Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.5e-75 286.2 152 100.0
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 6.7e-68 260.8 154 90.9
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.1e-67 260.0 153 91.5
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 1.9e-67 259.2 149 91.9
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 2.1e-66 255.8 149 89.3
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.1e-65 253.4 149 89.9
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-64 249.6 149 88.6
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.5e-64 249.6 149 88.6
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 2.0e-64 249.2 149 87.9
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 2.6e-64 248.8 153 86.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.5e-64 248.1 149 87.2
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 7.6e-64 247.3 149 87.2
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 2.9e-63 245.4 149 86.6
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.0e-60 236.9 152 81.6
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 3.1e-41 172.2 153 59.5
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 5.3e-41 171.4 152 59.2
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 7.0e-41 171.0 152 58.6
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 7.0e-41 171.0 145 61.4
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 9.1e-41 170.6 153 58.8
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 9.1e-41 170.6 150 56.7
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.2e-40 170.2 152 59.2
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.6e-40 169.9 152 57.2
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 2.6e-40 169.1 152 58.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 2.6e-40 169.1 152 58.6
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 2.6e-40 169.1 152 58.6
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 3.5e-40 168.7 152 58.6
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 4.5e-40 168.3 143 60.8
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 5.9e-40 167.9 143 60.8
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 5.9e-40 167.9 152 57.9
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 5.9e-40 167.9 152 57.9
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 7.7e-40 167.5 152 57.2
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.0e-39 167.2 152 57.2
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.2e-39 166.0 143 60.1
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 2.9e-39 165.6 141 60.3
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.8e-39 165.2 143 60.1
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 3.8e-39 165.2 152 56.6
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 6.5e-39 164.5 152 57.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 6.5e-39 164.5 152 55.3
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 8.5e-39 164.1 139 60.4
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.1e-38 163.7 141 60.3
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.9e-38 162.9 145 59.3
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 1.9e-38 162.9 145 56.6
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.5e-38 162.5 145 57.9
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 2.5e-38 162.5 142 57.7
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.5e-38 162.5 152 56.6
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 4.2e-38 161.8 152 55.9
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 4.2e-38 161.8 152 54.6
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 4.2e-38 161.8 152 55.9
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 7.2e-38 161.0 144 56.2
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 9.4e-38 160.6 145 58.6
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 2.1e-37 159.5 148 56.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.7e-37 159.1 151 53.6
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.7e-37 159.1 143 58.0
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 3.6e-37 158.7 151 53.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 4.7e-37 158.3 141 58.2
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 6.1e-37 157.9 136 57.4
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 6.1e-37 157.9 152 53.3
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 8.0e-37 157.5 145 55.2
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 8.0e-37 157.5 145 55.2
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 1.0e-36 157.1 145 54.5
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 1.0e-36 157.1 145 55.9
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 1.0e-36 157.1 141 55.3
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.8e-36 156.4 143 55.9
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 2.3e-36 156.0 152 53.9
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 3.0e-36 155.6 152 54.6
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 3.0e-36 155.6 140 57.1
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 4.0e-36 155.2 139 56.1
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 5.2e-36 154.8 141 55.3
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 6.7e-36 154.5 152 52.0
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 8.8e-36 154.1 140 58.6
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.2e-35 153.7 144 55.6
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 1.2e-35 153.7 142 55.6
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 3.3e-35 152.1 129 60.5
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 4.4e-35 151.8 143 55.9
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 7.5e-35 151.0 129 58.9
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 9.7e-35 150.6 151 52.3
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-34 149.8 146 54.8
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-34 149.8 159 52.2
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.8e-34 149.1 143 55.9
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.8e-34 149.1 140 54.3
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 4.8e-34 148.3 157 51.6
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 6.3e-34 147.9 142 52.8
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 6.3e-34 147.9 142 52.8
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.1e-33 147.1 153 51.6
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 5.9e-32 141.4 111 61.3
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 7.7e-32 141.0 154 50.0
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 7.7e-32 141.0 152 51.3
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 7.7e-32 141.0 143 54.5
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 5.0e-31 138.3 143 53.8
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 5.0e-31 138.3 145 52.4
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 8.5e-31 137.5 155 50.3
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 1.5e-30 136.7 136 51.5
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 1.5e-30 136.7 109 61.5
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.6e-29 133.3 136 49.3
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 1.6e-29 133.3 140 52.1
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 3.6e-29 132.1 139 52.5
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.0e-28 130.6 123 57.7
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 3.0e-28 129.0 97 73.2
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 4.0e-28 128.6 75 89.3
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 4.0e-28 128.6 192 42.7
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 6.8e-28 127.9 135 48.9
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 9.8e-27 124.0 135 51.1
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.4e-25 120.2 143 48.3
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 3.1e-25 119.0 139 45.3
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 5.4e-25 118.2 111 55.9
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 9.1e-25 117.5 150 42.0
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.6e-24 116.7 150 44.7
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 2.2e-23 112.8 84 67.9
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 3.8e-23 112.1 139 43.9
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 3.2e-22 109.0 140 44.3
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 9.5e-22 107.5 109 55.0
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.4e-20 103.6 104 54.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-18 96.7 65 72.3
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 2.5e-14 82.8 71 59.2
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 2.1e-13 79.7 76 55.3
C05p24340 Brassica napus HOM05D052559 ORTHO05D040828 2.8e-13 79.3 196 37.2
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.0e-12 77.4 149 38.3
BcaC02g08720 Brassica carinata HOM05D028134 ORTHO05D014959 5.4e-09 65.1 41 80.5
BcaC07g40802 Brassica carinata HOM05D000076 ORTHO05D014959 1.6e-08 63.5 41 78.0
BolC5t31167H Brassica oleracea HOM05D052559 ORTHO05D040828 3.0e-07 59.3 99 46.5
CARHR025310 Cardamine hirsuta HOM05D006937 ORTHO05D008747 3.3e-06 55.8 31 93.5
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 4.3e-06 55.5 56 50.0


User provided reference genes

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