21 105.5 72 72.2
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 2.5e-21 105.1 70 72.9
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 2.5e-21 105.1 68 77.9
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 3.2e-21 104.8 73 72.6
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 3.2e-21 104.8 60 83.3
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 4.2e-21 104.4 73 71.2
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 4.2e-21 104.4 66 75.8
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 4.2e-21 104.4 68 76.5
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 4.2e-21 104.4 74 71.6
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 5.5e-21 104.0 74 73.0
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 5.5e-21 104.0 72 75.0
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 7.2e-21 103.6 71 74.6
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 7.2e-21 103.6 67 76.1
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 9.4e-21 103.2 54 90.7
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.2e-20 102.8 75 70.7
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 1.6e-20 102.4 74 70.3
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 1.6e-20 102.4 74 70.3
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 1.6e-20 102.4 75 68.0
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 1.6e-20 102.4 74 70.3
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 2.1e-20 102.1 60 83.3
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 2.7e-20 101.7 75 69.3
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 4.7e-20 100.9 69 71.0
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 4.7e-20 100.9 78 64.1
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 7.9e-20 100.1 64 78.1
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 7.9e-20 100.1 60 76.7
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 1.4e-19 99.4 51 90.2
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 1.4e-19 99.4 65 78.5
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 3.0e-19 98.2 63 77.8
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 3.0e-19 98.2 73 72.6
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 5.1e-19 97.4 68 70.6
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 5.1e-19 97.4 58 77.6
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 6.7e-19 97.1 73 69.9
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 6.7e-19 97.1 80 67.5
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.1e-18 96.3 72 68.1
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 2.0e-18 95.5 65 72.3
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 4.4e-18 94.4 48 89.6
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 7.4e-18 93.6 53 84.9
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 1.3e-17 92.8 78 62.8
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 8.2e-17 90.1 52 84.6
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 8.2e-17 90.1 74 64.9
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.1e-16 89.7 48 85.4
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.1e-16 89.7 54 83.3
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 1.1e-16 89.7 76 60.5
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 3.1e-16 88.2 46 89.1
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 4.1e-16 87.8 94 53.2
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 4.1e-16 87.8 74 62.2
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 4.1e-16 87.8 57 71.9
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 7.0e-16 87.0 47 83.0
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 7.0e-16 87.0 103 50.5
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 9.1e-16 86.7 49 83.7
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 2.0e-15 85.5 72 63.9
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 3.5e-15 84.7 42 92.9
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 4.5e-15 84.3 60 73.3
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.3e-14 82.8 61 72.1
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 2.9e-14 81.6 44 81.8
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.2e-12 76.3 49 75.5
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.6e-12 74.7 49 73.5
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 1.4e-11 72.8 49 73.5
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.1e-10 69.7 37 86.5
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.7e-10 67.4 43 74.4
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.7e-09 64.7 38 73.7
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.7e-09 64.7 38 73.7
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 1.8e-08 62.4 28 92.9
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 2.0e-07 58.9 56 53.6
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 1.7e-06 55.8 69 55.1


User provided reference genes

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