Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 8.5e-97 357.1 188 100.0
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 1.8e-59 233.0 185 69.7
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 3.1e-59 232.3 188 71.8
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 3.5e-58 228.8 185 69.2
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 5.9e-58 228.0 185 69.2
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.5e-56 222.6 185 67.6
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 3.3e-56 222.2 183 69.4
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 5.6e-56 221.5 182 70.9
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 1.6e-55 219.9 193 67.4
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 9.8e-53 210.7 175 68.0
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 9.8e-53 210.7 175 68.0
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.7e-52 209.9 176 67.0
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 1.8e-51 206.5 180 64.4
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 1.5e-45 186.8 169 59.8
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 5.8e-45 184.9 179 56.4
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 4.9e-44 181.8 180 60.0
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 1.1e-43 180.6 181 56.9
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 3.2e-43 179.1 183 56.8
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 4.1e-43 178.7 177 56.5
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.2e-42 177.2 181 53.6
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 3.5e-42 175.6 181 53.0
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.0e-42 174.9 181 52.5
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.7e-41 173.3 182 51.6
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.7e-41 173.3 157 57.3
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 6.6e-41 171.4 154 57.8
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 2.5e-40 169.5 166 53.6
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 4.3e-40 168.7 166 53.0
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 5.6e-40 168.3 180 53.3
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 5.6e-40 168.3 171 52.0
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 7.3e-40 167.9 148 59.5
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.8e-39 166.0 141 58.9
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 2.8e-39 166.0 154 57.1
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 3.6e-39 165.6 179 52.0
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 4.7e-39 165.2 119 71.4
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 4.7e-39 165.2 183 50.8
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 6.2e-39 164.9 147 57.8
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 8.1e-39 164.5 144 61.1
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 8.1e-39 164.5 179 51.4
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 8.1e-39 164.5 185 49.7
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.1e-38 164.1 182 52.7
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 1.1e-38 164.1 151 58.3
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.4e-38 163.7 182 52.7
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 2.3e-38 162.9 110 78.2
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.3e-38 162.9 184 52.2
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 3.1e-38 162.5 183 51.4
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 3.1e-38 162.5 189 50.8
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 3.1e-38 162.5 148 58.1
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 3.1e-38 162.5 148 58.1
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 5.2e-38 161.8 183 51.4
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 5.2e-38 161.8 167 56.3
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 6.8e-38 161.4 185 48.6
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 6.8e-38 161.4 179 54.2
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 6.8e-38 161.4 178 51.7
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.2e-37 160.6 110 77.3
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 1.2e-37 160.6 180 51.1
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 1.5e-37 160.2 145 56.6
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 3.4e-37 159.1 183 50.3
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 3.4e-37 159.1 148 56.1
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 7.5e-37 157.9 152 56.6
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.3e-36 157.1 186 47.3
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.3e-36 157.1 179 50.3
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 1.7e-36 156.8 175 50.9
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 1.7e-36 156.8 150 56.7
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 1.7e-36 156.8 179 50.3
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 2.9e-36 156.0 172 51.7
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 2.9e-36 156.0 141 56.0
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 6.4e-36 154.8 177 49.7
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.1e-35 154.1 183 49.7
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 1.4e-35 153.7 167 52.1
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 1.4e-35 153.7 185 48.6
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 4.1e-35 152.1 179 50.3
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 7.1e-35 151.4 145 57.9
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 6.0e-34 148.3 177 48.6
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 6.0e-34 148.3 144 51.4
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 1.3e-33 147.1 177 51.4
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 2.3e-33 146.4 174 49.4
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 1.5e-32 143.7 124 61.3
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 5.6e-32 141.7 162 52.5
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.6e-31 140.2 193 47.2
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 3.6e-31 139.0 105 69.5
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 8.1e-31 137.9 123 59.3
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.4e-30 137.1 169 47.3
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 8.9e-30 134.4 183 45.4
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.2e-29 134.0 126 57.1
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.4e-29 132.5 124 57.3
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 4.9e-28 128.6 172 43.6
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 6.0e-26 121.7 114 56.1
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 3.3e-24 115.9 119 47.9
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 2.2e-20 103.2 138 39.1
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.4e-19 98.6 119 49.6
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 5.4e-19 98.6 118 46.6
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 6.0e-18 95.1 91 51.6
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 7.8e-18 94.7 75 64.0
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 6.6e-17 91.7 123 45.5
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 2.5e-16 89.7 84 52.4
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 5.3e-14 82.0 122 38.5
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 2.0e-13 80.1 78 55.1
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 2.2e-12 76.6 93 43.0
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 4.9e-12 75.5 64 54.7
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 2.4e-11 73.2 176 31.8
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 1.6e-10 70.5 108 38.9


User provided reference genes

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