Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.3e-268 929.1 449 100.0
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.5e-192 676.4 441 75.1
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 4.4e-192 674.9 459 73.2
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 5.4e-190 667.9 459 72.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.6e-189 666.4 443 74.0
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.6e-189 666.4 443 74.0
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.6e-189 666.4 443 74.0
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 8.6e-188 660.6 451 72.7
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 9.5e-187 657.1 443 72.7
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.2e-186 656.8 443 72.9
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 4.7e-186 654.8 444 72.5
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.4e-176 622.1 473 65.5
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.9e-175 619.0 429 71.8
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 2.2e-151 539.7 482 57.5
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.4e-144 515.8 490 55.7
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.7e-143 513.5 435 58.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 4.9e-143 511.9 495 55.2
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 6.4e-143 511.5 472 55.7
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.1e-142 510.8 437 58.1
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 2.4e-142 509.6 440 57.5
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 4.6e-141 505.4 469 54.8
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 4.6e-141 505.4 463 56.4
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 4.3e-139 498.8 463 55.9
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 2.8e-138 496.1 401 59.9
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 5.3e-137 491.9 500 53.6
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.4e-136 489.2 497 53.7
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 3.4e-136 489.2 387 58.9
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 5.8e-136 488.4 435 55.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 5.8e-136 488.4 480 52.7
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 5.8e-136 488.4 384 60.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 5.8e-136 488.4 503 53.3
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 7.6e-136 488.0 414 58.0
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.9e-136 487.6 479 53.4
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 9.9e-136 487.6 386 59.1
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.2e-135 486.5 493 53.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.8e-135 485.7 479 53.4
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.8e-135 485.7 476 53.8
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 4.9e-135 485.3 482 53.9
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.4e-135 485.0 479 54.3
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 8.4e-135 484.6 378 60.1
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.1e-134 484.2 463 54.9
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.9e-134 483.4 381 61.7
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.9e-134 483.4 381 61.7
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.9e-134 483.4 378 62.2
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.2e-134 482.6 486 53.9
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 9.3e-134 481.1 378 59.5
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.1e-133 479.9 378 62.2
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 2.7e-133 479.6 468 54.7
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 6.0e-133 478.4 488 51.0
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 7.9e-133 478.0 448 54.9
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 2.3e-132 476.5 374 59.6
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 2.3e-132 476.5 483 51.6
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.0e-132 476.1 374 60.7
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.5e-131 473.0 375 59.5
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 3.3e-131 472.6 390 58.2
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.3e-130 470.7 444 54.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.8e-130 469.5 450 53.1
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 6.2e-130 468.4 436 54.6
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 8.1e-130 468.0 432 53.9
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.4e-129 467.2 431 53.8
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 4.0e-129 465.7 428 55.6
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 5.3e-129 465.3 384 59.9
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-128 464.2 378 60.3
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 3.4e-128 462.6 464 51.7
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 3.4e-128 462.6 367 59.4
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 4.5e-128 462.2 377 59.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 9.9e-128 461.1 425 55.5
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 2.2e-127 459.9 367 58.0
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 3.8e-127 459.1 378 59.3
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 4.9e-127 458.8 378 59.3
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 8.4e-127 458.0 424 54.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 2.5e-126 456.4 379 57.8
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 4.2e-126 455.7 403 56.3
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 5.5e-126 455.3 419 53.9
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 2.1e-125 453.4 455 54.3
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.7e-125 453.0 439 52.4
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 8.7e-124 448.0 433 54.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.5e-123 446.4 422 52.4
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 3.3e-123 446.0 468 52.1
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 7.4e-123 444.9 397 55.9
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-122 443.7 422 52.8
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.7e-122 442.6 473 50.3
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.8e-121 440.3 373 57.9
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.4e-121 439.9 464 52.4
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.0e-121 439.1 462 52.6
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.4e-120 436.0 464 52.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.5e-120 435.6 462 52.4
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.0e-119 434.5 445 51.5
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.3e-119 434.1 418 55.3
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 6.5e-119 431.8 430 51.4
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 8.4e-119 431.4 430 51.4
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.6e-117 427.2 445 52.8
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.3e-116 423.3 400 52.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 6.7e-116 421.8 380 56.1
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 3.3e-115 419.5 378 55.0
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.5e-112 410.6 370 53.8
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.9e-111 406.4 372 52.2
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.4e-102 377.5 421 47.0
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.7e-99 364.8 371 47.2
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.4e-83 312.8 467 41.1
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 9.4e-78 295.0 316 51.6
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.6e-72 277.7 252 54.4
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.7e-71 274.2 357 42.0
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 5.2e-68 262.7 352 42.6
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 5.7e-67 259.2 302 47.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.1e-65 255.0 209 58.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 4.3e-62 243.0 393 37.2
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 4.0e-60 236.5 424 36.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 4.7e-53 213.0 390 36.9
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.4e-49 201.4 307 38.8
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 4.9e-42 176.4 217 48.4
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 4.8e-29 133.3 178 44.4
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.8e-26 123.6 431 28.1
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.5e-24 117.1 136 49.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 6.0e-24 116.3 117 52.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.0e-24 116.3 372 28.5
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.1e-21 107.8 330 30.9
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 9.3e-17 92.4 57 68.4
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.6e-14 83.2 264 29.9
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.2e-09 67.4 223 25.6


User provided reference genes

Program Settings