Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G7560 Aethionema arabicum HOM05D000693 ORTHO05D038188 2.3e-60 235.3 117 100.0
Aa31LG7G7550 Aethionema arabicum HOM05D000693 ORTHO05D038188 3.3e-30 135.2 101 70.3
Sopen02g009840 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-12 75.1 46 78.3
Sopen01g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-12 74.7 46 76.1
Sopen06g007920 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-12 74.7 46 76.1
FvH4_5g22951 Fragaria vesca HOM05D000006 ORTHO05D000001 3.5e-08 62.0 45 60.0
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 59.7 41 63.4
CSS0018716 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 59.7 41 63.4
CSS0006413 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 3.9e-07 58.5 41 61.0
Sopen01g013490 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 58.5 42 54.8
ECA234G4446 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-07 57.8 46 56.5
FvH4_4g30272 Fragaria vesca HOM05D000006 ORTHO05D000001 8.6e-07 57.4 41 58.5
FvH4_6g26671 Fragaria vesca HOM05D000006 ORTHO05D000001 8.6e-07 57.4 41 58.5
Lalb_Chr01g0003981 Lupinus albus HOM05D000006 ORTHO05D000001 8.6e-07 57.4 44 54.5
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 8.6e-07 57.4 40 57.5
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-07 57.4 41 56.1
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-06 57.0 41 58.5
Sopen09g029100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.0 40 65.0
Sopen12g026370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.0 40 65.0
CSS0018459 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 1.5e-06 56.6 41 58.5
CSS0023125 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 56.6 44 52.3
CSS0023360 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 1.5e-06 56.6 41 61.0
CSS0025135 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 56.6 43 58.1
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 56.6 46 56.5
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 56.6 44 54.5
TPR.G7919 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-06 56.6 44 59.1
TPR.G9933 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-06 56.6 44 56.8
RcHm_v2.0_Chr3g0453691 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 40 57.5
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 41 56.1
RcHm_v2.0_Chr5g0063381 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 41 56.1
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 40 55.0
Sopen11g010280 Solanum pennellii HOM05D000006 ORTHO05D000001 1.9e-06 56.2 44 56.8
FvH4_1g19622 Fragaria vesca HOM05D000006 ORTHO05D000001 2.5e-06 55.8 36 66.7
FvH4_3g12332 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-06 55.8 41 53.7
FvH4_6g41872 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-06 55.8 41 56.1
Hma1.2p1_0774F.1_g216330 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 2.5e-06 55.8 41 58.5
Hma1.2p1_0774F.1_g216335 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 2.5e-06 55.8 41 58.5
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-06 55.8 41 58.5
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.8 41 53.7
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.8 44 54.5
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.8 44 54.5
Sopen01g014650 Solanum pennellii HOM05D000004 ORTHO05D000001 3.3e-06 55.5 45 48.9
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.5 44 52.3
Sopen06g019130 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.5 44 52.3
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.5 44 52.3
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.5 44 52.3
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.5 44 52.3
CSS0041070 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.3e-06 55.1 41 58.5
DCAR_026535 Daucus carota HOM05D000693 ORTHO05D002444 4.3e-06 55.1 53 47.2
RcHm_v2.0_Chr3g0451301 Rosa chinensis HOM05D000006 ORTHO05D000001 4.3e-06 55.1 41 51.2
CSS0037072 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 5.6e-06 54.7 41 58.5
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.6e-06 54.7 41 58.5
CAN.G284.2 Capsicum annuum HOM05D000006 ORTHO05D000001 7.3e-06 54.3 44 47.7
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-06 54.3 44 52.3
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-06 54.3 44 52.3
SHI05324 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-06 54.3 41 56.1
SHI13138 Sapria himalayana HOM05D000006 ORTHO05D000001 7.3e-06 54.3 41 56.1
FvH4_7g21181 Fragaria vesca HOM05D000002 ORTHO05D000001 9.5e-06 53.9 37 62.2
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.5e-06 53.9 41 61.0
RcHm_v2.0_Chr4g0409141 Rosa chinensis HOM05D000002 ORTHO05D000001 9.5e-06 53.9 41 56.1


User provided reference genes

Program Settings