Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G8130 Aethionema arabicum HOM05D004218 ORTHO05D004938 0.0e+00 1346.3 671 100.0
TPR.G13761 Trifolium pratense HOM05D004218 ORTHO05D004938 3.4e-217 758.8 657 58.9
AL1G17150 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 6.6e-168 595.1 374 82.9
AT1G07040 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 6.6e-168 595.1 374 82.9
CARHR006730 Cardamine hirsuta HOM05D004218 ORTHO05D004938 1.5e-167 594.0 374 82.9
Carub.0001s0633 Capsella rubella HOM05D004218 ORTHO05D004938 2.1e-166 590.1 373 81.5
Sp1g05760 Schrenkiella parvula HOM05D004218 ORTHO05D004938 1.4e-165 587.4 374 81.8
Thhalv10007958m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 9.9e-164 581.3 372 82.3
BolC5t29284H Brassica oleracea HOM05D004218 ORTHO05D004938 1.1e-162 577.8 390 77.9
THA.LOC104822930 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 6.0e-161 572.0 371 77.6
A10p05580 Brassica napus HOM05D004218 ORTHO05D004938 8.4e-155 551.6 371 78.4
BraA10t42819Z Brassica rapa HOM05D004218 ORTHO05D004938 8.4e-155 551.6 371 78.4
C05p05130 Brassica napus HOM05D004218 ORTHO05D004938 1.3e-144 517.7 360 75.0
Cfa009032 Carpinus fangiana HOM05D004218 ORTHO05D004938 5.3e-141 505.8 378 70.6
Thhalv10008275m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 5.3e-141 505.8 308 77.6
A07p13210 Brassica napus HOM05D004218 ORTHO05D004938 7.6e-140 501.9 308 76.9
AL1G38490 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 1.3e-139 501.1 304 77.3
AL1G38480 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.2e-139 500.4 304 77.3
BraA07t29093Z Brassica rapa HOM05D004218 ORTHO05D004938 4.9e-139 499.2 308 76.6
BcaC06g35101 Brassica carinata HOM05D004218 ORTHO05D004938 1.1e-138 498.0 308 76.6
BraA07t29096Z Brassica rapa HOM05D004218 ORTHO05D004938 9.3e-138 495.0 303 76.6
Thhalv10007811m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 2.1e-137 493.8 303 76.2
Thhalv10023603m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.0e-136 491.5 303 76.9
Cpa.g.sc5.274 Carica papaya HOM05D004218 ORTHO05D004938 1.3e-136 491.1 378 68.5
PGR119G2468 Punica granatum HOM05D004218 ORTHO05D004938 1.8e-136 490.7 379 68.3
A07p13260 Brassica napus HOM05D004218 ORTHO05D004938 3.0e-136 490.0 303 75.9
AT1G27030 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 5.1e-136 489.2 304 76.6
Thecc.02G354900 Theobroma cacao HOM05D004218 ORTHO05D004938 1.1e-135 488.0 351 71.8
Sp1g21770 Schrenkiella parvula HOM05D004218 ORTHO05D004938 1.5e-135 487.6 302 75.2
Hma1.2p1_1545F.1_g289920 Hydrangea macrophylla HOM05D004218 ORTHO05D004938 1.9e-135 487.3 368 67.7
Thhalv10008276m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 4.8e-134 482.6 310 73.9
Prupe.1G268000 Prunus persica HOM05D004218 ORTHO05D004938 1.4e-133 481.1 373 66.5
Duzib248G0205 Durio zibethinus HOM05D004218 ORTHO05D004938 2.4e-133 480.3 311 75.2
BolC4t27868H Brassica oleracea HOM05D004218 ORTHO05D004938 3.1e-133 479.9 310 72.3
CANSAT64G2557 Cannabis sativa HOM05D004218 ORTHO05D004938 3.1e-133 479.9 382 67.3
AL1G38500 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 4.0e-133 479.6 308 74.0
BcaB06g28798 Brassica carinata HOM05D004218 ORTHO05D004938 4.0e-133 479.6 310 71.9
QL03p065637 Quercus lobata HOM05D004218 ORTHO05D004938 4.0e-133 479.6 373 67.0
Ciclev10031724m.g Citrus clementina HOM05D004218 ORTHO05D004938 5.3e-133 479.2 355 69.9
Lalb_Chr17g0340391 Lupinus albus HOM05D004218 ORTHO05D004938 1.5e-132 477.6 311 74.9
AT1G27020 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 2.6e-132 476.9 308 74.0
Carub.0001s2395 Capsella rubella HOM05D004218 ORTHO05D004938 3.4e-132 476.5 303 74.9
BcaB03g14100 Brassica carinata HOM05D004218 ORTHO05D004938 4.5e-132 476.1 291 76.3
CSS0011407 Camellia sinensis var. sinensis HOM05D004218 ORTHO05D004938 9.9e-132 474.9 326 70.9
TAR374G0431 Trochodendron aralioides HOM05D004218 ORTHO05D004938 1.7e-131 474.2 375 64.3
Hund25269 Selenicereus undatus HOM05D004218 ORTHO05D004938 2.2e-131 473.8 329 73.3
Glyma.02G021600 Glycine max HOM05D004218 ORTHO05D004938 3.8e-131 473.0 312 74.4
MD16G1078500 Malus domestica HOM05D004218 ORTHO05D004938 8.4e-131 471.9 356 68.5
Medtr5g038460 Medicago truncatula HOM05D004218 ORTHO05D004938 1.1e-130 471.5 367 66.8
GSVIVG01020072001 Vitis vinifera HOM05D004218 ORTHO05D004938 1.1e-130 471.5 366 66.9
Actinidia31179 Actinidia chinensis HOM05D004218 ORTHO05D004938 2.5e-130 470.3 362 66.3
TWI18G0549 Tripterygium wilfordii HOM05D004218 ORTHO05D004938 5.5e-130 469.2 374 66.3
CARHR024900 Cardamine hirsuta HOM05D004218 ORTHO05D004938 9.3e-130 468.4 304 74.3
Dinv34202 Davidia involucrata HOM05D004218 ORTHO05D004938 1.2e-129 468.0 306 73.5
Gohir.D13G068200 Gossypium hirsutum HOM05D004218 ORTHO05D004938 1.6e-129 467.6 331 71.3
Lj2g0000105 Lotus japonicus HOM05D004218 ORTHO05D004938 2.1e-129 467.2 324 71.6
Lj6A794T99 Lonicera japonica HOM05D004218 ORTHO05D004938 2.7e-129 466.8 364 66.2
Rhsim12G0057400 Rhododendron simsii HOM05D004218 ORTHO05D004938 2.7e-129 466.8 343 68.5
Gorai.013G077700 Gossypium raimondii HOM05D004218 ORTHO05D004938 3.5e-129 466.5 331 71.3
Phvul.002G066300 Phaseolus vulgaris HOM05D004218 ORTHO05D004938 3.5e-129 466.5 327 70.9
COL.COLO4_07925 Corchorus olitorius HOM05D004218 ORTHO05D004938 6.0e-129 465.7 376 65.4
Thhalv10000255m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 6.0e-129 465.7 310 72.3
Eucgr.G02550 Eucalyptus grandis HOM05D004218 ORTHO05D004938 1.3e-128 464.5 346 67.9
Sp1g21780 Schrenkiella parvula HOM05D004218 ORTHO05D004938 2.3e-128 463.8 304 73.0
Manes.05G096800 Manihot esculenta HOM05D004218 ORTHO05D004938 3.0e-128 463.4 345 69.3
Nn3g17132 Nelumbo nucifera HOM05D004218 ORTHO05D004938 5.1e-128 462.6 386 62.7
RcHm_v2.0_Chr4g0440591 Rosa chinensis HOM05D004218 ORTHO05D004938 6.7e-128 462.2 375 64.8
Ca_04743_v3 Cicer arietinum L. HOM05D004218 ORTHO05D004938 1.9e-127 460.7 309 73.5
DCAR_027386 Daucus carota HOM05D004218 ORTHO05D004938 1.9e-127 460.7 323 70.3
vmacro01228 Vaccinium macrocarpon HOM05D004218 ORTHO05D004938 1.9e-127 460.7 297 74.7
Sp1g21785 Schrenkiella parvula HOM05D004218 ORTHO05D004938 4.3e-127 459.5 310 71.6
C07p19810 Brassica napus HOM05D004218 ORTHO05D004938 7.4e-127 458.8 304 71.7
BolC7t42494H Brassica oleracea HOM05D004218 ORTHO05D004938 7.4e-127 458.8 304 71.7
CARHR024890 Cardamine hirsuta HOM05D004218 ORTHO05D004938 9.6e-127 458.4 303 71.9
VMungo1215G2729 Vigna mungo HOM05D004218 ORTHO05D004938 9.6e-127 458.4 351 66.4
A07p13220 Brassica napus HOM05D004218 ORTHO05D004938 1.6e-126 457.6 304 71.4
BcaB03g11982 Brassica carinata HOM05D004218 ORTHO05D004938 2.1e-126 457.2 297 71.7
A09p40450 Brassica napus HOM05D004218 ORTHO05D004938 2.1e-126 457.2 309 70.6
CiPaw.05G139700 Carya illinoinensis HOM05D004218 ORTHO05D004938 2.1e-126 457.2 290 75.5
BcaB03g14099 Brassica carinata HOM05D004218 ORTHO05D004938 2.8e-126 456.8 307 70.4
BraA09t39542Z Brassica rapa HOM05D004218 ORTHO05D004938 3.7e-126 456.4 309 70.2
FAN22G1204 Fragaria x ananassa HOM05D004218 ORTHO05D004938 4.8e-126 456.1 367 65.1
AUR62026251 Chenopodium quinoa HOM05D004218 ORTHO05D004938 8.2e-126 455.3 301 74.1
FAN17G0090 Fragaria x ananassa HOM05D004218 ORTHO05D004938 8.2e-126 455.3 304 73.0
Sed0012992 Sechium edule HOM05D004218 ORTHO05D004938 3.1e-125 453.4 327 70.6
Aqoxy3G03270 Aquilegia oxysepala HOM05D004218 ORTHO05D004938 6.9e-125 452.2 359 64.1
CAN.G279.12 Capsicum annuum HOM05D004218 ORTHO05D004938 9.0e-125 451.8 373 62.5
PGSC0003DMG400017643 Solanum tuberosum HOM05D004218 ORTHO05D004938 9.0e-125 451.8 377 61.5
BraA08t34706Z Brassica rapa HOM05D004218 ORTHO05D004938 1.2e-124 451.4 305 69.5
Gohir.A13G052700 Gossypium hirsutum HOM05D004218 ORTHO05D004938 2.0e-124 450.7 347 67.7
CsaV3_6G036150 Cucumis sativus L. HOM05D004218 ORTHO05D004938 4.5e-124 449.5 355 66.2
Psat0s3244g0040 Pisum sativum HOM05D004218 ORTHO05D004938 4.5e-124 449.5 382 62.6
Lsat_1_v5_gn_8_54121 Lactuca sativa HOM05D004218 ORTHO05D004938 1.0e-123 448.4 323 67.8
FAN12G1121 Fragaria x ananassa HOM05D004218 ORTHO05D004938 4.9e-123 446.0 382 62.3
A08p27710 Brassica napus HOM05D004218 ORTHO05D004938 6.5e-123 445.7 305 68.9
Peaxi162Scf00209g00319 Petunia axillaris HOM05D004218 ORTHO05D004938 8.4e-123 445.3 301 71.8
Solyc05g007060.4 Solanum lycopersicum HOM05D004218 ORTHO05D004938 1.1e-122 444.9 355 62.5
Sopen05g003030 Solanum pennellii HOM05D004218 ORTHO05D004938 1.1e-122 444.9 329 66.0
Carub.0001s2394 Capsella rubella HOM05D004218 ORTHO05D004938 1.4e-122 444.5 306 70.3
Migut.L01342 Erythranthe guttata HOM05D004218 ORTHO05D004938 2.5e-122 443.7 315 66.7
PSO478G0406 Papaver somniferum HOM05D004218 ORTHO05D004938 2.5e-122 443.7 331 68.0
Potri.008G194800 Populus trichocarpa HOM05D004218 ORTHO05D004938 3.2e-122 443.4 302 73.5
THA.LOC104822097 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 3.2e-122 443.4 308 71.1
EL10Ac6g13149 Beta vulgaris HOM05D004218 ORTHO05D004938 2.7e-121 440.3 385 61.8
MELO3C026498.2 Cucumis melo HOM05D004218 ORTHO05D004938 4.6e-121 439.5 332 67.5
PSO017G6443 Papaver somniferum HOM05D004218 ORTHO05D004938 6.0e-121 439.1 331 67.1
BraA07t29094Z Brassica rapa HOM05D004218 ORTHO05D004938 1.0e-120 438.3 304 69.7
Sabra08G0148000 Salix brachista HOM05D004218 ORTHO05D004938 1.3e-120 438.0 373 63.3
arahy.Tifrunner.gnm1.ann1.VAP5EU Arachis hypogaea HOM05D004218 ORTHO05D004938 2.3e-120 437.2 355 65.1
Cc11_g13440 Coffea canephora HOM05D004218 ORTHO05D004938 2.3e-120 437.2 303 67.3
Sc14g0008380 Simmondsia chinensis HOM05D004218 ORTHO05D004938 2.3e-120 437.2 386 61.9
SGA_v2.0_scaffold302G47864 Striga asiatica HOM05D004218 ORTHO05D004938 5.1e-120 436.0 372 61.0
MSTRG.7824 Avicennia marina HOM05D004218 ORTHO05D004938 6.7e-120 435.6 375 60.0
ATR1120G161 Amborella trichopoda HOM05D004218 ORTHO05D004938 1.1e-119 434.9 373 60.3
AL1G38470 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 1.9e-119 434.1 284 73.6
BcaC06g35098 Brassica carinata HOM05D004218 ORTHO05D004938 3.3e-119 433.3 270 75.6
arahy.Tifrunner.gnm1.ann1.08CHDU Arachis hypogaea HOM05D004218 ORTHO05D004938 2.2e-118 430.6 323 68.1
HanXRQChr08g0209171 Helianthus annuus HOM05D004218 ORTHO05D004938 6.3e-118 429.1 340 63.5
BcaC05g26350 Brassica carinata HOM05D004218 ORTHO05D004938 8.2e-118 428.7 309 69.3
Ah.01g005530 Amaranthus hybridus HOM05D004218 ORTHO05D004938 4.1e-117 426.4 301 69.8
Os10g0463800 Oryza sativa ssp. japonica HOM05D004218 ORTHO05D004938 3.4e-116 423.3 363 59.8
Dinv24956 Davidia involucrata HOM05D004218 ORTHO05D004938 4.5e-116 422.9 327 65.1
BolC5t31091H Brassica oleracea HOM05D004218 ORTHO05D004938 7.7e-116 422.2 291 71.1
C05p23720 Brassica napus HOM05D004218 ORTHO05D004938 1.0e-115 421.8 284 71.5
CDE06G2220 Ceratophyllum demersum HOM05D004218 ORTHO05D004938 8.5e-115 418.7 302 68.2
ClCG08G009010 Citrullus lanatus HOM05D004218 ORTHO05D004938 1.4e-114 417.9 426 55.2
Zm00001eb046510 Zea mays HOM05D004218 ORTHO05D004938 3.2e-114 416.8 301 64.8
BcaC07g39255 Brassica carinata HOM05D004218 ORTHO05D004938 1.2e-113 414.8 304 65.8
ECA236G4940 Erigeron canadensis HOM05D004218 ORTHO05D004938 4.6e-113 412.9 309 67.0
unitig_749.g13251 Utricularia gibba HOM05D004218 ORTHO05D004938 5.7e-111 406.0 346 60.4
HPP92_000630 Vanilla planifolia HOM05D004218 ORTHO05D004938 8.2e-110 402.1 328 59.8
Nitab4.5_0009649g0010 Nicotiana tabacum HOM05D004218 ORTHO05D004938 1.1e-106 391.7 377 57.6
FAN07G0325 Fragaria x ananassa HOM05D004218 ORTHO05D004938 4.2e-106 389.8 269 70.6
SEGI_07096 Sequoiadendron giganteum HOM05D004218 ORTHO05D004938 1.2e-105 388.3 371 54.4
Nitab4.5_0009146g0020 Nicotiana tabacum HOM05D004218 ORTHO05D004938 2.4e-101 374.0 369 56.1
SalBow2G1790 Salvia bowleyana HOM05D004218 ORTHO05D004938 2.4e-101 374.0 299 62.2
SalBow2G2061 Salvia bowleyana HOM05D004218 ORTHO05D004938 2.4e-101 374.0 299 62.2
C08p22580 Brassica napus HOM05D004218 ORTHO05D004938 1.3e-99 368.2 351 54.1
AagrBONN_evm.TU.Sc2ySwM_362.1084 Anthoceros agrestis HOM05D004218 ORTHO05D004938 8.5e-99 365.5 284 62.3
Pp3c14_9960 Physcomitrium patens HOM05D004218 ORTHO05D004938 1.6e-97 361.3 334 55.4
Mapoly0004s0239 Marchantia polymorpha HOM05D004218 ORTHO05D004938 3.6e-97 360.1 343 54.8
Atru.chr11.1849 Acer truncatum HOM05D004218 ORTHO05D004938 2.6e-95 354.0 286 66.4
C07p19800 Brassica napus HOM05D004218 ORTHO05D004938 5.3e-93 346.3 205 79.0
BolC7t42493H Brassica oleracea HOM05D004218 ORTHO05D004938 5.3e-93 346.3 205 79.0
SMO118G0107 Selaginella moellendorffii HOM05D004218 ORTHO05D004938 1.5e-90 338.2 291 58.4
AUR62026441 Chenopodium quinoa HOM05D004218 ORTHO05D004938 2.1e-89 334.3 243 69.1
FvH4_4g31940 Fragaria vesca HOM05D004218 ORTHO05D004938 8.8e-88 328.9 290 60.7
BcaC06g35100 Brassica carinata HOM05D004218 ORTHO05D004938 1.5e-87 328.2 243 66.3
AL8G21080 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.8e-86 323.9 217 71.9
Psat0s917g0040 Pisum sativum HOM05D004218 ORTHO05D004938 1.3e-83 315.1 218 71.1
BcaC05g24668 Brassica carinata HOM05D004218 ORTHO05D002942 6.6e-75 286.2 268 61.2
Haze_12061 Corylus avellana HOM05D004218 ORTHO05D004938 1.2e-71 275.4 233 63.5
Glyma.01G042500 Glycine max HOM05D004218 ORTHO05D004938 3.6e-65 253.8 275 52.4
AL8G21090 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 5.4e-61 240.0 304 45.1
PRCOL_00000833 Prasinoderma coloniale HOM05D004218 ORTHO05D004938 1.3e-59 235.3 284 45.4
BolC8t49896H Brassica oleracea HOM05D004218 ORTHO05D004938 1.7e-59 235.0 150 72.7
C07p19830 Brassica napus HOM05D004218 ORTHO05D004938 6.6e-59 233.0 162 71.0
BolC7t42500H Brassica oleracea HOM05D004218 ORTHO05D004938 9.2e-53 212.6 131 74.0
C07p19850 Brassica napus HOM05D004218 ORTHO05D004938 2.1e-49 201.4 131 71.0
BolC7t42503H Brassica oleracea HOM05D004218 ORTHO05D004938 2.1e-49 201.4 131 71.0
Cre07.g342800 Chlamydomonas reinhardtii HOM05D004218 ORTHO05D004938 8.1e-49 199.5 291 39.5
Lj6A794G97 Lonicera japonica HOM05D004218 ORTHO05D004938 4.0e-48 197.2 195 55.9
C07p19840 Brassica napus HOM05D004218 ORTHO05D004938 2.5e-42 177.9 114 71.1
AUR62026443 Chenopodium quinoa HOM05D004218 ORTHO05D004938 8.4e-30 136.3 82 78.0
MCO10G201 Micromonas commoda HOM05D004218 ORTHO05D004938 3.8e-22 110.9 544 24.4
CAN.G683.6 Capsicum annuum HOM05D004218 ORTHO05D004938 1.1e-21 109.4 105 58.1
BcaB06g26783 Brassica carinata HOM05D005295 ORTHO05D005962 7.4e-18 96.7 81 64.2


User provided reference genes

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