Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 5.4e-113 411.0 205 100.0
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 1.9e-97 359.4 209 88.0
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 1.3e-95 353.2 209 86.6
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 1.3e-95 353.2 209 86.6
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 3.9e-95 351.7 209 86.1
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 5.1e-95 351.3 209 84.7
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 1.5e-94 349.7 209 85.6
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 7.3e-94 347.4 209 85.2
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 1.6e-93 346.3 209 84.7
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 2.8e-93 345.5 209 84.2
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 3.6e-93 345.1 207 84.5
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 8.1e-93 344.0 207 82.6
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 2.6e-91 339.0 211 84.4
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 5.8e-91 337.8 209 84.7
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 7.6e-91 337.4 209 80.4
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 2.3e-87 325.9 210 81.0
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 1.5e-86 323.2 206 81.6
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 2.4e-84 315.8 190 85.3
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 6.4e-82 307.8 205 78.5
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 4.0e-76 288.5 192 79.7
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.5e-65 252.7 211 66.4
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 1.0e-63 247.3 213 64.8
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.3e-63 246.9 211 63.5
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.8e-63 246.5 212 65.6
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 2.3e-63 246.1 219 63.9
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 2.5e-62 242.7 214 62.1
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 3.3e-62 242.3 219 62.6
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 3.3e-62 242.3 219 62.6
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 5.7e-62 241.5 211 63.0
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 5.7e-62 241.5 214 63.6
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 7.4e-62 241.1 211 63.0
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 1.3e-61 240.4 219 62.1
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 2.8e-61 239.2 216 62.5
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 3.7e-61 238.8 211 61.6
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 4.8e-61 238.4 212 64.2
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 4.8e-61 238.4 209 59.8
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.3e-61 238.0 218 61.5
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 8.2e-61 237.7 207 65.2
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.8e-60 236.5 211 62.1
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 2.4e-60 236.1 213 62.9
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 2.4e-60 236.1 225 60.9
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 3.1e-60 235.7 221 61.1
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 4.1e-60 235.3 215 61.4
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 5.3e-60 235.0 213 64.3
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.9e-60 234.6 219 62.1
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 6.9e-60 234.6 210 63.8
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 9.0e-60 234.2 205 63.4
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 1.2e-59 233.8 210 62.4
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 1.2e-59 233.8 209 62.2
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.5e-59 233.4 219 60.7
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.0e-59 233.0 219 60.7
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 4.5e-59 231.9 209 60.8
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 5.9e-59 231.5 209 60.3
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.0e-58 230.7 209 60.3
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 1.3e-58 230.3 172 71.5
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 1.3e-58 230.3 172 71.5
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 1.3e-58 230.3 215 61.4
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.7e-58 229.9 205 61.0
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.2e-58 229.6 221 60.6
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 2.9e-58 229.2 218 59.6
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 5.0e-58 228.4 225 57.3
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 5.0e-58 228.4 151 77.5
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 6.5e-58 228.0 223 60.1
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 2.5e-57 226.1 156 73.7
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 3.2e-57 225.7 217 61.8
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 4.2e-57 225.3 225 58.7
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 9.3e-57 224.2 210 58.6
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 9.3e-57 224.2 233 56.2
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 9.3e-57 224.2 242 55.4
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 9.3e-57 224.2 191 63.4
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 1.6e-56 223.4 211 58.3
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 2.7e-56 222.6 150 74.7
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 3.6e-56 222.2 260 51.9
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.6e-56 221.9 234 55.6
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 6.1e-56 221.5 213 59.2
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 7.9e-56 221.1 214 57.0
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 2.3e-55 219.5 216 57.4
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 2.3e-55 219.5 150 75.3
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 3.9e-55 218.8 218 58.3
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 8.7e-55 217.6 199 62.8
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 1.5e-54 216.9 205 59.5
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.5e-54 216.9 223 57.0
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 1.9e-54 216.5 151 74.2
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 2.5e-54 216.1 222 57.7
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 2.5e-54 216.1 150 72.7
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 3.3e-54 215.7 148 75.7
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 7.4e-54 214.5 262 50.4
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 9.7e-54 214.2 225 56.0
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.3e-53 213.8 225 56.4
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.3e-53 213.8 213 57.3
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 2.2e-53 213.0 180 63.9
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 1.1e-52 210.7 286 46.9
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.8e-52 209.9 130 81.5
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 6.9e-52 208.0 150 74.0
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 6.9e-52 208.0 201 59.7
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 2.6e-51 206.1 216 55.6
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 3.4e-51 205.7 211 55.9
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.0e-50 204.1 193 59.1
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 2.9e-50 202.6 142 73.2
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 2.9e-50 202.6 192 60.9
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 6.5e-50 201.4 213 55.4
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 1.1e-49 200.7 207 57.0
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.4e-49 200.3 120 79.2
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 3.2e-49 199.1 138 73.2
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 4.2e-49 198.7 205 56.1
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 5.5e-49 198.4 190 57.4
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 7.2e-49 198.0 194 57.2
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 1.2e-48 197.2 212 52.4
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 2.7e-48 196.1 179 58.7
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 2.7e-48 196.1 149 67.8
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 1.0e-47 194.1 184 57.6
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.4e-47 193.7 153 66.7
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 6.7e-47 191.4 218 55.0
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.5e-46 190.3 284 42.6
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 2.6e-46 189.5 207 56.5
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.3e-46 189.1 208 52.9
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 4.4e-46 188.7 153 67.3
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 7.4e-46 188.0 211 53.1
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 2.2e-45 186.4 178 59.0
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 8.2e-45 184.5 216 48.6
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 1.5e-43 180.3 189 55.6
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 7.7e-43 177.9 219 46.6
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.2e-41 172.2 144 62.5
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 7.2e-41 171.4 137 65.0
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 2.7e-40 169.5 169 58.6
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.7e-40 169.5 161 56.5
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 3.6e-40 169.1 173 57.8
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 3.6e-40 169.1 170 59.4
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 7.9e-40 167.9 192 53.1
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 8.8e-39 164.5 125 66.4
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.1e-38 164.1 133 61.7
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 4.4e-38 162.2 134 64.9
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 1.8e-36 156.8 118 66.1
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 3.1e-36 156.0 156 58.3
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.1e-36 156.0 162 53.7
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 4.1e-36 155.6 130 60.8
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 5.3e-36 155.2 156 55.8
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.6e-35 153.7 137 59.9
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 5.9e-35 151.8 137 55.5
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.3e-34 150.6 107 72.0
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 8.5e-34 147.9 165 55.2
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 4.7e-32 142.1 110 68.2
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 1.5e-30 137.1 194 45.9
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 1.9e-25 120.2 132 48.5
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.0e-23 114.4 157 43.3
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 3.8e-18 95.9 142 38.0
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 6.5e-18 95.1 114 44.7
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 9.5e-17 91.3 62 75.8
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 8.0e-16 88.2 115 49.6
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.0e-14 83.6 88 52.3
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 1.5e-09 67.4 39 82.1
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 2.3e-07 60.1 40 70.0
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 8.9e-07 58.2 35 80.0


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