Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 8.4e-177 623.6 325 100.0
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 4.3e-141 505.0 325 78.5
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 2.2e-140 502.7 327 78.3
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 3.7e-140 501.9 325 78.5
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 3.4e-138 495.4 328 77.7
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 5.9e-138 494.6 332 78.3
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 7.7e-138 494.2 323 78.0
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 8.5e-129 464.2 337 74.2
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 7.5e-125 451.1 329 72.6
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 6.5e-121 438.0 332 74.4
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 6.5e-121 438.0 324 70.7
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 8.5e-121 437.6 336 74.1
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 8.5e-121 437.6 336 74.1
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 7.0e-115 417.9 337 68.5
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.0e-113 414.1 334 69.2
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 5.4e-99 365.2 323 64.4
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 8.0e-95 351.3 324 61.4
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 8.0e-95 351.3 322 62.4
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 2.3e-94 349.7 325 60.0
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 6.8e-94 348.2 297 64.6
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 8.9e-94 347.8 312 60.6
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.0e-93 346.7 306 62.1
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 2.0e-93 346.7 306 61.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 6.4e-92 341.7 321 59.2
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 8.3e-92 341.3 233 71.7
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 4.1e-91 339.0 319 59.2
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 5.4e-91 338.6 239 70.3
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 7.0e-91 338.2 306 60.5
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 7.0e-91 338.2 333 57.4
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.6e-90 337.0 240 70.0
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 7.8e-90 334.7 229 72.1
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.0e-89 334.3 232 72.4
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 1.3e-89 334.0 308 59.1
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.3e-89 333.2 274 63.5
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 2.3e-89 333.2 272 62.9
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 3.0e-89 332.8 292 60.3
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 3.9e-89 332.4 267 63.3
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 5.0e-89 332.0 320 60.3
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 1.5e-88 330.5 307 58.3
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.9e-88 330.1 327 58.1
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.3e-88 329.3 306 61.8
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 4.3e-88 328.9 288 60.1
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 1.6e-87 327.0 230 69.6
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 3.6e-87 325.9 239 65.7
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 4.7e-87 325.5 239 65.7
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 4.7e-87 325.5 245 67.3
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 6.2e-87 325.1 352 55.1
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.1e-86 324.3 320 57.8
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 2.6e-85 319.7 335 56.4
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 3.4e-85 319.3 290 61.4
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 9.8e-85 317.8 314 58.3
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.3e-84 317.4 329 57.1
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.7e-84 315.8 314 57.6
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 4.9e-84 315.5 247 63.2
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.1e-83 314.3 307 55.7
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.4e-83 313.9 245 64.5
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 1.4e-83 313.9 314 57.3
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 4.1e-83 312.4 242 62.4
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 9.2e-83 311.2 231 66.7
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 9.2e-83 311.2 315 54.6
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 2.7e-82 309.7 241 64.7
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.5e-82 309.3 318 53.8
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 4.6e-82 308.9 335 54.0
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 2.5e-80 303.1 234 65.0
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 4.3e-80 302.4 314 54.8
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 4.3e-80 302.4 224 67.4
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.6e-80 302.0 259 60.6
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.3e-80 301.6 266 59.4
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 9.5e-80 301.2 227 65.2
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.5e-80 301.2 259 60.6
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 4.7e-79 298.9 229 64.2
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 4.0e-78 295.8 233 63.5
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 4.0e-78 295.8 216 66.7
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 6.8e-78 295.0 292 57.2
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 1.5e-77 293.9 225 66.7
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.6e-77 291.6 292 55.5
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 1.7e-76 290.4 223 63.2
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 2.2e-76 290.0 246 59.8
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.9e-76 289.7 248 59.3
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 2.9e-76 289.7 238 61.8
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.8e-76 289.3 293 52.6
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 4.9e-76 288.9 227 61.2
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 1.4e-75 287.3 223 63.2
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.4e-75 287.3 229 61.1
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 2.4e-75 286.6 268 59.3
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 7.1e-75 285.0 228 64.0
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.6e-74 283.9 316 49.7
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 2.1e-74 283.5 235 60.0
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 4.6e-74 282.3 239 60.3
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 7.8e-74 281.6 228 63.2
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.3e-73 280.8 315 52.1
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 2.3e-73 280.0 215 62.8
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.3e-73 280.0 367 46.0
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.9e-73 279.3 330 49.4
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 3.6e-71 272.7 326 48.2
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 8.9e-70 268.1 321 48.0
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 4.4e-69 265.8 213 64.3
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 5.8e-69 265.4 193 67.9
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 9.9e-69 264.6 274 54.7
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 3.9e-65 252.7 297 49.8
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 8.7e-65 251.5 228 55.7
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 9.6e-64 248.1 272 49.3
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.1e-56 224.6 203 57.1
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 4.8e-55 219.2 224 54.5
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 4.8e-55 219.2 216 53.2
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.8e-54 217.2 183 60.7
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.4e-54 216.9 212 51.9
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.0e-54 216.1 200 57.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 4.9e-52 209.1 318 43.7
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 8.4e-52 208.4 143 72.0
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 3.5e-50 203.0 162 64.8
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 9.6e-48 194.9 242 45.5
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.0e-46 189.5 214 46.7
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 3.4e-45 186.4 236 48.7
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.7e-41 171.8 213 45.5
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.7e-41 171.8 213 45.5
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.5e-40 171.0 223 43.5
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 4.3e-40 169.5 241 43.6
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.5e-35 153.7 200 42.0
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 3.0e-25 120.2 79 73.4
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 6.7e-25 119.0 184 40.2
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 8.8e-25 118.6 95 64.2
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 5.7e-24 115.9 214 35.0
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 4.1e-14 83.2 80 56.2
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 2.6e-08 63.9 237 21.5


User provided reference genes

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